Artigos completos publicados em periódicos

Legenda Qualis:

• Publicação para a qual o nome exato do Qualis foi identificado: Qualis <estrato>
• Publicação para a qual um nome similar (não exato) do Qualis foi identificado: Qualis <estrato> (nome similar)
• Publicação para a qual nenhum nome do Qualis foi identificado: Qualis não identificado (nome usado na busca)

2014

12.	DA SILVA, SABRINA DANIELA ; ALAOUI-JAMALI, MOULAY A. ; Soares, Fernando Augusto ; Carraro, Dirce Maria ; Brentani, Helena Paula ; HIER, MICHAEL ; ROGATTO, SILVIA REGINA ; KOWALSKI, LUIZ PAULO. TWIST1 is a molecular marker for a poor prognosis in oral cancer and represents a potential therapeutic target. Cancer (Print). v. 120, p. 352-362, 2014. Qualis: A1
13.	DE ABREU MEIRELES, DIOGO ; MATEUS DOMINGOS, RENATO ; de SOUZA, Robson Francisco ; SOARES NETTO, LUIS EDUARDO. Distribution and Classification of Cys-Based Proteins of the Ohr/OsmC Family. FREE RADICAL BIOLOGY AND MEDICINE. v. 76, p. S142, 2014. Qualis: A1 (FREE RADICAL BIOLOGY & MEDICINE)
14.	DE ARAÚJO, ÉRICA SARA SOUZA ; MARCHI, FABIO ALBUQUERQUE ; RODRIGUES, TATIANE CRISTINA ; VIEIRA, HENRIQUE CURSINO ; KUASNE, HELLEN ; ACHATZ, MARIA ISABEL WADDINGTON ; MOREDO, LUCIANA FACURE ; DE SÁ, BIANCA COSTA SOARES ; NETO, JOÃO PEREIRA DUPRAT ; Brentani, Helena Paula ; Rosenberg, Carla ; Carraro, Dirce Maria ; KREPISCHI, ANA CRISTINA VICTORINO. Genome-wide DNA methylation profile of leukocytes from melanoma patients with and without CDKN2A mutations. Experimental and Molecular Pathology (Print). v. 97, p. 425-432, 2014. Qualis: A2
15.	de Setta, Nathalia ; MONTEIRO-VITORELLO, CLÁUDIA BARROS ; METCALFE, CUSHLA JANE ; CRUZ, GUILHERME MARCELO ; DEL BEM, LUIZ EDUARDO ; Vicentini, Renato ; NOGUEIRA, FÁBIO TEBALDI ; CAMPOS, ROBERTA ALVARES ; NUNES, SIDENY LIMA ; TURRINI, PAULA CRISTINA ; VIEIRA, ANDREIA PRATA ; OCHOA CRUZ, EDGAR ANDRÉS ; CORRÊA, TATIANA CAROLINE ; HOTTA, CARLOS TAKESHI ; de Mello Varani, Alessandro ; VAUTRIN, SONIA ; DA TRINDADE, ADILSON SILVA ; DE MENDONÇA VILELA, MARIANE ; LEMBKE, CAROLINA GIMILIANI ; SLUYS MAV.. Building the sugarcane genome for biotechnology and identifying evolutionary trends. BMC GENOMICS. v. 15, p. 540, 2014. Qualis: A2
16.	DEL VALLE, PAULO ROBERTO ; MILANI, CINTIA ; Brentani, Maria Mitzi ; Katayama, Maria Lucia Hirata ; LYRA, EDUARDO CARNEIRO DE ; Carraro, Dirce Maria ; BRENTANI, HELENA ; Puga, Renato ; LIMA, LEANDRO A. ; ROZENCHAN, PATRICIA BORTMAN ; NUNES, BÁRBARA DOS SANTOS ; GÓES, JOÃO CARLOS GUEDES SAMPAIO ; Folgueira, Maria Aparecida Azevedo Koike. Transcriptional profile of fibroblasts obtained from the primary site, lymph node and bone marrow of breast cancer patients. Genetics and Molecular Biology (Impresso). v. 37, p. 480-489, 2014. Qualis: A4
17.	DEOCESANO-PEREIRA, C. ; AMARAL, M. S. ; PARREIRA, K. S. ; AYUPE, A. C. ; JACYSYN, J. F. ; AMARANTE-MENDES, G. P. ; REIS, E. M. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Long non-coding RNA INXS is a critical mediator of BCL-XS induced apoptosis. Nucleic Acids Research. v. 42, p. 8343-8355, 2014. Qualis: A1
18.	DO NASCIMENTO, NAÍLA C ; DOS SANTOS, ANDREA P ; CHU, YUEFENG ; GUIMARAES, ANA ; BAIRD, AUBREY N ; WEIL, ANN B ; Messick, Joanne B. Microscopy and genomic analysis of Mycoplasma parvum strain Indiana. Veterinary Research. v. 45, p. 86, 2014. Qualis: A1
19.	DUARTE, NUBIA E. ; GIOLO, SUELY R. ; PEREIRA, ALEXANDRE C. ; DE ANDRADE, MARIZA ; SOLER, JÚLIA P.. Using the theory of added-variable plot for linear mixed models to decompose genetic effects in family data. Statistical applications in genetics and molecular biology. v. 13, p. 359-378, 2014. Qualis: B1
20.	FERREIRA, ARI J. S. ; SIAM, RANIA ; Setubal, João C. ; MOUSTAFA, AHMED ; SAYED, AHMED ; CHAMBERGO, FELIPE S. ; DAWE, ADAM S. ; GHAZY, MOHAMED A. ; SHARAF, HAZEM ; OUF, AMGED ; ALAM, INTIKHAB ; ABDEL-HALEEM, ALYAA M. ; LEHVASLAIHO, HEIKKI ; RAMADAN, EMAN ; ANTUNES, ANDRÉ ; STINGL, ULRICH ; ARCHER, JOHN A. C. ; JANKOVIC, BORIS R. ; SOGIN, MITCHELL ; BAJIC, VLADIMIR B.. Core Microbial Functional Activities in Ocean Environments Revealed by Global Metagenomic Profiling Analyses. Plos One. v. 9, p. e97338, 2014. Qualis: A1
21.	FERREIRA, S. C. ; DE ALMEIDA-NETO, C. ; NISHIYA, A. S. ; DI-LORENZO-OLIVEIRA, C. ; FERREIRA, J. E. ; ALENCAR, C. S. ; LEVI, J. E. ; SALLES, N. A. ; MENDRONE-JUNIOR, A. ; SABINO, E. C.. Prevalence of Treponema pallidum DNA among blood donors with two different serologic tests profiles for syphilis in São Paulo, Brazil. Vox Sanguinis (Basel. 1956). v. 106, p. 376-378, 2014. Qualis: Não identificado (1956))
22.	FERREIRA, S. C. ; DE ALMEIDA-NETO, C. ; NISHIYA, A. S. ; OLIVEIRA, C. D. L. ; FERREIRA, J. E. ; ALENCAR, C. S. ; LEVI, J. E. ; SALLES, N. A. ; MENDRONE JR., A. ; SABINO, E. C.. Demographic, risk factors and motivations among blood donors with reactive serologic tests for syphilis in São Paulo, Brazil. Transfusion Medicine (Print). v. 24, p. 169-175, 2014. Qualis: B1
23.	FIGUEIREDO, NANCY BUENO ; CESTARI, SÍLVIA HELENA ; CONDE, SANDRO JOSÉ ; LUVIZOTTO, RENATA AZEVEDO MELO ; DE SIBIO, MARIA TERESA ; PERONE, DENISE ; KATAYAMA, MARIA LÚCIA HIRATA ; Carraro, Dirce Maria ; Brentani, Helena Paula ; Brentani, Maria Mitzi ; NOGUEIRA, CÉLIA REGINA. Estrogen-Responsive Genes Overlap with Triiodothyronine-Responsive Genes in a Breast Carcinoma Cell Line. The Scientific World Journal. v. 2014, p. 1-7, 2014. Qualis: B1
24.	Florence, G. ; Kurths, J. ; Machado, B. S. ; Fonoff, E. T. ; Cerdeira, H. A. ; Teixeira, M. J. ; Sameshima, K.. Neuronal excitability level transition induced by electrical stimulation. The European Physical Journal. Special Topics. v. 223, p. 2913-2922, 2014. Qualis: Não identificado (SPECIAL TOPICS)
25.	FRAGOSO, TIAGO M. ; GIOLO, SUELY R. ; PEREIRA, ALEXANDRE C. ; DE ANDRADE, MARIZA ; SOLER, JULIA M. P.. Using Item Response Theory to Model Multiple Phenotypes and Their Joint Heritability in Family Data. Genetic Epidemiology (Print). v. 38, p. n/a-n/a, 2014. Qualis: A3
26.	Fujita, André; TAKAHASHI, DANIEL Y. ; PATRIOTA, ALEXANDRE G. ; Sato, João R.. A non-parametric statistical test to compare clusters with applications in functional magnetic resonance imaging data. Statistics in Medicine (Print). v. 33, p. 4949-4962, 2014. Qualis: A2
27.	GAO, G. ; VIBRANOVSKI, M. D. ; ZHANG, L. ; LI, Z. ; LIU, M. ; ZHANG, Y. E. ; LI, X. ; ZHANG, W. ; FAN, Q. ; VANKUREN, N. W. ; LONG, M. ; WEI, L.. A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster. GENOME RESEARCH. v. 24, p. 629-638, 2014. Qualis: A1
28.	GUIMARAES, A. M. S.; Santos, A. P. ; TIMENETSKY, J. ; BOWER, L. P. ; STRAIT, E. ; MESSICK, J. B.. Identification of Mycoplasma suis antigens and development of a multiplex microbead immunoassay. Journal of Veterinary Diagnostic Investigation. v. 26, p. n/a, 2014. Qualis: A3
29.	Guimaraes, Ana M. S.; Santos, Andrea P. ; DO NASCIMENTO, NAÍLA C. ; Timenetsky, Jorge ; Messick, Joanne B.. Comparative Genomics and Phylogenomics of Hemotrophic Mycoplasmas. Plos One. v. 9, p. e91445, 2014. Qualis: A1
30.	GUIMARÃES, LEYSIMAR R. P. ; SOLER, JULIA M. P. ; LIMA, GIUSEPPINA P. P. ; PAVAN, MARCELO A.. Polyamines in tomato plants grown during an incidence of tospovirus exposure. European Journal of Plant Pathology. v. 140, p. 701-709, 2014. Qualis: A2
31.	IONESCU, M. ; ZAINI, Paulo A. ; BACCARI, C. ; Tran, S. ; da Silva, Aline M ; LINDOW, S. E.. Xylella fastidiosa outer membrane vesicles modulate plant colonization by blocking attachment to surfaces. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. v. 111, p. E3910-E3918, 2014. Qualis: A1
32.	Iyer, L. M. ; ZHANG, D. ; de Souza, R. F. ; PUKKILA, P. J. ; RAO, A. ; Aravind, L.. Lineage-specific expansions of TET/JBP genes and a new class of DNA transposons shape fungal genomic and epigenetic landscapes. Proceedings of the National Academy of Sciences of the United States of America. v. 111, p. 1676-1683, 2014. Qualis: A1
33.	Kwissa, Marcin ; NAKAYA, HELDER I. ; ONLAMOON, NATTAWAT ; Wrammert, Jens ; Villinger, Francois ; PERNG, GUEY CHUEN ; YOKSAN, SUTEE ; PATTANAPANYASAT, KOVIT ; CHOKEPHAIBULKIT, KULKANYA ; Ahmed, Rafi ; Pulendran, Bali. Dengue Virus Infection Induces Expansion of a CD14+CD16+ Monocyte Population that Stimulates Plasmablast Differentiation. Cell Host & Microbe. v. 16, p. 1-13, 2014. Qualis: A1
34.	LOPES, FABRÍCIO M. ; RAY, SHUBHRA SANKAR ; HASHIMOTO, RONALDO F. ; CESAR, ROBERTO M.. Entropic Biological Score: a cell cycle investigation for GRNs inference. Gene (Amsterdam). v. 541, p. 129-137, 2014. Qualis: A4
35.	LOUREIRO, PAULA ; ALMEIDA-NETO, CESAR DE ; PROIETTI, ANNA BÁRBARA CARNEIRO ; Capuani, Ligia ; GONÇALEZ, THELMA TEREZINHA ; OLIVEIRA, CLAUDIA DI LORENZO DE ; Leão, Silvana Carneiro ; LOPES, MARIA INÊS ; Sampaio, Divaldo ; Patavino, Giuseppina Maria ; Ferreira, João Eduardo ; Blatyta, Paula Fraiman ; LOPES, MARIA ESTHER DUARTE ; MENDRONE-JUNIOR, ALFREDO ; Salles, Nanci Alves ; KING, MELISSA ; MURPHY, EDWARD ; Busch, Michael ; Custer, Brian ; Sabino, Ester Cerdeira. Contribution of the Retrovirus Epidemiology Donor Study (REDS) to research on blood transfusion safety in Brazil. Revista Brasileira de Hematologia e Hemoterapia. v. 36, p. 152-158, 2014. Qualis: C
36.	MACIEL, C. ; Fujita, Andre ; GUERONI, D. I. ; RAMOS, A. D. ; CAPURRO, M. L. ; SA-NUNES, A.. Evans blue as a simple method to discriminate mosquitoes feeding choice on small laboratory animals. Plos One. v. 9, p. e110551, 2014. Qualis: A1
37.	MCGRATH, LAUREN M. ; YU, DONGMEI ; MARSHALL, CHRISTIAN ; DAVIS, LEA K. ; THIRUVAHINDRAPURAM, BHOOMA ; LI, BINGBIN ; Cappi, Carolina ; GERBER, GLORIA ; WOLF, AARON ; SCHROEDER, FREDERICK A. ; OSIECKI, LISA ; O'DUSHLAINE, COLM ; KIRBY, ANDREW ; ILLMANN, CORNELIA ; HADDAD, STEPHEN ; GALLAGHER, PATIENCE ; FAGERNESS, JESEN A. ; BARR, CATHY L. ; BELLODI, LAURA ; SAMAIA, H. B.. Copy Number Variation in Obsessive-Compulsive Disorder and Tourette Syndrome: A Cross-Disorder Study. Journal of the American Academy of Child and Adolescent Psychiatry. v. 53, p. 910-919, 2014. Qualis: A1
38.	MEDINA-ACOSTA, ENRIQUE ; NAKAYA, HELDER TAKASHI IMOTO ; PONTILLO, ALESSANDRA ; DE SOUZA CAMPOS FERNANDES, REGINA CÉLIA. Genetic Control of Immune Response and Susceptibility to Infectious Diseases. BioMed Research International. v. 2014, p. 1-3, 2014. Qualis: A3
39.	MENCK, CARLOS FM; MUNFORD, VERIDIANA. DNA repair diseases: what do they tell us about cancer and aging?. Genetics and Molecular Biology (Impresso). v. 37, p. 220-233, 2014. Qualis: A4
40.	MOLINA, E. ; Fujita, André ; SOGAYAR, Mari Cleide ; DEMASI, Marcos Angelo A.. A quantitative and humane tail bleeding assay for efficacy evaluation of antihaemophilic factors in haemophilia A mice. Haemophilia (Oxford. Print). v. 20, p. 392-398, 2014. Qualis: Não identificado (PRINT))
41.	Nishiyama, Milton Yutaka ; FERREIRA, SAVIO SIQUEIRA ; TANG, PEI-ZHONG ; BECKER, SCOTT ; PÖRTNER-TALIANA, ANTJE ; SOUZA, GLAUCIA MENDES. Full-Length Enriched cDNA Libraries and ORFeome Analysis of Sugarcane Hybrid and Ancestor Genotypes. Plos One. v. 9, p. e107351, 2014. Qualis: A1
42.	OH, JASON Z. ; Ravindran, Rajesh ; CHASSAING, BENOIT ; CARVALHO, FREDERIC A. ; MADDUR, MOHAN S. ; BOWER, MAUREEN ; HAKIMPOUR, PAUL ; GILL, KIRAN P. ; NAKAYA, HELDER I. ; YAROVINSKY, FELIX ; SARTOR, R. BALFOUR ; GEWIRTZ, ANDREW T. ; Pulendran, Bali. TLR5-Mediated Sensing of Gut Microbiota Is Necessary for Antibody Responses to Seasonal Influenza Vaccination. Immunity (Cambridge, Mass.). v. 41, p. 478-492, 2014. Qualis: A1
43.	Oliveira, P.T.M. ; de Andrade, M. ; KRIEGER, J. E. ; SOLER, J. M. P.. Genetic algorithm for mapping epistasis in controlled crosses. Revista Brasileira de Biometria. v. 32, p. 143-157, 2014.Qualis: C
44.	POO, Y. S. ; Nakaya, H. ; GARDNER, J. ; LARCHER, T. ; SCHRODER, W. A. ; LE, T. T. ; MAJOR, L. D. ; SUHRBIER, A.. CCR2 Deficiency Promotes Exacerbated Chronic Erosive Neutrophil-Dominated Chikungunya Virus Arthritis. Journal of Virology (Print). v. 10, p. 1000, 2014. Qualis: A1
45.	POO, YEE SUAN ; RUDD, PENNY A. ; Gardner, Joy ; WILSON, JANE A. C. ; LARCHER, THIBAUT ; COLLE, MARIE-ANNE ; LE, THUY T. ; Nakaya, Helder I. ; WARRILOW, DAVID ; ALLCOCK, RICHARD ; BIELEFELDT-OHMANN, HELLE ; SCHRODER, WAYNE A. ; KHROMYKH, ALEXANDER A. ; LOPEZ, JOSÉ A. ; Suhrbier, Andreas. Multiple Immune Factors Are Involved in Controlling Acute and Chronic Chikungunya Virus Infection. PLoS Neglected Tropical Diseases (Online). v. 8, p. e3354, 2014. Qualis: A1
46.	PURWANTINI, ENDANG ; TORTO-ALALIBO, TRUDY ; LOMAX, JANE ; SETUBAL, JOãO C. ; TYLER, BRETT M. ; MUKHOPADHYAY, BISWARUP. Genetic resources for methane production from biomass described with the Gene Ontology. Frontiers in Microbiology (Online). v. 5, p. 634, 2014. Qualis: A1
47.	RIBEIRO, LILIANE FC ; DE LUCAS, ROSYMAR C ; VITCOSQUE, GABRIELA L ; RIBEIRO, LUCAS F ; WARD, RICHARD J ; RUBIO, MARCELO V ; DAMÁSIO, ANDRE RL ; SQUINA, FABIO M ; GREGORY, REBECCA C ; WALTON, PAUL H ; JORGE, JOÃO A ; PRADE, ROLF A ; BUCKERIDGE, MARCOS S ; POLIZELI, MARIA DE. A novel thermostable xylanase GH10 from Malbranchea pulchella expressed in Aspergillus nidulans with potential applications in biotechnology. Biotechnology for Biofuels. v. 7, p. 115, 2014. Qualis: A1
48.	ROCHA, C R R ; GARCIA, C C M ; VIEIRA, D B ; QUINET, A ; DE ANDRADE-LIMA, L C ; MUNFORD, V ; BELIZÁRIO, J E ; MENCK, C F M. Glutathione depletion sensitizes cisplatin- and temozolomide-resistant glioma cells in vitro and in vivo. Cell Death & Disease. v. 5, p. e1505, 2014. Qualis: A2
49.	Rodrigues Neto, A. C. ; Machado, B. S. ; Florence, G. ; Hamad, A. P. ; Sakamoto, A. C. ; Fujita, A. ; Baccalá, L. A. ; Amaro Jr, E. ; Sameshima, K.. Brain network dynamics characterization in epileptic seizures. The European Physical Journal. Special Topics. v. 223, p. 2933-2941, 2014. Qualis: Não identificado (SPECIAL TOPICS)
50.	RODRIGUES, ADRIANA C. ; Ortiz, Paola A. ; COSTA-MARTINS, ANDRÉ G. ; NEVES, LUIS ; GARCIA, HERAKLES A. ; ALVES, JOÃO M.P. ; Camargo, Erney P. ; Alfieri, Silvia C. ; GIBSON, WENDY ; TEIXEIRA, MARTA M.G.. Congopain genes diverged to become specific to Savannah, Forest and Kilifi subgroups of Trypanosoma congolense, and are valuable for diagnosis, genotyping and phylogenetic inferences. Infection, Genetics and Evolution (Print). v. 1, p. 1, 2014. Qualis: A2
51.	RODRIGUES, P. T. ; ALVES, J. M. P. ; SANTAMARIA, A. M. ; CALZADA, J. E. ; XAYAVONG, M. ; PARISE, M. ; DA SILVA, A. J. ; FERREIRA, M. U.. Using Mitochondrial Genome Sequences to Track the Origin of Imported Plasmodium vivax Infections Diagnosed in the United States. The American Journal of Tropical Medicine and Hygiene. v. 3, p. 1, 2014. Qualis: A3 (AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGINE)
52.	RODRIGUES, VIVIANE D. ; TORRES, TATIANA T. ; OTTOBONI, LAURA M. M.. Bacterial diversity assessment in soil of an active Brazilian copper mine using high-throughput sequencing of 16S rDNA amplicons. Antonie van Leeuwenhoek (Gedrukt),. p. 879-890, 2014. Qualis: B1 (ANTONIE VAN LEEUWENHOEK)
53.	ROJAS, J. D. ; STARCEVIC, A. ; BARANASI , D. ; FERREIRA-TORRES, M. A. ; CONTRERAS, C. A. ; GARRIDO, L. M. ; ARAUJO, W. L. ; de Souza, R. F. ; ZUCKO, J. ; HRANUELI, D. ; LONG, P. F. ; CULLUM, J. ; PADILLA, G.. Genome Sequence of Streptomyces olindensis DAUFPE 5622, Producer of the Antitumoral Anthracycline Cosmomycin D. Genome Announcements. v. 2, p. e00541-14-e00541-14, 2014. Qualis: B3
54.	ROMANELLI TAVARES, VANESSA L ; GORDON, CHRISTOPHER T ; ZECHI-CEIDE, ROSELI M ; KOKITSU-NAKATA, NANCY MIZUE ; VOISIN, NORINE ; TAN, TIONG Y ; HEGGIE, ANDREW A ; VENDRAMINI-PITTOLI, SIULAN ; PROPST, EVAN J ; PAPSIN, BLAKE C ; TORRES, TATIANA T ; BUERMANS, HENK ; CAPELO, LUCIANE PORTAS ; DEN DUNNEN, JOHAN T ; GUION-ALMEIDA, MARIA L ; LYONNET, STANISLAS ; AMIEL, JEANNE ; PASSOS-BUENO, MARIA RITA. Novel variants in GNAI3 associated with auriculocondylar syndrome strengthen a common dominant negative effect. European Journal of Human Genetics. v. 23, p. 481-485, 2014. Qualis: A3
55.	RUEEDI, RICO ; LEDDA, MIRKO ; NICHOLLS, ANDREW W. ; SALEK, REZA M. ; MARQUES-VIDAL, PEDRO ; MORYA, EDGARD ; Sameshima, Koichi ; MONTOLIU, IVAN ; DA SILVA, LAETICIA ; COLLINO, SEBASTIANO ; MARTIN, FRANÇOIS-PIERRE ; REZZI, SERGE ; STEINBECK, CHRISTOPH ; WATERWORTH, DAWN M. ; WAEBER, GÉRARD ; VOLLENWEIDER, PETER ; BECKMANN, JACQUES S. ; LE COUTRE, JOHANNES ; MOOSER, VINCENT ; BERGMANN, SVEN. Genome-Wide Association Study of Metabolic Traits Reveals Novel Gene-Metabolite-Disease Links. PLOS Genetics (Online). v. 10, p. e1004132, 2014. Qualis: A1
56.	RUIZ-LINARES, A ; ADHIKARI, K. ; ACUNA-ALONZO, V. ; QUINTO-SANCHEZ, M. ; JARAMILLO, C. ; ARIAS, W. ; FUENTES, M. ; PIZARRO, M. ; EVERARDO, P. ; AVILA, F. ; GOMEZ-VALDES, J. ; LEON-MIMILA, P. ; HÜNEMEIER, T. ; RAMALLO, V. ; CERQUEIRA, C. C. S. ; BURLEY, M. ; KONCA, E. ; De OLIVEIRA, M. Z. ; VERONEZ, M. R. ; RUBIO-CODINA, M.. Admixture in Latin America: Geographic Structure, Phenotypic Diversity and Self-Perception of Ancestry Based on 7,342 Individuals. PLOS Genetics (Online). v. 10, p. e1004572, 2014. Qualis: A1
57.	SALLES, IVAN ; BUCKERIDGE, MARCOS. Alometria e arquitetura de árvores. Revista da Biologia. v. 12, p. 17-20, 2014. Qualis: B4
58.	SANTOS, ANDREA PIRES DOS ; CONRADO, FRANCISCO DE OLIVEIRA ; Messick, Joanne Belle ; Biondo, Alexander Welker ; OLIVEIRA, SIMONE TOSTES DE ; GUIMARAES, ANA MARCIA SÁ ; NASCIMENTO, NAÍLA CANNES DO ; PEDRALLI, VIVIANE ; LASTA, CAMILA SERINA ; GONZÁLEZ, FÉLIX HILÁRIO DIAZ. Hemoplasma prevalence and hematological abnormalities associated with infection in three different cat populations from Southern Brazil. Revista Brasileira de Parasitologia Veterinária (Online). v. 23, p. 428-434, 2014. Qualis: A2
59.	Schuch, André P. ; Moraes, Maria Carolina S. ; Yagura, Teiti ; MENCK, CARLOS F. M.. Highly Sensitive Biological Assay for Determining the Photoprotective Efficacy of Sunscreen. Environmental Science & Technology. v. 48, p. 11584-11590, 2014. Qualis: A1
60.	SILVA, ADERBAL R. T. ; SANTOS, ANA CECÍLIA FEIO ; FARFEL, JOSE M. ; GRINBERG, LEA T. ; FERRETTI, RENATA E. L. ; Campos, Antonio Hugo Jose Froes Marques ; CUNHA, ISABELA WERNECK ; BEGNAMI, MARIA DIRLEI ; ROCHA, RAFAEL M. ; Carraro, Dirce M. ; DE BRAGANÇA PEREIRA, CARLOS ALBERTO ; JACOB-FILHO, WILSON ; BRENTANI, HELENA. Repair of Oxidative DNA Damage, Cell-Cycle Regulation and Neuronal Death May Influence the Clinical Manifestation of Alzheimer-s Disease. Plos One. v. 9, p. e99897, 2014. Qualis: A1
61.	SILVA-ROCHA, R. ; Koide, Tie. A biologia sintética e a reprogramação de organismos vivos. Ciência Hoje. v. 53, p. 32, 2014.Qualis: C
62.	STEINMACHER, Igor Fábio ; WIESE, Igor Scaliante ; SCHWERZ, André Luís ; ROBERTO, Rafael Liberato ; FERREIRA, J. E. ; GEROSA, Marco Aurélio. HISTORICAL ANALYSIS OF MESSAGE CONTENTS TO RECOMMEND ISSUES TO OPEN SOURCE SOFTWARE CONTRIBUTORS. REVISTA ELETRÔNICA DE SISTEMAS DE INFORMAÇÃO (RESI). v. 13, p. 6, 2014. Qualis: B3
63.	STOPPE, N. C. ; SILVA, J. S. ; TORRES, T.T. ; CARLOS, C. ; HACHICH, E. M. ; SATO, M. I. Z. ; SARAIVA, A. M. ; OTTOBONI, L. M. M.. Clustering of water bodies in unpolluted and polluted environments based on Escherichia coli phylogroup abundance using a simple interaction database. Genetics and Molecular Biology (Impresso). v. 37, p. 694-701, 2014. Qualis: A4
64.	Takahashi, D. Y. ; Baccalá, L. A. ; Sameshima, K.. Canonical information flow decomposition among neural structure subsets. Frontiers in Neuroinformatics. v. 8, p. 49, 2014. Qualis: Não identificado (FRONTIERS IN NEUROINFORMATICS)
65.	TAMAROZZI, E. R. ; TORRIERI, E. ; SEMIGHINI, E. P. ; GIULIATTI, S. In silico analysis of mutations occurring in the protein N-acetylgalactosamine-6-sulfatase (GALNS) and causing mucopolysaccharidosis IVA. Genetics and Molecular Research. v. 13, p. 10025-10034, 2014. Qualis: B3
66.	TAMIM, SALEH ; VO, DAT T. ; UREN, PHILIP J. ; QIAO, MEI ; BINDEWALD, ECKART ; KASPRZAK, WOJCIECH K. ; SHAPIRO, BRUCE A. ; Nakaya, Helder I. ; BURNS, SUZANNE C. ; ARAUJO, PATRICIA R. ; NAKANO, ICHIRO ; RADEK, AGNES J. ; KUERSTEN, SCOTT ; SMITH, ANDREW D. ; PENALVA, LUIZ O. F.. Genomic Analyses Reveal Broad Impact of miR-137 on Genes Associated with Malignant Transformation and Neuronal Differentiation in Glioblastoma Cells. Plos One. v. 9, p. e85591, 2014. Qualis: A1
67.	THOMAS, ANDREW ; GLEBER-NETTO, FREDERICO ; FERNANDES, GUSTAVO ; AMORIM, MARIA ; BARBOSA, LUISA ; FRANCISCO, ANA ; GUERRA DE ANDRADE, ARTHUR ; Setubal, João ; KOWALSKI, LUIZ ; NUNES, DIANA ; DIAS-NETO, Emmanuel. Alcohol and tobacco consumption affects bacterial richness in oral cavity mucosa biofilms. BMC Microbiology (Online). v. 14, p. 250, 2014. Qualis: A2
68.	TORTO-ALALIBO, TRUDY ; PURWANTINI, ENDANG ; LOMAX, JANE ; SETUBAL, JOãO C. ; MUKHOPADHYAY, BISWARUP ; TYLER, BRETT M.. Genetic resources for advanced biofuel production described with the Gene Ontology. Frontiers in Microbiology (Online). v. 5, p. 5:528, 2014. Qualis: A1
69.	VANKUREN, NICHOLAS W. ; VIBRANOVSKI, MARIA D.. A Novel Dataset for Identifying Sex-Biased Genes in Drosophila. Journal of Genomics. v. 2, p. 64-67, 2014. Qualis: C
70.	Verjovski-Almeida, S.; BURO, C. ; BECKMANN, S. ; OLIVEIRA, K. C. ; DISSOUS, C. ; CAILLIAU, K. ; MARHOFER, R. J. ; SELZER, P. M. ; Verjovski-Almeida, S. ; GREVELDING, C. G.. Imatinib Treatment Causes Substantial Transcriptional Changes in Adult Schistosoma mansoni In Vitro Exhibiting Pleiotropic Effects. PLoS Neglected Tropical Diseases (Online). v. 8, p. e2923, 2014. Qualis: A1
71.	Verjovski-Almeida, S.; SILVEIRA, R. A. ; FACHEL, A. A. ; MOREIRA, Y. B. ; de SOUZA, C. A. ; COSTA, F. F. ; Verjovski-Almeida, S. ; PAGNANO, K. B. B.. Protein-coding genes and long noncoding RNAs are differentially expressed in dasatinib-treated chronic myeloid leukemia patients with resistance to imatinib. Hematology (Luxembourg. Print). v. 19, p. 31-41, 2014. Qualis: Não identificado (PRINT))
72.	VIBRANOVSKI, M. D. Meiotic Sex Chromosome Inactivation in. Journal of Genomics. v. 2, p. 104-117, 2014. Qualis: C
73.	ZARAMELA, LIVIA S. ; VÊNCIO, RICARDO Z. N. ; TEN-CATEN, FELIPE ; BALIGA, NITIN S. ; Koide, Tie. Transcription Start Site Associated RNAs (TSSaRNAs) Are Ubiquitous in All Domains of Life. PLoS One. v. 9, p. e107680, 2014. Qualis: A1

2013

1.	ALMEIDA, FERNANDA N. ; Sabino, Ester C. ; TUNES, GISELA ; Schreiber, George B. ; B. DA SILVA, PEDRO PAULO S. ; CARNEIRO-PROIETTI, ANNA BARBARA F. ; Ferreira, João Eduardo ; Mendrone-Junior, Alfredo. Predictors of low haematocrit among repeat donors in São Paulo, Brazil: eleven year longitudinal analysis. Transfusion and Apheresis Science. v. 49, p. 553-559, 2013. Qualis: B1
2.	ALVES, J. M. P.; KLEIN, C. C. ; da Silva, Flávia Maia ; COSTA-MARTINS, A. G. ; Serrano, Myrna G. ; Buck, Gregory A ; VASCONCELOS, A. T. R. ; SAGOT, M.-F. ; MOTTA, M. C. M. ; Camargo, Erney P.. Endosymbiosis in trypanosomatids: the genomic cooperation between bacterium and host in the synthesis of essential amino acids is heavily influenced by multiple horizontal gene transfers. BMC Evolutionary Biology (Online). v. 13, p. 190, 2013. Qualis: A1
3.	Alves, João MP; Serrano, Myrna G. ; da Silva, Flávia Maia ; Voegtly, Logan ; Matveyev, Andrey V. ; Teixeira, Marta M. G. ; Camargo, Erney P. ; Buck, Gregory A. Genome Evolution and Phylogenomic Analysis of Candidatus Kinetoplastibacterium, the Betaproteobacterial Endosymbionts of Strigomonas and Angomonas. Genome Biology and Evolution. v. 5, p. 338-350, 2013. Qualis: A1
4.	Amorim, CEG ; Bisso-Machado, R ; RAMALLO, V. ; BORTOLINI, M. C. ; BONATTO, S. L. ; SALZANO, F. M. ; HÜNEMEIER, T.. A Bayesian Approach to Genome/Linguistic Relationships in Native South Americans. Plos One. v. 8, p. e64099, 2013. Qualis: A1
5.	Aurelien Mazurie ; ALVES, J. ; OZAKI, L. S. ; ZHOU, S. ; SCHWARTZ, D. ; BUCK, G. A.. Comparative Genomics of Cryptosporidium. Comparative and Functional Genomics. v. 2013, p. 1-8, 2013. Qualis: Não identificado (COMPARATIVE AND FUNCTIONAL GENOMICS)
6.	BACCALA, L. A. ; DE BRITO, C. S. N. ; Takahashi, D. Y. ; Sameshima, K.. Unified asymptotic theory for all partial directed coherence forms. Philosophical Transactions - Royal Society. Mathematical, Physical and Engineering Sciences (Print). v. 371, p. 20120158-20120158, 2013. Qualis: Não identificado (MATHEMATICAL, PHYSICAL AND ENGINEERING SCIENCES)
7.	BATTIE-LACLAU, PATRICIA ; LACLAU, JEAN-PAUL ; PICCOLO, MARISA DE CASSIA ; ARENQUE, BRUNA CERSÓZIMO ; BERI, CONSTANCE ; MIETTON, LAURIANE ; MUNIZ, MARTA R. ALMEIDA ; JORDAN-MEILLE, LIONEL ; BUCKERIDGE, MARCOS SILVEIRA ; NOUVELLON, YANN ; RANGER, JACQUES ; BOUILLET, JEAN-PIERRE. Influence of potassium and sodium nutrition on leaf area components in Eucalyptus grandis trees. Plant and Soil (Print). v. 371, p. 19-35, 2013. Qualis: A1
8.	BECKEDORFF, F. C. F. ; OLIVEIRA, Ana Carolina Ayupe de ; CROCCI-SOUZA, R. ; AMARAL, M. S. ; Nakaya, Helder I ; SOLTYS, D. T. ; MENCK, Carlos F M ; Reis, Eduardo M ; REIS, EM ; VERJOVSKI-ALMEIDA, Sergio. The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, decreasing RASSF1A isoform expression and Increasing cell proliferation. PLOS Genetics. v. 9, p. e1003705, 2013. Qualis: A1
9.	BECKEDORFF, FELIPE ; AMARAL, MURILO ; DEOCESANO-PEREIRA, CARLOS ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Long noncoding RNAs and their implications in cancer epigenetics. Bioscience Reports. v. 33, p. e00061, 2013. Qualis: A3
10.	Bisso-Machado, R ; RAMALLO, V. ; TARAZONA-SANTOS, E. ; SALZANO, F. M. ; BORTOLINI, M. C. ; HÜNEMEIER, T.. 5-HTTLPR genetic diversity and mode of subsistence in Native Americans. American Journal of Physical Anthropology. v. 00, p. 000-000, 2013. Qualis: A2
11.	BRASIL, CHRISTIANE REGINA SOARES ; DELBEM, ALEXANDRE CLAUDIO BOTAZZO ; da Silva, Fernando Luís Barroso. Multiobjective evolutionary algorithm with many tables for purely ab initio protein structure prediction. Journal of Computational Chemistry. v. 34, p. n/a-n/a, 2013. Qualis: A1
12.	Brentani, H; PAULA, C. S. ; BORDINI, D. ; ROLIM, D. ; SATO, F. ; PORTOLESE, J. ; PACIFICO, M. C. ; MCCRACKEN, J. T.. Autism spectrum disorders: an overview on diagnosis and treatment. Revista Brasileira de Psiquiatria (São Paulo. 1999. Impresso). v. 35, p. S62-S72, 2013. Qualis: Não identificado (IMPRESSO))
13.	BROWN, NEIL A. ; DE CASTRO, PATRÍCIA A. ; DE CASTRO PIMENTEL FIGUEIREDO, BÁRBARA ; SAVOLDI, MARCELA ; BUCKERIDGE, M. S. ; LOPES, M. L. ; LOPES, MÁRIO L. ; DE LIMA PAULLILO, SILENE C. ; BORGES, EDUARDO P. ; Amorim, Henrique V. ; GOLDMAN, MARIA H.S. ; BONATTO, DIEGO ; MALAVAZI, IRAN ; GOLDMAN, GUSTAVO H.. Transcriptional profiling of Brazilian Saccharomyces cerevisiae strains selected for semi-continuous fermentation of sugarcane must. FEMS Yeast Research. v. 13, p. 277-290, 2013. Qualis: A3
14.	Buro, C ; Oliveira, K.C. ; Lu, Z ; Leutner, S ; Beckmann, S ; Dissous, C ; Cailliau, K ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Grevelding, C. Transcriptome Analyses of Inhibitor-treated Schistosome Females Provide Evidence for Cooperating Src-kinase and TGFβ Receptor Pathways Controlling Mitosis and Eggshell Formation.. PLoS Pathogens. v. 9, p. e1003448, 2013. Qualis: A1
15.	CAMPOS, L. T. ; Brentani, H ; ROELA, R. A. ; KATAYAMA, M. L. H. ; LIMA, L. A. ; ROLIM, C. F. ; MILANI, C. ; FOLGUEIRA, M. A. A. K. ; BRENTANI, M. M.. Differences in transcriptional effects of 1α,25 dihydroxyvitamin D3 on fibroblasts associated to breast carcinomas and from paired normal breast tissues. Journal of Steroid Biochemistry and Molecular Biology. v. 133, p. 12-24, 2013. Qualis: A2
16.	CARLOS, C. ; TORRES, T.T. ; OTTOBONI, LMM. Bacterial communities and species-specific associations with the mucus of Brazilian coral species. SCI REP-UK. v. 3, p. 1624, 2013. Qualis: Não identificado (SCI REP-UK)
17.	Carraro, Dirce Maria ; KOIKE FOLGUEIRA, MARIA APARECIDA AZEVEDO ; GARCIA LISBOA, BIANCA CRISTINA ; RIBEIRO OLIVIERI, ELOISA HELENA ; VITORINO KREPISCHI, ANA CRISTINA ; DE CARVALHO, ALEX FIORINI ; DE CARVALHO MOTA, LOUISE DANIELLE ; Puga, Renato David ; DO SOCORRO MACIEL, MARIA ; MICHELLI, RODRIGO AUGUSTO DEPIERI ; DE LYRA, EDUARDO CARNEIRO ; GROSSO, STANA HELENA GIORGI ; Soares, Fernando Augusto ; DE SOUZA WADDINGTON ACHATZ, MARIA ISABEL ALVES ; BRENTANI, HELENA ; Moreira-Filho, Carlos Alberto ; Brentani, Maria Mitzi. Comprehensive Analysis of BRCA1, BRCA2 and TP53 Germline Mutation and Tumor Characterization: A Portrait of Early-Onset Breast Cancer in Brazil. Plos One. v. 8, p. e57581, 2013. Qualis: A1
18.	CHILE, THAIS ; FORTES, MARIA ANGELA ; CORRÊA-GIANNELLA, MARIA LÚCIA ; Brentani, Helena Paula ; AUGUSTO, DURVANEI MARIA ; Puga, Renato David ; DE PAULA, VANESSA DE ; KUBRUSLY, MARCIA SALDANHA ; NOVAK, ESTELA MARIA ; BACCHELLA, TELÉSFORO ; GIORGI, RICARDO RODRIGUES. HOXB7 mRNA is overexpressed in pancreatic ductal adenocarcinomas and its knockdown induces cell cycle arrest and apoptosis. BMC Cancer (Online). v. 13, p. 451, 2013. Qualis: A2
19.	COFIEL, LUCIANA ; BASSI, DÉBORA U. ; RAY, RYAN KUMAR ; PIETROBON, RICARDO ; BRENTANI, HELENA. Detecting Dissonance in Clinical and Research Workflow for Translational Psychiatric Registries. Plos One. v. 8, p. e75167, 2013. Qualis: A1
20.	CORTAT, BARBARA ; GARCIA, CAMILA CARRIÃO MACHADO ; QUINET, ANNABEL ; SCHUCH, A.P. ; de Lima-Bessa, Keronninn Moreno ; MENCK CF. The relative roles of DNA damage induced by UVA irradiation in human cells. Photochemical & Photobiological Sciences. v. 12, p. 1483-1495, 2013. Qualis: A3
21.	da Silva, Fernando Luis Barroso. Peculiaridades nos Mecanismos Moleculares de Proteínas em Solução Aquosa: exemplo da importância do equilíbrio ácido-base para aplicações em Biotecnologia. Quimica. . v. 131, p. 43-48, 2013.Qualis: Não identificado ()
22.	DARRASSE, ARMELLE ; CARRÈRE, SÉBASTIEN ; BARBE, VALÉRIE ; BOUREAU, TRISTAN ; ARRIETA-ORTIZ, MARIO L ; BONNEAU, SOPHIE ; BRIAND, MARTIAL ; BRIN, CHRYSTELLE ; COCIANCICH, STÉPHANE ; DURAND, KARINE ; FOUTEAU, STÉPHANIE ; GAGNEVIN, LIONEL ; GUÉRIN, FABIEN ; GUY, ENDRICK ; INDIANA, ARNAUD ; Koebnik, Ralf ; LAUBER, EMMANUELLE ; MUNOZ, ALEJANDRA ; NOËL, LAURENT D ; SLUYS MAV.. Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads. BMC Genomics. v. 14, p. 761, 2013. Qualis: A2
23.	De Almeida-Neto, Cesar ; Sabino, Ester Cerdeira ; Liu, Jing ; Blatyta, Paula Fraiman ; Mendrone-Junior, Alfredo ; Salles, Nanci Alves ; Leão, Silvana Carneiro ; Wright, David J. ; Basques, Fernando Valadares ; Ferreira, João Eduardo ; Busch, Michael P. ; Murphy, Edward L. ; NHLBI RETROVIRUS EPIDEMIOLOGY DONOR STUDY-II (REDS-II), INTERNATIONAL COMPONENT. Prevalence of serologic markers for hepatitis B and C viruses in Brazilian blood donors and incidence and residual risk of transfusion transmission of hepatitis C virus. Transfusion (Arlington, Va.). v. 53, p. 827-834, 2013. Qualis: A3
24.	de FARIAS, C. R. G.; Trepode, N. W. ; Barrera, J.. A pattern-oriented specification of gene network inference processes. Computers in Biology and Medicine. v. 43, p. 1415-1427, 2013. Qualis: A2
25.	DE GODOY, F. ; BERMUDEZ, L. ; LIRA, B. S. ; DE SOUZA, A. P. ; ELBL, P. ; DEMARCO, D. ; ALSEEKH, S. ; INSANI, M. ; BUCKERIDGE, M. S. ; ALMEIDA, J. ; GRIGIONI, G. ; FERNIE, A. R. ; CARRARI, F. ; ROSSI, M.. Galacturonosyltransferase 4 silencing alters pectin composition and carbon partitioning in tomato. Journal of Experimental Botany (Online). v. 64, p. 2449-2466, 2013. Qualis: A1
26.	DE SIQUEIRA FERREIRA, SAVIO ; NISHIYAMA, MILTON ; PATERSON, ANDREW H ; SOUZA, GLAUCIA. Biofuel and energy crops: high-yield Saccharinae take center stage in the post-genomics era. GenomeBiology.com (London. Print). v. 14, p. 210, 2013. Qualis: Não identificado (PRINT))
27.	DE SIQUEIRA SANTOS, S. ; TAKAHASHI, D. Y. ; NAKATA, A. ; FUJITA, A.. A comparative study of statistical methods used to identify dependencies between gene expression signals. Briefings in Bioinformatics. v. 15, p. 906-918, 2013. Qualis: A1
28.	DE SOUZA, ALESSANDRA A. ; IONESCU, MICHAEL ; BACCARI, CLELIA ; da Silva, Aline M. ; LINDOW, STEVEN E.. Phenotype Overlap in Xylella fastidiosa Is Controlled by the Cyclic Di-GMP Phosphodiesterase Eal in Response to Antibiotic Exposure and Diffusible Signal Factor-Mediated Cell-Cell Signaling. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. v. 79, p. 3444-3454, 2013. Qualis: A1
29.	DE SOUZA, AMANDA P. ; De Souza, Amanda Pereira ; ARUNDALE, REBECCA A. ; DOHLEMAN, FRANK G. ; LONG, STEPHEN P. ; BUCKERIDGE, M. S.. Will the exceptional productivity of Miscanthus x giganteus increase further under rising atmospheric CO2?. Agricultural and Forest Meteorology (Print). v. 171-172, p. 82-92, 2013. Qualis: A2 (AGRICULTURAL AND FOREST ENTOMOLOGY)
30.	De Souza, Amanda Pereira ; Souza, Amanda P. ; LEITE, DÉBORA C. C. ; PATTATHIL, SIVAKUMAR ; BUCKERIDGE, M. S. ; HAHN, MICHAEL G.. Composition and Structure of Sugarcane Cell Wall Polysaccharides: Implications for Second-Generation Bioethanol Production. BioEnergy Research. v. 6, p. 564-579, 2013. Qualis: A1
31.	do Nascimento, N. C. ; DOS SANTOS, A. P. ; CHU, Y. ; GUIMARAES, A. M. S. ; PAGLIARO, A. ; MESSICK, J. B.. Genome Sequence of Mycoplasma parvum (Formerly Eperythrozoon parvum), a Diminutive Hemoplasma of the Pig. Genome Announcements. v. 1, p. e00986-13-e00986-13, 2013. Qualis: B3
32.	EVANS, EVANSJAY D. ; BROWN, SUSAN J. ; HACKETT, KEVIN J. ; ROBINSON, GENE ; RICHARDS, STEPHEN ; LAWSON, DANIEL ; ELSIK, CHRISTINE ; CODDINGTON, JONATHA ; EDWARDS, OWAIN ; EMRICH, SCOTT ; GABALDON, TONI ; GOLDSMITH, MARIAN ; HANES, GLENN ; MISOF, BERNARD ; MUÑOZ-TORRES, MONICA ; NIEHUIS, OLIVER ; PAPANICOLAOU, ALEXIE ; PFRENDER, MICHAEL ; POELCHAU, MONICA ; TORRES, T.T.. The i5K Initiative: Advancing Arthropod Genomics for Knowledge, Human Health, Agriculture, and the Environment. Journal of Heredity. v. 104, p. 595-600, 2013. Qualis: A3
33.	Fernandes-Lima, Z. S. ; Paixão-Côrtes, Vanessa R ; Andrade, A. K. M. ; Fernandes, A. S. ; Coronado, B. N. L. ; Monte Filho, H. P. ; Santos, M. J. ; Omena Filho, R. L. ; Biondi, F. C. ; Ruiz-Linares, Andrés ; RAMALLO, V. ; HÜNEMEIER, T. ; SCHULER-FACCINI, L. ; MONLLEO, I. L.. Ocular And Craniofacial Phenotypes In A Large Brazilian Family With Congenital Aniridia. Clinical Genetics,. p. n/a-n/a, 2013. Qualis: A3 (CLINICAL GENETICS)
34.	FIORI, G. M. L. ; FACHIN, A. L. ; CORREA, V. S. C. ; BERTONI, B. W. ; Giuliatti, S ; AMUI, S. F. ; FRANÇA, S. C. ; PEREIRA, A. M. S.. Antimicrobial Activity and Rates of Tannins in Stryphnodendron adstringens Mart. Accessions Collected in the Brazilian Cerrado. American Journal of Plant Sciences. v. 04, p. 2193-2198, 2013. Qualis: C
35.	Fujita, André; TAKAHASHI, DANIEL Y. ; PATRIOTA, ALEXANDRE G.. A non-parametric method to estimate the number of clusters. Computational Statistics & Data Analysis (Print). v. 73, p. 27-39, 2013. Qualis: A2
36.	GALLETII, M. F. B. M. ; Fujita, Andre ; NISHIYAMA-JR., M. Y. ; MALOSSI, C. D. ; PINTER, A. ; SOARES, J. F. ; DAFFRE, S. ; LABRUNA, M. B. ; FOGACA, A. C.. Natural Blood Feeding and Temperature Shift Modulate the Global Transcriptional Profile of Rickettsia rickettsii Infecting Its Tick Vector. Plos One. v. 8, p. e77388, 2013. Qualis: A1
37.	GARCIA, ANTONIO A. F. ; Mollinari, Marcelo ; Marconi, Thiago G. ; SERANG, OLIVER R. ; SILVA, RENATO R. ; VIEIRA, MARIA L. C. ; Vicentini, Renato ; COSTA, ESTELA A. ; MANCINI, MELINA C. ; GARCIA, MELISSA O. S. ; PASTINA, MARIA M. ; Gazaffi, Rodrigo ; MARTINS, ELIANA R. F. ; DAHMER, NAIR ; SFORÇA, DANILO A. ; SILVA, CLAUDIO B. C. ; BUNDOCK, PETER ; HENRY, ROBERT J. ; Souza, Glaucia M. ; Van Sluys, Marie-Anne. SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids. Scientific Reports. v. 3, p. 3399, 2013. Qualis: A2
38.	GENTILE, AGUSTINA ; FERREIRA, THAÍS H. ; MATTOS, RAPHAEL S. ; DIAS, LARA I. ; Hoshino, Andrea A. ; CARNEIRO, MONALISA S. ; Souza, Glaucia M. ; CALSA, TERCÍLIO ; NOGUEIRA, REJANE M. ; ENDRES, LAURÍCIO ; Menossi, Marcelo. Effects of drought on the microtranscriptome of field-grown sugarcane plants. Planta (Heidelberg. v. 3, p. 783-798, 2013. Qualis: A1
39.	GOMEZ-VALDES, J. ; HÜNEMEIER, T. ; QUINTO-SANCHEZ, M. ; PASCHETTA, C. ; AZEVEDO, S. ; GONZALEZ, M. F. ; MARTINEZ-ABADIAS, N. ; Esparza, M ; PUCCARELLI, H. M. ; SALZANO, F. M. ; Bau, CD ; BORTOLINI, M. C. ; GONZALEZ-JOSE, R.. Lack of Support for the Association between Facial Shape and Aggression: A Reappraisal Based on a Worldwide Population Genetics Perspective. Plos One. v. 8, p. e52317, 2013. Qualis: A1
40.	GONZALEZ-KRISTELLER, D.C. ; GUTIYAMA, L.M. ; CAMPOS, A.H. ; SOARES, F.A. ; BRENTANI, H. ; MALNIC, B.. Odorant receptor genes are expressed in olfactory neuroblastoma. Genetics and Molecular Research. v. 12, p. 3479-3487, 2013. Qualis: B3
41.	Gonçalez, Thelma T. ; Sabino, Ester C. ; SCHLUMPF, KAREN S. ; Wright, David J. ; MENDRONE, ALFREDO ; LOPES, MARIA ; LEÃO, SILVANA ; MIRANDA, CAROLINA ; Capuani, Ligia ; CARNEIRO-PROIETTI, ANNA BARBARA F. ; BASQUES, FERNANDO ; Ferreira, João E. ; Busch, Michael ; Custer, Brian ; NHLBI RETROVIRUS EPIDEMIOLOGY DONOR STUDY-II (REDS-II), INTERNATIONAL COMPONENT. Analysis of donor deferral at three blood centers in Brazil. Transfusion (Arlington, Va.). v. 53, p. 531-538, 2013. Qualis: A3
42.	Gracioso, Louise Hase ; Avanzi, Ingrid Regina ; Baltazar, Marcela Passos Galluzzi ; Martins-Pinheiro M ; Karolski B ; MENCK CF ; NASCIMENTO, C. A. O. ; PERPETUO, E. A.. Proteome analysis of a phenol-degrading Achromobacter sp. C-1 isolated from an industrial area. Current Proteomics. v. 9, p. 280-289, 2013.Qualis: B4
43.	GRAS, DIANA E. ; PERSINOTI, GABRIELA F. ; PERES, NALU T.A. ; MARTINEZ-ROSSI, NILCE M. ; TAHIRA, ANA C. ; Reis, Eduardo M. ; REIS, EM ; PRADE, ROLF A. ; ROSSI, ANTONIO. Transcriptional profiling of Neurospora crassa -mak-2 reveals that mitogen-activated protein kinase MAK-2 participates in the phosphate signaling pathway. Fungal Genetics and Biology (Print). v. 60, p. 140-149, 2013. Qualis: A2
44.	GROSSO, STANA HELENA GIORGI ; Katayama, Maria Lucia Hirata ; ROELA, ROSIMEIRE APARECIDA ; Nonogaki, Suely ; Soares, Fernando Augusto ; BRENTANI, HELENA ; Lima, Leandro ; Folgueira, Maria Aparecida Azevedo Koike ; WAITZBERG, ANGELA FLÁVIA LOGULLO ; PASINI, FÁTIMA SOLANGE ; GÓES, JOÃO CARLOS GUEDES SAMPAIO ; BRENTANI, M. MITZI. Breast cancer tissue slices as a model for evaluation of response to rapamycin. Cell & Tissue Research (Internet). v. 352, p. 671-684, 2013. Qualis: A2
45.	HALCSIK, E. ; FORNI, M. F. ; FUJITA, A. ; VERANO-BRAGA, T. ; JENSEN, O. N. ; SOGAYAR, M. C.. New insights in osteogenic differentiation revealed by mass spectrometric assessment of phosphorylated substrates in murine skin mesenchymal cells. BMC Cell Biology (Online). v. 14, p. 47, 2013. Qualis: B1
46.	HIGA, C. H. A. ; ANDRADE, T. P. ; HASHIMOTO, R. F.. Growing Seed Genes from Time Series Data and Thresholded Boolean Networks with Perturbation. IEEE/ACM Transactions on Computational Biology and Bioinformatics (Print). v. 10, p. 37-49, 2013. Qualis: A1
47.	Hotta, Carlos Takeshi ; Nishiyama, Milton Yutaka ; SOUZA, GLAUCIA MENDES. Circadian Rhythms of Sense and Antisense Transcription in Sugarcane, a Highly Polyploid Crop. Plos One. v. 8, p. e71847, 2013. Qualis: A1
48.	HÜNEMEIER, T.; GOMEZ-VALDES, J. ; AZEVEDO, S. ; QUINTO-SANCHEZ, M. ; PASSAGLIA, L. ; SALZANO, F. M. ; SANCHEZ-MEJORADA, G. ; MARTINEZ-ABADIAS, N. ; BORTOLINI, M. C. ; GONZALEZ-JOSE, R.. FGFR1 signaling is associated with the magnitude of morphological integration in human head shape. American Journal of Human Biology. v. 00, p. 000-000, 2013. Qualis: A1
49.	IONESCU, M. ; BACCARI, C. ; DASILVA, A.M. ; Garcia A ; YOKOTA, K. ; Lindow, S.E.. Diffusible Signal Factor (DSF) Synthase RpfF of Xylella fastidiosa Is a Multifunction Protein Also Required for Response to DSF. JOURNAL OF BACTERIOLOGY. v. 195, p. 5273-5284, 2013. Qualis: A3
50.	JALAN, NEHA ; KUMAR, DIBYENDU ; ANDRADE, MAXUEL O ; YU, FAHONG ; Jones, Jeffrey B ; GRAHAM, JAMES H ; White, Frank F ; Setubal, João C ; WANG, NIAN. Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range. BMC Genomics. v. 14, p. 551, 2013. Qualis: A2
51.	JORDAO, F. M. ; GABRIEL, H. B. ; Alves, João MP ; ANGELI, C. B. ; BIFANO, T. D. ; Breda, A. ; AZEVEDO, M. F. ; BASSO, L. A. ; Wunderlich, G. ; KIMURA, E. A. ; KATZIN, A. M.. Cloning and characterization of bifunctional enzyme farnesyl diphosphate/geranylgeranyl diphosphate synthase from Plasmodium falciparum. Malaria Journal (Online). v. 12, p. 184, 2013. Qualis: A1
52.	KASHIWABARA, ANDRÉ YOSHIAKI ; BONADIO, ÍGOR ; ONUCHIC, VITOR ; AMADO, FELIPE ; MATHIAS, RAFAEL ; Durham, Alan Mitchell. ToPS: A Framework to Manipulate Probabilistic Models of Sequence Data. PLOS Computational Biology (Online). v. 9, p. e1003234, 2013. Qualis: A1
53.	KLEIN, C. C. ; ALVES, J. M. P. ; SERRANO, M. G. ; BUCK, G. A. ; VASCONCELOS, A. T. R. ; SAGOT, M.-F. ; Teixeira, M. M. G. ; Camargo, Erney P. ; MOTTA, M. C. M.. Biosynthesis of Vitamins and Cofactors in Bacterium-Harbouring Trypanosomatids Depends on the Symbiotic Association as Revealed by Genomic Analyses. Plos One. v. 8, p. e79786, 2013. Qualis: A1
54.	KOBAYASHI, GERSON SHIGERU ; ALVIZI, LUCAS ; SUNAGA, DANIELE YUMI ; FRANCIS-WEST, PHILIPPA ; KUTA, ANNA ; ALMADA, BRUNO VINÍCIUS PIMENTA ; FERREIRA, SIMONE GOMES ; DE ANDRADE-LIMA, LEONARDO CARMO ; BUENO, DANIELA FRANCO ; RAPOSO-AMARAL, CÁSSIO EDUARDO ; Menck, Carlos Frederico ; PASSOS-BUENO, MARIA RITA. Susceptibility to DNA Damage as a Molecular Mechanism for Non-Syndromic Cleft Lip and Palate. Plos One. v. 8, p. e65677, 2013. Qualis: A1
55.	LAZARINI, MARIANA ; Traina, Fabiola ; MACHADO-NETO, JOÃO A. ; BARCELLOS, KARIN S.A. ; Moreira, Yuri B. ; BRANDÃO, MARCELO M. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; RIDLEY, ANNE J. ; SAAD, SARA T. OLALLA. ARHGAP21 is a RhoGAP for RhoA and RhoC with a role in proliferation and migration of prostate adenocarcinoma cells. Biochimica et Biophysica Acta. Molecular Basis of Disease. v. 1832, p. 365-374, 2013. Qualis: Não identificado (MOLECULAR BASIS OF DISEASE)
56.	Ledda, M. ; Kutalik, Z. ; SOUZA DESTITO, M. C. ; Souza, M. M. ; Cirillo, C. A. ; ZAMBONI, A. ; Martin, N. ; Morya, E. ; Sameshima, K. ; BECKMANN, J. S. ; Le Coutre, J. ; Bergmann, S. ; Genick, U. K.. GWAS of Human Bitter Taste Perception Identifies New Loci and Reveals Additional Complexity of Bitter Taste Genetics. Human Molecular Genetics (Print). v. 22, p. ddt404, 2013. Qualis: A1
57.	Lembke, Carolina G. ; Nishiyama, Milton Y ; FERREIRA, SAVIO SIQUEIRA ; Dal-Bianco, Maximiller ; Sato, Paloma M. ; Hotta, Carlos T. ; CARNEIRO, M. S. ; LOUREIRO, M. E. ; CARRER, H. ; ENDRES, L. ; Hoffmann, Hermann Paulo ; SANCHES, M. ; Menossi, Marcelo ; SOUZA, G. M.. Sugarcane genome sequencing and gene discovery: getting closer to sugar content, fibre and drought traits.. International Sugar Journal. v. 115 (1378), p. 708-713, 2013.Qualis: Não identificado (INTERNATIONAL SUGAR JOURNAL)
58.	LEUTNER, SILKE ; Oliveira, Katia C. ; ROTTER, BJÖRN ; BECKMANN, SVENJA ; BURO, CHRISTIN ; HAHNEL, STEFFEN ; KITAJIMA, JOAO P. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; WINTER, PETER ; GREVELDING, CHRISTOPH G.. Combinatory Microarray and SuperSAGE Analyses Identify Pairing-Dependently Transcribed Genes in Schistosoma mansoni Males, Including Follistatin. PLoS Neglected Tropical Diseases (Online). v. 7, p. e2532, 2013. Qualis: A1
59.	Li, Shuzhao ; Nakaya, Helder I. ; KAZMIN, DMITRI A. ; OH, JASON Z. ; Pulendran, Bali. Systems biological approaches to measure and understand vaccine immunity in humans. Seminars in Immunology. v. press, p. press, 2013. Qualis: A1
60.	Li, Shuzhao ; Rouphael, Nadine ; DURAISINGHAM, SAI ; ROMERO-STEINER, SANDRA ; PRESNELL, SCOTT ; DAVIS, CARL ; SCHMIDT, DANIEL S ; JOHNSON, SCOTT E ; MILTON, ANDREA ; RAJAM, GOWRISANKAR ; KASTURI, SUDHIR ; CARLONE, GEORGE M ; QUINN, CHARLIE ; CHAUSSABEL, DAMIEN ; PALUCKA, A KAROLINA ; MULLIGAN, MARK J ; Ahmed, Rafi ; STEPHENS, DAVID S ; Nakaya, Helder I ; Pulendran, Bali. Molecular signatures of antibody responses derived from a systems biology study of five human vaccines. Nature Immunology (Print). v. x, p. 1, 2013. Qualis: A1
61.	LIMA, V. C. C. ; CARVALHO, A. F. ; MORATO-MARQUES, M. ; HASHIMOTO, V. L. ; SPILBORGHS, G. M. G. T. ; MARQUES, S. M. ; LANDMAN, G. ; Torres, Cesar ; RIBEIRO, K. B. ; Brentani, H ; REIS, L. F. L. ; DIAS, A. A. M.. TNF-alpha and melphalan modulate a specific group of early expressed genes in a murine melanoma model. Cytokine. v. 62, p. 217-225, 2013.Qualis: A2
62.	LOCOSSELLI, GIULIANO MASELLI ; BUCKERIDGE, M. S. ; Moreira, Marcelo Zacharias ; CECCANTINI, G. C. T.. A multi-proxy dendroecological analysis of two tropical species (Hymenaea spp., Leguminosae) growing in a vegetation mosaic. Trees (Berlin. Print). v. 27, p. 25-36, 2013. Qualis: Não identificado (PRINT))
63.	LONG, MANYUAN ; VANKUREN, NICHOLAS W. ; CHEN, SIDI ; VIBRANOVSKI, MARIA D.. New Gene Evolution: Little Did We Know. Annual Review of Genetics (Print). v. 47, p. 307-333, 2013. Qualis: Não identificado (ANNUAL REVIEW OF GENETICS)
64.	MARIA BERRA, CAROLINA ; DE OLIVEIRA, CARLA SANTOS ; MACHADO GARCIA, CAMILA CARRIÃO ; REILY ROCHA, CLARISSA RIBEIRO ; KOCH LERNER, LETÍCIA ; DE ANDRADE LIMA, LEONARDO CARMO ; DA SILVA BAPTISTA, MAURÍCIO ; Martins Menck, Carlos Frederico. Nucleotide excision repair activity on DNA damage induced by photoactivated methylene blue. Free Radical Biology & Medicine. v. 61, p. 343-356, 2013. Qualis: A1
65.	MARTINS, D. C. ; OLIVEIRA, E. A. ; BRAGA-NETO, U. ; HASHIMOTO, R. F. ; CESAR JUNIOR, R. M.. Signal Propagation in Bayesian Networks and its Relationship with Intrinsically Multivariate Predictive Variables. Information Sciences. v. 225, p. 18-34, 2013. Qualis: A1
66.	MEDEIROS, DAVID BARBOSA ; SILVA, ELIZAMAR CIRÍACO DA ; NOGUEIRA, REJANE JUREMA MANSUR CUSTÓDIO ; TEIXEIRA, MARCELO MENOSSI ; BUCKERIDGE, MARCOS SILVEIRA. Physiological limitations in two sugarcane varieties under water suppression and after recovering. Theoretical and Experimental Plant Physiology. v. 25, p. 213-222, 2013. Qualis: A4
67.	MIYAZAKI, F. A. ; GUARDIA, G. D. A. ; VÊNCIO, R.Z.N. ; de FARIAS, C. R. G.. Semantic Integration of Gene Expression Analysis Tools and Data Sources using Software Connectors. BMC GENOMICS. v. 14, p. S2, 2013. Qualis: A2
68.	MONTEIRO-VITORELLO, C.B. ; MONTEIRO-VITORELLO, C. B. ; ZERILLO, M. M. ; ZERILLO, M.M. ; VAN SLUYS, M.A. ; VAN SLUYS, M.-A. ; CAMARGO, L. E. A. ; CAMARGO, L.E.A. ; KITAJIMA, J.P. ; KITAJIMA, J. P.. Complete Genome Sequence of Leifsonia xyli subsp. cynodontis Strain DSM46306, a Gram-Positive Bacterial Pathogen of Grasses. Genome Announcements. v. 1, p. e00915-13-e00915-13, 2013. Qualis: B3
69.	NETO, RENATA L. ; MARQUES, LUCAS. M. ; GUIMARÃES, ANA MÁRCIA S. ; YAMAGUTI, MAURICIO ; OLIVEIRA, ROSANGELA C. ; GAETTI-JARDIM JR, ELERSON ; MEDINA, AZIZ O. ; SANFILIPPO, LUIS F. ; Timenetsky, Jorge. Frequency of Different Human Mollicutes Species in the Mucosa of the Oropharynx, Conjunctiva, and Genitalia of Free-Ranging and Captive Capuchin Monkeys ( spp.). American Journal of Primatology (Print). v. 76, p. n/a-n/a, 2013. Qualis: A1
70.	NICOLAU-JUNIOR, NILSON ; Giuliatti, Silvana. Modeling and molecular dynamics of the intrinsically disordered e7 proteins from high- and low-risk types of human papillomavirus. Journal of Molecular Modeling (Print). v. 19, p. 4025-4037, 2013. Qualis: A4
71.	NORRIS, BRIAN A. ; UEBELHOER, LUKE S. ; NAKAYA, HELDER I. ; PRICE, ARYN A. ; GRAKOUI, ARASH ; Pulendran, Bali. Chronic but Not Acute Virus Infection Induces Sustained Expansion of Myeloid Suppressor Cell Numbers that Inhibit Viral-Specific T Cell Immunity. Immunity (Cambridge, Mass.). v. 38, p. 309-321, 2013. Qualis: A1
72.	ORTOLAN, TATIANA GROHMANN ; MENCK, CARLOS FREDERICO M.. UVB-Induced Cell Death Signaling Is Associated with G1-S Progression and Transcription Inhibition in Primary Human Fibroblasts. Plos One. v. 8, p. e76936, 2013. Qualis: A1
73.	PAIXAO-CORTES, V. R. ; VISCARDI, L. ; SALZANO, F. M. ; BORTOLINI, M. C. ; HÜNEMEIER, T.. The cognitive ability of extinct hominins: Bringing down the hierarchy using genomic evidences. American Journal of Human Biology,. p. n/a-n/a, 2013. Qualis: A1 (AMERICAN JOURNAL OF HUMAN BIOLOGY)
74.	PEDRO, RICARDO WANDRÉ DIAS ; NUNES, FÁTIMA L. S. ; Machado-Lima, Ariane. Using grammars for pattern recognition in images. ACM Computing Surveys. v. 46, p. 1-34, 2013. Qualis: A1
75.	Pulendran, Bali ; OH, JASON Z. ; Nakaya, Helder I. ; Ravindran, Rajesh ; KAZMIN, DMITRI A.. Immunity to viruses: learning from successful human vaccines. Immunological Reviews. v. 255, p. 243-255, 2013. Qualis: C (LIMNOLOGICAL REVIEW)
76.	QUINET, ANNABEL ; VESSONI, ALEXANDRE T. ; ROCHA, CLARISSA R.R. ; GOTTIFREDI, VANESA ; BIARD, DENIS ; Sarasin, Alain ; Menck, Carlos F.M. ; Stary, Anne. Gap-filling and bypass at the replication fork are both active mechanisms for tolerance of low-dose ultraviolet-induced DNA damage in the human genome. DNA Repair (Print). v. 14, p. 27-38, 2013. Qualis: A1
77.	RAJASEKARAN, PARTHIBAN ; ALEXANDER, JEFFRY C. ; SELEEM, MOHAMED N. ; JAIN, NEETA ; SRIRANGANATHAN, NAMMALWAR ; WATTAM, ALICE R. ; Setubal, João C. ; BOYLE, STEPHEN M.. Peptide nucleic acids inhibit growth of Brucella suis in pure culture and in infected murine macrophages. International Journal of Antimicrobial Agents (Print). v. 41, p. 500, 2013. Qualis: A1
78.	RAMALLO, V. ; Bisso-Machado, R ; Bravi, CM ; COBLE, M. D. ; SALZANO, F. M. ; HÜNEMEIER, T. ; BORTOLINI, M. C.. Demographic expansions in South America: Enlightening a complex scenario with genetic and linguistic data. American Journal of Physical Anthropology. v. 00, p. 000-000, 2013. Qualis: A2
79.	RANGEL, L. T. ; Novaes, J. ; DURHAM, A. M. ; MADEIRA, A. M. B. N. ; GRUBER, A.. The Eimeria Transcript DB: an integrated resource for annotated transcripts of protozoan parasites of the genus Eimeria. DATABASE-OXFORD. v. 2013, p. bat006-bat006, 2013. Qualis: Não identificado (DATABASE-OXFORD)
80.	Ravindran, R. ; KHAN, N. ; NAKAYA, H. I. ; LI, S. ; LOEBBERMANN, J. ; MADDUR, M. S. ; PARK, Y. ; JONES, D. P. ; CHAPPERT, P. ; DAVOUST, J. ; WEISS, D. S. ; VIRGIN, H. W. ; RON, D. ; Pulendran, B.. Vaccine Activation of the Nutrient Sensor GCN2 in Dendritic Cells Enhances Antigen Presentation. Science (New York, N.Y.). v. press, p. press, 2013. Qualis: A1
81.	RIDLON, J. M. ; Alves, João M. ; HYLEMON, P. B. ; BAJAJ, J. S.. Cirrhosis, bile acids and gut microbiota: Unraveling a complex relationship. Gut Microbes. v. 4, p. 1-6, 2013. Qualis: A1
82.	RIDLON, J. M. ; IKEGAWA, S. ; Alves, João MP ; Zhou, B. ; Kobayashi, A. ; Iida, T. ; Mitamura, K. ; Tanabe, G. ; Serrano, Myrna G. ; De Guzman, A. ; Takamine, F. ; BUCK, G. A. ; HYLEMON, P. B.. Clostridium scindens: a human gut microbe with a high potential to convert glucocorticoids into androgens. Journal of Lipid Research (Print),. p. 1, 2013. Qualis: A2 (JOURNAL OF LIPID RESEARCH)
83.	ROCHA, CLARISSA RIBEIRO REILY ; LERNER, LETICIA KOCH ; OKAMOTO, OSWALDO KEITH ; MARCHETTO, MARIA CAROLINA ; Menck, Carlos Frederico Martins. The role of DNA repair in the pluripotency and differentiation of human stem cells. Mutation Research. Reviews in Mutation Research (Print). v. 752, p. 25-35, 2013. Qualis: Não identificado (REVIEWS IN MUTATION RESEARCH)
84.	RODRIGUES, M.G.F. ; MARTINS, A.B.G. ; BERTONI, B.W. ; FIGUEIRA, A. ; GIULIATTI, S.. Search for methylation-sensitive amplification polymorphisms in mutant figs. Genetics and Molecular Research. v. 12, p. 2267-2280, 2013. Qualis: B3
85.	SATO, João Ricardo ; TAKAHASHI, DANIEL YASUMASA ; Hoexter, Marcelo Queiroz ; MASSIRER, Katlin Brauer ; Fujita, André. Measuring network's entropy in ADHD: A new approach to investigate neuropsychiatric disorders. Neuroimage (Orlando, Fla. Print). v. 77, p. 44-51, 2013. Qualis: Não identificado (PRINT))
86.	SAYED, A. ; GHAZY, M. A. ; Ferreira, A. J. S. ; SETUBAL, J. C. ; CHAMBERGO, F. S. ; OUF, A. ; ADEL, M. ; DAWE, A. S. ; ARCHER, J. A. C. ; BAJIC, V. B. ; SIAM, R. ; El-Dorry, H.. A novel mercuric reductase from the unique deep brine environment of Atlantis II in the Red Sea. The Journal of Biological Chemistry (Print). v. 289, p. 1675-1687, 2013. Qualis: A1
87.	SCHUCH, A.P. ; GARCIA, CAMILA CARRIÃO MACHADO ; Makita, Kazuo ; MENCK CF. DNA damage as a biological sensor for environmental sunlight. Photochemical & Photobiological Sciences. v. 12, p. 1259-1272, 2013. Qualis: A3
88.	SEVERINO, PATRICIA ; OLIVEIRA, LILIANE ; TORRES, NATALIA ; ANDREGHETTO, FLAVIA ; DE FATIMA GUARIZO KLINGBEIL, MARIA ; MOYSES, RAQUEL ; WÜNSCH-FILHO, VICTOR ; NUNES, FABIO ; MATHOR, MONICA ; PASCHOAL, ALEXANDRE ; DURHAM, ALAN. High-throughput sequencing of small RNA transcriptomes reveals critical biological features targeted by microRNAs in cell models used for squamous cell cancer research. BMC Genomics. v. 14, p. 735, 2013. Qualis: A2
89.	Souza, Amanda P. ; GRANDIS, ADRIANA ; LEITE, DÉBORA C. C. ; Buckeridge, Marcos S.. Sugarcane as a Bioenergy Source: History, Performance, and Perspectives for Second-Generation Bioethanol. BioEnergy Research. v. 7, p. 24-35, 2013. Qualis: A1
90.	Takecian, Pedro L. ; OIKAWA, MARCIO K. ; BRAGHETTO, KELLY R. ; ROCHA, PAULO ; LUCENA, FRED ; KAVOUNIS, KATHERINE ; SCHLUMPF, KAREN S. ; ACKER, SUSAN ; CARNEIRO-PROIETTI, ANNA B.F. ; Sabino, Ester C. ; Custer, Brian ; Busch, Michael P. ; Ferreira, João E.. Methodological guidelines for reducing the complexity of data warehouse development for transactional blood bank systems. Decision Support Systems. v. 55, p. 728-739, 2013. Qualis: A1
91.	TAN, YAN ; TAMAYO, PABLO ; NAKAYA, HELDER ; Pulendran, Bali ; MESIROV, JILL P. ; HAINING, W. NICHOLAS. Gene signatures related to B-cell proliferation predict influenza vaccine-induced antibody response. European Journal of Immunology. v. press, p. n/a-n/a, 2013. Qualis: A2
92.	TEIXEIRA, F. R. ; MANFIOLLI, A. O. ; SOARES, C. S. ; BAQUI, M. M. A. ; KOIDE, T. ; Gomes, M. D.. The F-box Protein FBXO25 Promotes the Proteasome-dependent Degradation of ELK-1 Protein. Journal of Biological Chemistry (Online). v. 288, p. 28152-28162, 2013. Qualis: A1
93.	TURRA, ALEXANDER ; CRÓQUER, ALDO ; CARRANZA, ALVAR ; MANSILLA, ANDRÉS ; ARECES, ARSENIO J. ; WERLINGER, CAMILO ; MARTÍNEZ-BAYÓN, CARLOS ; NASSAR, CRISTINA APARECIDA GOMES ; PLASTINO, ESTELA ; SCHWINDT, EVANGELINA ; SCARABINO, FABRIZIO ; CHOW, FUNGYI ; FIGUEROA, FELIX LOPES ; BERCHEZ, FLÁVIO ; HALL-SPENCER, JASON M. ; SOTO, LUIS A. ; BUCKERIDGE, MARCOS SILVEIRA ; COPERTINO, MARGARETH S. ; DE SZÉCHY, MARIA TEREZA MENEZES ; GHILARDI-LOPES, NATALIA PIRANI. Global environmental changes: setting priorities for Latin American coastal habitats. Global Change Biology (Print). v. online, p. n/a-n/a, 2013. Qualis: A1
94.	VARANI, A. M. ; MONTEIRO-VITORELLO, C. B. ; NAKAYA, H. I. ; VANSLUYS MA. The Role of Prophage in Plant Pathogenic Bacteria. Annual Review of Phytopathology (Print). v. 51, p. 429, 2013. Qualis: A1
95.	BECKEDORFF, FELIPE C. ; AYUPE, ANA C. ; CROCCI-SOUZA, RENAN ; AMARAL, MURILO S. ; Nakaya, Helder I. ; SOLTYS, DANIELA T. ; MENCK, CARLOS F. M. ; Reis, Eduardo M. ; VERJOVSKI-ALMEIDA, Sergio. The Intronic Long Noncoding RNA ANRASSF1 Recruits PRC2 to the RASSF1A Promoter, Reducing the Expression of RASSF1A and Increasing Cell Proliferation. PLOS Genetics (Online). v. 9, p. e1003705, 2013. Qualis: A1
96.	FACHEL, Angela A ; Tahira, Ana C ; VILELLA-ARIAS, SANTIAGO A ; Maracaja-Coutinho, Vinicius ; GIMBA, ETEL RP ; Vignal, Giselle M ; CAMPOS, FRANZ S ; Reis, Eduardo M ; REIS, EM ; VERJOVSKI-ALMEIDA, Sergio. Expression analysis and in silico characterization of intronic long noncoding RNAs in renal cell carcinoma: emerging functional associations. Molecular Cancer. v. 12, p. 140, 2013. Qualis: A1
97.	Verjovski-Almeida, S.; MARTINS, L. F. ; ANTUNES, L. P. ; PASCON, R. C. ; OLIVEIRA, J. C. F. ; DIGIAMPIETRI, L. A. ; BARBOSA, D. ; PEIXOTO, B. M. ; VALLIM, M. A. ; VIANA-NIERO, C. ; OSTROSKI, E. H. ; TELLES, G. P. ; DIAS, Z. ; CRUZ, J. B. ; JULIANO, L. ; Verjovski-Almeida, S. ; DASILVA, A. M. ; SETUBAL, J. C.. Metagenomic Analysis of a Tropical Composting Operation at the São Paulo Zoo Park Reveals Diversity of Biomass Degradation Functions and Organisms. Plos One. v. 8, p. e61928, 2013. Qualis: A1
98.	Verjovski-Almeida, S.; ROFATTO, HENRIQUE K. ; ARAUJO-MONTOYA, BOGAR O. ; MIYASATO, PATRÍCIA A. ; LEVANO-GARCIA, JULIO ; RODRIGUEZ, DUNIA ; NAKANO, ELIANA ; Verjovski-Almeida, Sergio ; Farias, Leonardo P. ; LEITE, LUCIANA C.C.. Immunization with tegument nucleotidases associated with a subcurative praziquantel treatment reduces worm burden following Schistosoma mansoni challenge. PeerJ. v. 1, p. e58, 2013. Qualis: A2
99.	Vernhes, M. ; GONZÁLEZ-PUMARIEGA, MARIBEL ; SCHUCH, A. P. ; MENCK CF ; SCHUCH, A.P. ; SÁNCHEZ-LAMAR, ANGEL. El extracto acuoso de Phyllanthus orbiculares K protege al ADN plasmídico del daño inducido por las radiaciones ultravioletas. Ars Pharmaceutica. v. 54, p. 16-23, 2013.Qualis: Não identificado (ARS PHARMACEUTICA)
100.	VERNHES, MARIOLY ; GONZÁLEZ-PUMARIEGA, MARIBEL ; ANDRADE, LUCIANA ; SCHUCH, ANDRE PASSAGLIA ; de Lima-Bessa, Keronninn Moreno ; MENCK CF ; SÁNCHEZ-LAMAR, ANGEL. Protective effect of a Phyllanthus orbicularis aqueous extract against UVB light in human cells. Pharmaceutical Biology (Online). v. 51, p. 1-7, 2013. Qualis: A4
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102.	VILELLA-ARIAS, SANTIAGO A. ; ROCHA, RAFAEL MALAGOLI ; DA COSTA, WALTER HENRIQUES ; ZEQUI, STÊNIO DE CÁSSIO ; GUIMARÃES, GUSTAVO CARDOSO ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; SOARES, FERNANDO A. ; Reis, Eduardo M.. Loss of Caspase 7 Expression Is Associated With Poor Prognosis in Renal Cell Carcinoma Clear Cell Subtype. Urology (Ridgewood, N.J.). v. 82, p. 974.e1-974.e7, 2013. Qualis: A4
103.	WULFF, NELSON ARNO ; ZHANG, SHUJIAN ; Setubal, João C ; Almeida, Nalvo F ; MARTINS, ELAINE C ; Harakava, Ricardo ; KUMAR, DIBYENDU ; RANGEL, LUIZ T ; FOISSAC, XAVIER ; BOVE, JOSEPH ; GABRIEL, DEAN W. The complete genome sequence of Candidatus Liberibacter americanus, associated with citrus Huanglongbing.. Molecular Plant-Microbe Interactions. v. 27, p. 131107142521009, 2013. Qualis: A1

2012

1.	Agnez-Lima, Lucymara F. ; Melo, Julliane T.A. ; Silva, Acarízia E. ; Oliveira, Ana Helena S. ; Timoteo, Ana Rafaela S. ; Lima-Bessa, Keronninn M. ; Martinez, Glaucia R. ; Medeiros, Marisa H.G. ; Di Mascio, Paolo ; Galhardo, Rodrigo S. ; Menck, Carlos F.M.. DNA damage by singlet oxygen and cellular protective mechanisms. Mutation Research. Reviews in Mutation Research (Print). v. 751, p. 15-28, 2012. Qualis: Não identificado (REVIEWS IN MUTATION RESEARCH)
2.	ALMEIDA, CESAR C. ; BRENTANI, HELENA P. ; FORLENZA, ORESTES V. ; DINIZ, BRENO S.. Redução dos níveis séricos de ácido fólico em pacientes com a doença de Alzheimer. Revista de Psiquiatria Clínica (São Paulo. Impresso). v. 39, p. 90-93, 2012. Qualis: Não identificado (IMPRESSO))
3.	Almeida, Giulliana Tessarin ; Amaral, Murilo Sena ; Beckedorff, Felipe Cesar Ferrarezi ; Kitajima, João Paulo ; DEMARCO, Ricardo ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Exploring the Schistosoma mansoni adult male transcriptome using RNA-seq. Experimental Parasitology. v. 132, p. 22-31, 2012. Qualis: A4
4.	AMARAL, LOURDES ISABEL VELHO DO ; SANTOS, HENRIQUE P. ; ROSSATTO, DAVI RODRIGO ; BUCKERIDGE, MARCOS SILVEIRA. Diurnal changes in storage carbohydrate metabolism in cotyledons of the tropical tree Hymenaea courbaril L. (Leguminosae). Brazilian Journal of Botany. v. 35, p. 347-355, 2012. Qualis: B1
5.	Anderson, Letícia ; Pierce, Raymond J. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Schistosoma mansoni histones: From transcription to chromatin regulation; an in silico analysis. Molecular and Biochemical Parasitology (Print). v. 183, p. 105-114, 2012. Qualis: A4
6.	Andrade, L. N. d. S. ; Nathanson, J. L. ; Yeo, G. W. ; Menck, C. F. M. ; MUOTRI, A. R.. Evidence for premature aging due to oxidative stress in iPSCs from Cockayne syndrome. Human Molecular Genetics (Print). v. 21, p. 3825-3834, 2012. Qualis: A1
7.	ANDRIOLI, L. P. ; DIGIAMPIETRI, L.A. ; de BARROS, L. P. ; MACHADO-LIMA, A.. Huckebein is part of a combinatorial repression code in the anterior blastoderm. Developmental Biology (Print). v. 361, p. 177-185, 2012. Qualis: A2
8.	Aravind, L. ; Anantharaman, Vivek ; ZHANG, DAPENG ; De Souza, Robson F. ; Iyer, Lakshminarayan M.. Gene flow and biological conflict systems in the origin and evolution of eukaryotes. Frontiers in Cellular and Infection Microbiology. v. 2, p. 2235-2988, 2012. Qualis: A1
9.	BEGCY, KEVIN ; MARIANO, EDUARDO D. ; GENTILE, AGUSTINA ; Lembke, Carolina G. ; ZINGARETTI, SONIA MARLI ; Souza, Glaucia M. ; Menossi, Marcelo. A Novel Stress-Induced Sugarcane Gene Confers Tolerance to Drought, Salt and Oxidative Stress in Transgenic Tobacco Plants. Plos One. v. 7, p. e44697, 2012. Qualis: A1
10.	Bragatto, Juliano ; Segato, Fernando ; Cota, Junio ; Mello, Danilo B. ; Oliveira, Marcelo M. ; Buckeridge, Marcos S. ; Squina, Fabio M. ; Driemeier, Carlos ; BUCKERIDGE, M. S.. Insights on How the Activity of an Endoglucanase Is Affected by Physical Properties of Insoluble Celluloses. Journal of Physical Chemistry. B. v. 116, p. 6128-6136, 2012. Qualis: Não identificado (B)
11.	BRAGHETTO, K. R. ; FERREIRA, J. E. ; VINCENT, J.. Performance evaluation of resource-aware business processes using stochastic automata networks. INTERNATIONAL JOURNAL OF INNOVATIVE COMPUTING, INFORMATION & CONTROL. v. v.8, p. 5295-5316, 2012.Qualis: A4
12.	BUCKERIDGE, MARCOS S.; Braga, Marcia R.. Sonia Dietrich: a life dedicated to science. Brazilian Journal of Botany. v. 35, p. 00-00, 2012. Qualis: B1
13.	Buckeridge, Marcos S.; Souza, Amanda P. ; Arundale, Rebecca A. ; Anderson-Teixeira, Kristina J. ; DeLucia, Evan. Ethanol from sugarcane in Brazil: a `midway¿ strategy for increasing ethanol production while maximizing environmental benefits. GCB BIOENERGY. v. 4, p. 119-126, 2012. Qualis: Não identificado (GCB BIOENERGY)
14.	Campbell, Desmond D. ; Parra, Maria V. ; Duque, Constanza ; Gallego, Natalia ; Franco, Liliana ; Tandon, Arti ; Hünemeier, Tábita ; Bortolini, Cátira ; Villegas, Alberto ; Bedoya, Gabriel ; McCarthy, Mark I. ; Price, Alkes ; Reich, David ; Ruiz-Linares, Andrés. Amerind Ancestry, Socioeconomic Status and the Genetics of Type 2 Diabetes in a Colombian Population. Plos One. v. 7, p. e33570, 2012. Qualis: A1
15.	Campos, Antonio Hugo Jose Froes Marques ; Brentani, Helena ; Olivieri, Eloisa Ribeiro ; Carraro, Dirce Maria ; Patrão, Diogo ; Mota, Louise Danielle De Carvalho ; Brentani, Ricardo Renzo ; Soares, Fernando Augusto ; Camargo, Luiz Paulo ; Prescinoti, Vera Cristina ; Silva, Andre Abreu. The Value of a Tumor Bank in the Development of Cancer Research in Brazil: 13 Years of Experience at the A C Camargo Hospital. Biopreservation and Biobanking. v. 10, p. 168-173, 2012. Qualis: A4
16.	Cappi, Carolina ; Muniz, Renan Kawano ; Sampaio, Aline Santos ; Cordeiro, Quirino ; BRENTANI, H. ; Palácios, Selma A. ; Marques, Andrea H. ; Vallada, Homero ; Miguel, Eurípedes Constantino ; Guilherme, Luiza ; Hounie, Ana Gabriela. Association study between functional polymorphisms in the TNF-alpha gene and obsessive-compulsive disorder. Arquivos de Neuro-Psiquiatria (Impresso). v. 70, p. 87-90, 2012. Qualis: B2
17.	Cerqueira, Caio C S ; Paixão-Côrtes, Vanessa R ; Zambra, Francis M B ; Salzano, Francisco M ; Hünemeier, Tábita ; Bortolini, Maria-Cátira. Predicting homo pigmentation phenotype through genomic data: From neanderthal to James Watson. American Journal of Human Biology,. p. n/a-n/a, 2012. Qualis: A1 (AMERICAN JOURNAL OF HUMAN BIOLOGY)
18.	Chen S. ; Ni X. ; KRINSKY, B.H. ; ZHANG, Y. ; VIBRANOVSKI, M. D. ; White K.P. ; LONG, M.. Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene. EMBO Journal (Print). v. 31, p. 2798-2809, 2012. Qualis: A1
19.	Damásio, André R.L. ; Ribeiro, Liliane F.C. ; Ribeiro, Lucas F. ; Furtado, Gilvan P. ; Segato, Fernando ; Almeida, Fausto B.R. ; Crivellari, Augusto C. ; BUCKERIDGE, M. S. ; Souza, Tatiana A.C.B. ; Murakami, Mário T. ; Ward, Richard J. ; Prade, Rolf A. ; Polizeli, Maria L.T.M.. Functional characterization and oligomerization of a recombinant xyloglucan-specific endo-ß-1,4-glucanase (GH12) from Aspergillus niveus. Biochimica et Biophysica Acta. Proteins and Proteomics. v. 1824, p. 461-467, 2012. Qualis: Não identificado (PROTEINS AND PROTEOMICS)
20.	de Mendonça, Patrícia Calligioni ; Bertoni, Bianca Waléria ; Amui, Saulo França ; Giuliatti, Silvana ; Corrêa, Valéria Sieiro Conde ; França, Suzelei de Castro ; Pereira, Ana Maria Soares. Genetic diversity of Stryphnodendron adstringens (Mart.) Coville determined by AFLP molecular markers. Biochemical Systematics and Ecology. v. 41, p. 16-20, 2012. Qualis: B1
21.	de OLIVEIRA, K. C. ; NERY, F. G. ; FERRETI, R. E. L. ; LIMA, M. C. ; CAPPI, C. ; MACHADO-LIMA, A. ; POLICHISO, L. ; CARREIRA, L. L. ; AVILA, C. ; ALHO, A. T. D. L. ; BRENTANI, H. P. ; MIGUEL, E. C. ; HEISEN, H. ; JACOB FILHO, W. ; PASQUALUCCI, C. A. ; LAFER, B. ; GRINBERG, L. T.. Brazilian psychiatric brain bank: a new contribution tool to network studies. Cell and Tissue Banking. v. 13, p. 315-326, 2012. Qualis: A4
22.	de SOUZA, Robson Francisco; Aravind, L.. Identification of novel components of NAD-utilizing metabolic pathways and prediction of their biochemical functions. Molecular Biosystems (Print). v. 8, p. 1661, 2012. Qualis: A3
23.	Dias, Zanoni ; Dias, Ulisses ; Setubal, Joao C. SIS: a program to generate draft genome sequence scaffolds for prokaryotes. BMC Bioinformatics. v. 13, p. 96, 2012. Qualis: A1
24.	do Nascimento, N. C. ; GUIMARAES, A. M. S. ; Santos, A. P. ; SanMiguel, P. J. ; MESSICK, J. B.. Complete Genome Sequence of Mycoplasma haemocanis Strain Illinois. Journal of Bacteriology (Print). v. 194, p. 1605-1606, 2012. Qualis: A3
25.	do Nascimento, Naila C ; Santos, Andrea P ; Guimaraes, Ana MS ; SanMiguel, Phillip J ; Messick, Joanne B. Mycoplasma haemocanis -- the canine hemoplasma and its feline counterpart in the genomic era. Veterinary Research. v. 43, p. 66, 2012. Qualis: A1
26.	Domingues, Douglas S ; Cruz, Guilherme MQ ; Metcalfe, Cushla J ; Nogueira, Fabio TS ; Vicentini, Renato ; de S Alves, Cristiane ; Van Sluys, Marie-Anne. Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns. BMC GENOMICS. v. 13, p. 137, 2012. Qualis: A2
27.	Dos Santos, Patricia C ; Fang, Zhong ; Mason, Steven W ; Setubal, João C ; Dixon, Ray. Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes. BMC Genomics. v. 13, p. 162, 2012. Qualis: A2
28.	dos Santos, W.D ; LOPES, A. F. ; BARONI, A. M. ; ALCÂNTARA, P. H. N. ; BUCKERIDGE, M. S.. Penicilium citrinum polysaccharidases. Journal of Agronomical Sciences. v. 1, p. 139-152, 2012.Qualis: C (JOURNAL OF AGRONOMIC SCIENCES)
29.	DRIEMEIER, C. ; Driemeier, Carlos ; Santos, Wanderley D. ; BUCKERIDGE, M. S.. Cellulose crystals in fibrovascular bundles of sugarcane culms: orientation, size, distortion, and variability. Cellulose (London). v. 19, p. 1-1508, 2012. Qualis: A1
30.	FERREIRA, J. E.; ARAUJO, L. V. ; BRAGHETTO, K. R. ; ITALIANO, I. C. ; OIKAWA, M. K. ; Takecian, P. L.. Long Lived Transaction Processing for Business Processes and Scientific Workflows. Journal of Information and Data Management - JIDM. v. 3, p. 33-50, 2012.Qualis: B3
31.	Fettweis, J.M. ; SERRANO, M. G. ; Nihar Sheth ; Carly Mayer ; Abigail L. Glascock ; Brooks, J.P. ; Jefferson, Kimberly K ; Alves, João M. P. ; Vaginal Microbiome Consortium ; BUCK, G. A.. Species-level classification of the vaginal microbiome. BMC Genomics. v. 13, p. S17, 2012. Qualis: A2
32.	FUJITA, A; SEVERINO, P. ; Kojima K ; SATO, João Ricardo ; PATRIOTA, A. G. ; Miyano, Satoru. Functional clustering of time series gene expression data by Granger causality. BMC Systems Biology. v. 6, p. 137, 2012. Qualis: A1
33.	GARCIA, M. O. ; BRAGHETTO, K. R. ; PU, C. ; FERREIRA, J. E.. An Implementation of a Transaction Model for Business Process Systems. Journal of Information and Data Management - JIDM. v. 3, p. 271, 2012.Qualis: B3
34.	GOMEZ-VALDES, J. ; HÜNEMEIER, T. ; Contini V ; ACUNA-ALONZO, V. ; MACIN, G. ; Ballesteros, M ; CORRAL-MONTANES, P. ; RUIZ-LINARES, A ; SANCHEZ-MEJORADA, G. ; CANIZALES-QUINTEROS, S. ; MARTINEZ-ABADIAS, N. ; SALZANO, F. M. ; GONZALEZ-JOSE, R. ; BORTOLINI, M. C.. Fibroblast growth factor receptor 1 ( FGFR1 ) variants and craniofacial variation in Amerindians and related populations. American Journal of Human Biology. v. 1, p. n/a-n/a, 2012. Qualis: A1
35.	Goncalez, Thelma T. ; Sabino, Ester C. ; Capuani, Ligia ; Liu, Jing ; Wright, David J. ; Walsh, Judy H. ; FERREIRA, JOAO E. ; Chamone, Dalton A. ; Busch, Michael P. ; Custer, Brian. Blood transfusion utilization and recipient survival at Hospital das Clinicas in São Paulo, Brazil. Transfusion (Arlington, Va.). v. 52, p. 729-738, 2012. Qualis: A3
36.	GUARDIA, G. D. A. ; VÊNCIO, R.Z.N. ; de FARIAS, C. R. G.. A UML Profile for the OBO Relation Ontology. BMC Genomics. v. 13, p. S3, 2012. Qualis: A2
37.	GUIMARAES, A. M. S.; Toth, B. ; Santos, A. P. ; do Nascimento, N. C. ; KRITCHEVSKY, J. E. ; MESSICK, J. B.. Genome Sequence of 'Candidatus Mycoplasma haemolamae' Strain Purdue, a Red Blood Cell Pathogen of Alpacas (Vicugna pacos) and Llamas (Lama glama). Journal of Bacteriology (Print). v. 194, p. 6312-6313, 2012. Qualis: A3
38.	Harwich, Michael D ; Serrano, Myrna G. ; Fettweis, J.M. ; Alves, João M. P. ; Mark A. Reimers ; Vaginal Microbiome Consortium ; Buck, Gregory A ; Jefferson, Kimberly K. Genomic sequence analysis and characterization of Sneathia amnii sp. nov. BMC Genomics. v. 13, p. S4, 2012. Qualis: A2
39.	HORIMOTO, ANDRÉA RVR ; OLIVEIRA, CAMILA M ; GIOLO, SUELY R ; SOLER, JÚLIA P ; DE ANDRADE, MARIZA ; KRIEGER, JOSÉ E ; PEREIRA, ALEXANDRE C. Genetic analyses of smoking initiation, persistence, quantity, and age-at-onset of regular cigarette use in Brazilian families: the Baependi Heart Study. BMC Medical Genetics (Online). v. 13, p. 9, 2012. Qualis: A4
40.	HÜNEMEIER, T.; Amorim, CEG ; AZEVEDO, S. ; Contini V ; Rothhammer F ; Dugoujon JM ; Mazières S ; BARRANTES, R. ; Villarreal-Molina MT ; PAIXAO-CORTES, V. R. ; SALZANO, F. M. ; CANIZALES-QUINTEROS, S. ; RUIZ-LINARES, A ; BORTOLINI, M. C.. Evolutionary Responses to a Constructed Niche: Ancient Mesoamericans as a Model of Gene-Culture Coevolution. Plos One. v. 7, p. e38862-e38862, 2012. Qualis: A1
41.	HÜNEMEIER, T.; GOMEZ-VALDES, J. ; Ballesteros, M ; AZEVEDO, S. ; MARTINEZ-ABADIAS, N. ; Esparza, M ; SJOVOLD, T. ; BONATTO, S. L. ; SALZANO, F. M. ; BORTOLINI, M. C. ; GONZALEZ-JOSE, R.. Cultural diversification promotes rapid phenotypic evolution in Xavante Indians. Proceedings of the National Academy of Sciences of the United States of America. v. 109, p. 73-77, 2012. Qualis: A1
42.	Jesus, Erika M. ; Ochoa Cruz, Edgar A. ; Cruz, Guilherme M. Q. ; Van Sluys, Marie-Anne. Diversification of hAT transposase paralogues in the sugarcane genome. MOLECULAR GENETICS AND GENOMICS. v. 287, p. 205-219, 2012. Qualis: A4
43.	JOLY, C. A. ; BERLINCK, R. G. S. ; BOLZANI, V. S. ; HADDAD, C. F. B. ; OLIVEIRA, M. C. ; VAN SLUYS, MARIE-ANNE ; SOUZA, G. M. ; VERDADE, L. M. ; VICTORIA, R. L.. Principais conclusões do workshop conjunto dos programas FAPESP BIOTA-BIOEN-Mudanças Climáticas: ciência e políticas públicas para uma economia mais verde, no contexto da RIO+20. Biota Neotropica. v. 12(2), p. 19-21, 2012.Qualis: B1
44.	Jones, Crystal L. ; Sampson, Timothy R. ; Nakaya, Helder I. ; Pulendran, Bali ; Weiss, David S.. Repression of Bacterial Lipoprotein Production by F. novicida Facilitates Evasion of Innate Immune Recognition. Cellular Microbiology (Print). v. 15, p. n/a-n/a, 2012. Qualis: A2
45.	KAJIHARA, D. ; Godoy F ; Hamaji TA ; BLANCO, S. R. ; VANSLUYS, M A ; SLUYS MAV. ; ROSSI, M.. Functional characterization of sugarcane mustang domesticated transposases and comparative diversity in sugarcane, rice, maize and sorghum. Genetics and Molecular Biology (Impresso). v. 35, p. 632-639, 2012.Qualis: A4
46.	KOJIMA, KANAME ; Imoto, Seiya ; Yamaguchi, Rui ; Fujita, André ; Yamauchi, Mai ; Gotoh, Noriko ; Miyano, Satoru. Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing. BMC Genomics. v. 13, p. S6, 2012. Qualis: A2
47.	Krepischi, Ana C V ; Achatz, Maria Isabel W ; Santos, Erika M M ; Costa, Silvia S ; Lisboa, Bianca C G ; Brentani, Helena ; Santos, Tiago M ; Goncalves, Amanda ; Nobrega, Amanda F ; Pearson, Peter L ; Vianna-Morgante, Angela M ; Carraro, Dirce M ; Brentani, Ricardo R ; Rosenberg, Carla. Germline DNA copy number variation in familial and early-onset breast cancer. Breast Cancer Research (Print). v. 14, p. R24, 2012. Qualis: A1
48.	Kwissa, M. ; NAKAYA, H. I. ; Oluoch, H. ; Pulendran, B.. Distinct TLR adjuvants differentially stimulate systemic and local innate immune responses in non-human primates. Blood (Philadelphia, PA). v. 119, p. n/a, 2012. Qualis: A1
49.	Lembke, Carolina G. ; Nishiyama, Milton Y ; Sato, Paloma M. ; SOUZA, G. M.. Identification of sense and antisense transcripts regulated by drought in sugarcane. Plant Molecular Biology. v. 79(4-5, p. 461-477, 2012. Qualis: A1
50.	LIMA, L. A. ; RIS, M. ; BARRERA, J. ; BRENTANI, M. M. ; Brentani, Helena. Computing a predictor set influence zone through a multi-laser genetic network to explore the role of estrogen in breast cance. Advances in Breast Cancer Research. v. 1, p. 29-29, 2012.Qualis: Não identificado (ADVANCES IN BREAST CANCER RESEARCH)
51.	Lima, Luciana ; Ortiz, Paola A. ; da Silva, Flávia Maia ; Alves, João Marcelo P. ; Serrano, Myrna G. ; Cortez, Alane P. ; Alfieri, Silvia C. ; Buck, Gregory A. ; Teixeira, Marta M. G.. Repertoire, Genealogy and Genomic Organization of Cruzipain and Homologous Genes in Trypanosoma cruzi, T. cruzi-Like and Other Trypanosome Species. Plos One. v. 7, p. e38385, 2012. Qualis: A1
52.	MACHADO, BIRAJARA SOARES ; KUNICKI, ANA CAROLINA BIONE ; MORYA, EDGARD ; Sameshima, Koichi. Spectral characteristics of the hippocampal LFP during contextual fear conditioning. Einstein (São Paulo). v. 10, p. 140-144, 2012. Qualis: B1
53.	Manetti, M. E. ; ROSSI, M. ; CRUZ, G. M. Q. ; SACCARO, N. L. ; NAKABASHI, M. ; ALTEBARMAKIAN, V. ; RODIER-GOUD, M. ; DOMINGUES, D. ; D?HONT, A. ; SLUYS, M. A.. Mutator System Derivatives Isolated from Sugarcane Genome Sequence. Tropical Plant Biology. v. 5, p. 233-243, 2012. Qualis: A3
54.	Manque, Patricio A. ; Woehlbier, Ute ; Lara, Ana M. ; Tenjo, Fernando ; Alves, João M. ; Buck, Gregory A.. Identification and Characterization of a Novel Calcium-Activated Apyrase from Cryptosporidium Parasites and Its Potential Role in Pathogenesis. Plos One. v. 7, p. e31030, 2012. Qualis: A1
55.	MARTINS, ALINE REDONDO ; CARMELLO-GUERREIRO, SANDRA MARIA ; BUCKERIDGE, MARCOS SILVEIRA ; SILVA, CLOVIS OLIVEIRA ; APPEZZATO-DA-GLÓRIA, BEATRIZ. Seed ontogeny and endosperm chemical analysis in Smilax polyantha (Smilacaceae). Australian Journal of Botany (Print). v. 60, p. 693-699, 2012. Qualis: A4
56.	MARTINS, CAMILA MARINELLI ; Mohamed, Ahmed ; GUIMARÃES, ANA MARCIA SÁ ; DE BARROS, CRISTIANE DA CONCEIÇÃO ; PAMPUCH, RAQUEL DOS SANTOS ; SVOBODA, WALFRIDO ; GARCIA, RITA DE CASSIA MARIA ; FERREIRA, FERNANDO ; Biondo, Alexander Welker. Impact of demographic characteristics in pet ownership: Modeling animal count according to owners income and age. Preventive Veterinary Medicine (Print). v. 107, p. 1, 2012. Qualis: A1
57.	Maschietto, Mariana ; Silva, Aderbal R. ; Puga, Renato D. ; Lima, Leandro ; Pereira, Carlos B. ; Nakano, Eduardo Y. ; Mello, Barbara ; Gama, Clarissa S. ; Belmonte-de-Abreu, Paulo ; Carraro, Dirce M. ; Palha, Joana A. ; Brentani, Helena. Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls. Psychiatry Research (Print). v. 200, p. 1018-1021, 2012. Qualis: A4
58.	MASSARO, J. D. ; EVANGELISTA, A. F. ; CASTELLI, E. C. ; Giuliatti, S. ; DONADI, E. A.. In Silico Analysis of HLA-G Promoter Region to Identify DNA Elements Near to SNPS and Transcription Alterations Evidences. Tissue Antigens. v. 80, p. 100-100, 2012.Qualis: Não identificado (TISSUE ANTIGENS)
59.	Moraes, Maria Carolina S. ; Andrade, Annabel Quinet de ; Carvalho, Helotonio ; Guecheva, Temenouga ; Agnoletto, Mateus H. ; Henriques, João A.P. ; Sarasin, Alain ; Stary, Anne ; Saffid, Jenifer Saffid ; Menck, Carlos F.M.. Both XPA and DNA polymerase eta are necessary for the repair of doxorubicin-induced DNA lesions. Cancer Letters (Print). v. 314, p. 108-118, 2012. Qualis: A1
60.	Moraes, Maria Carolina Strano ; Cabral Neto, Januario Bispo ; Menck, Carlos Frederico Martins. DNA repair mechanisms protect our genome from carcinogenesis. Frontiers in Bioscience (Print). v. 17, p. 1362-1388, 2012. Qualis: A3
61.	MORAIS, ENYARA R. ; Oliveira, Katia C. ; MAGALHÃES, LIZANDRA G. ; MOREIRA, ÉRIKA B.C. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; RODRIGUES, Vanderlei. Effects of curcumin on the parasite Schistosoma mansoni: A transcriptomic approach. Molecular and Biochemical Parasitology (Print). v. 187, p. 91-97, 2012. Qualis: A4
62.	Nagasaki, M. ; FUJITA, A. ; SEKIYA, Y. ; SAITO, A. ; IKEDA, E. ; LI, C. ; Miyano, S.. XiP: a computational environment to create, extend and share workflows. Bioinformatics (Oxford. Print). v. 29, p. 137-139, 2012. Qualis: Não identificado (PRINT))
63.	Nakaya, Helder I.; Pulendran, Bali. Systems vaccinology. Current Opinion in HIV and AIDS (Print). v. 7, p. 24-31, 2012. Qualis: Não identificado (CURRENT OPINION IN HIV AND AIDS)
64.	Nakaya, Helder I; Gardner, Joy ; Poo, Yee-Suan ; Major, Lee ; Pulendran, Bali ; Suhrbier, Andreas. Gene profiling of chikungunya virus arthritis reveals significant overlap with rheumatoid arthritis. Arthritis and Rheumatism. v. 64, p. n/a-n/a, 2012. Qualis: Não identificado (ARTHRITIS AND RHEUMATISM)
65.	Novaes, Jeniffer ; RANGEL, L. T. L. D. ; FERRO, M. ; Abe, Ricardo Y. ; Manha, Alessandra P.S. ; de Mello, Joana C.M. ; Varuzza, Leonardo ; DURHAM, A. M. ; Madeira, Alda Maria B.N. ; Gruber, Arthur. A comparative transcriptome analysis reveals expression profiles conserved across three Eimeria spp. of domestic fowl and associated with multiple developmental stages. International Journal for Parasitology. v. 42, p. 39-48, 2012. Qualis: A1
66.	Oliveira, Katia C. ; Carvalho, Mariana L.P. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; LoVerde, Philip T.. Effect of human TGF-β on the gene expression profile of Schistosoma mansoni adult worms. Molecular and Biochemical Parasitology (Print). v. 183, p. 132-139, 2012. Qualis: A4
67.	OLIVEIRA, S. T. ; Messick, J.B. ; Biondo, Alexander W. ; Santos, A. P. ; STEDILE, R. ; DALMOLIN, M. L. ; Guimaraes, A.M.S. ; MOHAMED, A. ; RIEDIGER, I. ; GONZALEZ, F. H. D.. Exposure to Leptospira spp. in sick dogs, shelter dogs and dogs from an endemic area: points to consider. Acta Scientiae Veterinariae (Online). v. 40, p. 1056, 2012.Qualis: Não identificado (IN SICK DOGS, SHELTER DOGS AND DOGS FROM AN ENDEMIC AREA: POINTS TO CONSIDER. ACTA SCIENTIAE VETERINARIAE)
68.	PAIXAO-CORTES, V. R. ; VISCARDI, L. ; SALZANO, F. M. ; HÜNEMEIER, T. ; BORTOLINI, M. C.. Homo sapiens, Homo neanderthalensis and the Denisova specimen: new insights on their evolutionary histories using whole-genome comparisons. Genetics and Molecular Biology (Impresso). v. 35, p. 904-911, 2012. Qualis: A4
69.	Palhares, Alessandra C ; Maccheroni, Walter ; Souza, Anete P ; Marconi, Thiago G ; Mollinari, Marcelo ; Gazaffi, Rodrigo ; Garcia, Antonio Augusto F ; Vieira, Maria Lucia Carneiro ; Rodrigues-Morais, Taislene B ; Jordão, Hamilton ; Van Sluys, Marie-Anne ; Domingues, Douglas S. A novel linkage map of sugarcane with evidence for clustering of retrotransposon-based markers. BMC Genetics (Online). v. 13, p. 51, 2012. Qualis: A3
70.	Patavino, Giuseppina Maria ; De Almeida-Neto, Cesar ; Liu, Jing ; Wright, David J. ; Mendrone-Junior, Alfredo ; Ferreira, Maria Inês Lopes ; de Freitas Carneiro, Anna Bárbara ; Custer, Brian ; Ferreira, João Eduardo ; Busch, Michael P. ; Sabino, Ester Cerdeira. Number of recent sexual partners among blood donors in Brazil: associations with donor demographics, donation characteristics, and infectious disease markers. Transfusion (Arlington, Va.). v. 52, p. 151-159, 2012. Qualis: A3
71.	REICH, D. ; Patterson, N ; Campbell D ; Mazières S ; Ray, N ; Parra, Maria V. ; Rojas, W ; Duque, Constanza ; Mesa, N ; García, LF ; Triana, O ; Blair, S ; Maestre, A ; Dib, JC ; Bravi, CM ; Bailliet, G ; Corach, D ; HÜNEMEIER, T. ; BORTOLINI, M. C. ; SALZANO, F. M.. Reconstructing Native American population history. Nature (London). v. 00, p. 00-00, 2012. Qualis: A1
72.	Reis, Eduardo M. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Perspectives of Long Non-Coding RNAs in Cancer Diagnostics. Frontiers in Genetics. v. 3, p. 1-8, 2012. Qualis: A2
73.	RODRIGUES, T. C. ; CARVALHO, F. ; Verjovski-Almeida, S. ; Krepischi, A. C. V. ; Rosenberg, C.. Abstract 1168: Identification of CNA signatures in prostate cancer: Narrowing chromosome regions related with occurrence, prognosis and recurrence after treatment. Cancer Research (Chicago, Ill.). v. 72, p. 1168, 2012. Qualis: A1
74.	Sabino, Ester C. ; Gonçalez, Thelma T. ; Carneiro-Proietti, Anna Bárbara ; Sarr, Moussa ; Ferreira, João Eduardo ; Sampaio, Divaldo A. ; Salles, Nanci A. ; Wright, David J. ; Custer, Brian ; Busch, Michael ; FOR THE NHLBI RETROVIRUS EPIDEMIOLOGY DONOR STUDY-II (REDS-II), INTERNATIONAL COMPONENT. Human immunodeficiency virus prevalence, incidence, and residual risk of transmission by transfusions at Retrovirus Epidemiology Donor Study-II blood centers in Brazil. Transfusion (Arlington, Va.). v. 52, p. 870-879, 2012. Qualis: A3
75.	SALLES, IVAN S. ; BUCKERIDGE, MARCOS S.. Cronobiologia vegetal: aspectos fisiológicos de um relógio verde. Revista da Biologia. v. 9, p. 45-49, 2012. Qualis: B4
76.	SALLES, IVAN S. ; BUCKERIDGE, MARCOS S.. Coordenação temporal da degradação das reservas dos cotilédones de jatobá (Himenaea courbaril L.). Revista da Biologia. v. 9, p. 50-52, 2012. Qualis: B4
77.	Santos, A. P. ; GUIMARÃES, A. M. S. ; do Nascimento, Naila C ; SanMiguel, Phillip ; Messick, Joanne B. Complete Genome Sequence of Mycoplasma wenyonii Strain Massachusetts. Journal of Bacteriology (Print). v. 194, p. 5458-5459, 2012.Qualis: A3
78.	SANTOS, W. D. ; Adriana Froutman Lopes ; BARONI, A. M. ; Alcântara, P. H. N. ; BUCKERIDGE, M. S.. Penicillium citrinum Polysaccharidases. Journal of Agronomical Sciences. v. 1, p. 139-152-152, 2012.Qualis: C (JOURNAL OF AGRONOMIC SCIENCES)
79.	Sato, João Ricardo ; FUJITA, A. ; Hoexter, Marcelo Queiroz ; Rohde, Luis Augusto. Evaluation of Pattern Recognition and Feature Extraction Methods in ADHD Prediction. Frontiers in Systems Neuroscience. v. 6, p. 1, 2012. Qualis: A1
80.	Schuch, André Passaglia ; Lago, Juliana Carvalhães ; Yagura, Teiti ; Menck, Carlos Frederico Martins. DNA Dosimetry Assessment for Sunscreen Genotoxic Photoprotection. Plos One. v. 7, p. e40344, 2012. Qualis: A1
81.	Schuch, André Passaglia ; Yagura, Teiti ; Makita, Kazuo ; Yamamoto, Hiromasa ; Schuch, Nelson Jorge ; Agnez-Lima, Lucymara Fassarella ; MacMahon, Ricardo Monreal ; Menck, Carlos Frederico Martins. DNA damage profiles induced by sunlight at different latitudes. Environmental and Molecular Mutagenesis (Print). v. 53, p. 198-206, 2012. Qualis: A3
82.	SEBOLLELA, A. ; FREITAS-CORREA, L. ; Oliveira, F. F. ; Paula-Lima, A. C. ; Saraiva, L. M. ; Martins, S. M. ; Carvalho Mota, L. D. ; Torres, C. ; Alves-Leon, S. ; de Souza, J. M. ; CARRARO, D. M. ; BRENTANI, H. ; De Felice, F. G. ; FERREIRA, S. T.. Amyloid- oligomers induce differential gene expression in adult human brain slices. The Journal of Biological Chemistry (Print). v. 287, p. 7436-7445, 2012. Qualis: A1
83.	SILVA, ADERBAL R. T. ; GRINBERG, LEA T. ; FARFEL, JOSE M. ; DINIZ, BRENO S. ; LIMA, LEANDRO A. ; SILVA, PAULO J. S. ; FERRETTI, RENATA E. L. ; ROCHA, RAFAEL M. ; FILHO, WILSON JACOB ; Carraro, Dirce M. ; BRENTANI, HELENA ; GINSBERG, STEPHEN D.. Transcriptional Alterations Related to Neuropathology and Clinical Manifestation of Alzheimer¿s Disease. Plos One. v. 7, p. e48751, 2012. Qualis: A1
84.	SLATER, S. ; Setubal, Joao C ; HOUMIEL, K. ; SUN, J. ; KAUL, R. ; GOLDMAN, B. ; FARRAND, S. ; Almeida, Nalvo F ; BURR, T. ; NESTER, E. W. ; RHOADS, D. ; WELCH, R. ; WOOD, Derek W.. The Genome of Agrobacterium tumefaciens C58: Reconciliation of sequence data, updated annotation, and distribution of linear chromosome in genus Agrobacterium.. Applied and Environmental Microbiology (Print),. p. 1414-1417, 2012. Qualis: A1 (APPLIED AND ENVIRONMENTAL MICROBIOLOGY)
85.	SOLTYS, DANIELA T. ; ROCHA, CLARISSA R.R. ; LERNER, LETÍCIA K. ; DE SOUZA, TIAGO A. ; MUNFORD, VERIDIANA ; CABRAL, FERNANDA ; NARDO, TIZIANA ; STEFANINI, MIRIA ; Sarasin, Alain ; CABRAL-NETO, JANUÁRIO B. ; Menck, Carlos F.M.. Novel XPG ( ERCC5 ) mutations affect DNA repair and cell survival after ultraviolet but not oxidative stress. Human Mutation. v. 34, p. 481-489, 2012. Qualis: A2
86.	TAKAHASHI, D. Y. ; SATO, João Ricardo ; FERREIRA, Carlos Eduardo ; FUJITA, A. Discriminating Different Classes of Biological Networks by Analyzing the Graphs Spectra Distribution. Plos One. v. 7, p. e49949, 2012. Qualis: A1
87.	Ullmann, Leila Sabrina ; Hoffmann, Juliano Leônidas ; de Moraes, Wanderlei ; Cubas, Zalmir Silvino ; dos Santos, Leonilda Correia ; da Silva, Rodrigo Costa ; MOREIRA, N. ; GUIMARÃES, A. M. S. ; CAMOSSI, L. G. ; Langoni, Helio ; Biondo, Alexander W.. Serologic Survey for Leptospira spp. in Captive Neotropical Felids in Foz do Iguaçu, Paraná, Brazil. Journal of Zoo and Wildlife Medicine. v. 43, p. 223-228, 2012.Qualis: Não identificado (IN CAPTIVE NEOTROPICAL FELIDS IN FOZ DO IGUAÇU, PARANÁ, BRAZIL. JOURNAL OF ZOO AND WILDLIFE MEDICINE)
88.	Varani, Alessandro M. ; MONTEIRO-VITORELLO, CLAUDIA B. ; ALMEIDA, LUIZ G.P. DE ; SOUZA, RANGEL C. ; CUNHA, OBERDAN L. ; Lima, Wanessa C. ; Civerolo, Edwin ; SLUYS, MARIE-ANNE VAN ; VASCONCELOS, ANA T.R.. Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains. Genetics and Molecular Biology (Impresso). v. 35, p. 149-152, 2012. Qualis: A4
89.	VARANI, ALESSANDRO M. ; MONTEIRO-VITORELLO, CLAUDIA BARROS ; Nakaya, Helder I. ; Van Sluys, Marie-Anne. The Role of Prophage in Plant-Pathogenic Bacteria. Annual Review of Phytopathology (Print). v. 51, p. 130531172133008, 2012. Qualis: A1
90.	Verjovski-Almeida, S.; Paschoal, Alexandre Rossi ; Maracaja-Coutinho, Vinicius ; Setubal, João Carlos ; Simões, Zilá Luz Paulino ; Verjovski-Almeida, Sergio ; Durham, Alan Mitchell. Non-coding transcription characterization and annotation: A guide and web resource for non-coding RNA databases. RNA Biology. v. 9, p. 274-282, 2012. Qualis: A2
91.	VIBRANOVSKI, M. D.; ZHANG, Y. ; KEMKEMER, C. ; LOPES, H. F. ; KARR, T. L. ; LONG, M.. Re-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome. BMC Biology. v. 10, p. 49, 2012. Qualis: A1
92.	VIBRANOVSKI, M. D.; ZHANG, Y. ; KEMKEMER, C. ; VANKUREN, N. W. ; LOPES, H. F. ; Karr T.L. ; LONG, M.. Segmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes. BMC Evolutionary Biology (Online). v. 12, p. 169, 2012. Qualis: A1
93.	VICENTE, F. F. R. ; LOPES, F. M. ; HASHIMOTO, R. F. ; CESAR JUNIOR, R. M.. Assessing the Gain of Biological Data Integration in Gene Networks Inference. BMC Genomics. v. 13, p. 1-12, 2012. Qualis: A2
94.	VICENTINI, R. ; NOGUEIRA, F. T. S. ; Vincentz, M. ; BEM, L. E. V. ; SLUYS, M. A.. Gene Content Analysis of Sugarcane Public ESTs Reveals Thousands of Missing Coding-Genes and an Unexpected Pool of Grasses Conserved ncRNAs. Tropical Plant Biology (Online). v. 1, p. 1, 2012. Qualis: A3
95.	WANG, JUN ; LONG, MANYUAN ; VIBRANOVSKI, MARIA D.. Retrogenes Moved Out of the Z Chromosome in the Silkworm. Journal of Molecular Evolution. v. 74, p. 113-126, 2012. Qualis: A3
96.	Wattam, A. R. ; INZANA, T. J. ; Williams, K. P. ; Mane, S. P. ; Shukla, M. ; Almeida, N. F. ; Dickerman, A. W. ; MASON, S. ; MORIYON, I. ; O'CALLAGHAN, D. ; WHATMORE, A. M. ; Sobral, B. W. ; Tiller, R. V. ; Hoffmaster, A. R. ; Frace, M. A. ; DE CASTRO, C. ; MOLINARO, A. ; Boyle, S. M. ; De, B. K. ; SETUBAL, J. C.. Comparative Genomics of Early-Diverging Brucella Strains Reveals a Novel Lipopolysaccharide Biosynthesis Pathway. MBIO. v. 3, p. e00246-12-e00246-12, 2012. Qualis: A1
97.	WILSON, M. L. ; CAI, Y. ; HANLON, R. ; TAYLOR, S. ; CHEVREUX, B. ; SETUBAL, J. C. ; Tyler, B. M. ; PECCOUD, J.. Sequence verification of synthetic DNA by assembly of sequencing reads. Nucleic Acids Research (Online). v. 41, p. e25-e25, 2012. Qualis: A1
98.	ZHANG, DAPENG ; De Souza, Robson F ; Anantharaman, Vivek ; Iyer, Lakshminarayan M ; Aravind, L. Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics. BIOL DIRECT. v. 7, p. 18, 2012. Qualis: Não identificado (BIOL DIRECT)
99.	ZHANG, YONG E. ; LANDBACK, PATRICK ; VIBRANOVSKI, MARIA ; LONG, MANYUAN. New genes expressed in human brains: Implications for annotating evolving genomes. BioEssays (Cambridge). v. 34, p. 982-991, 2012. Qualis: A1
100.	ZPEVAK, FRANCISCO ANTONIO ; PEREZ, SÔNIA CRISTINA JULIANO GÜALTIERI DE ; BUCKERIDGE, MARCOS SILVEIRA. Isothermal seed germination of Adenanthera pavonina. Brazilian Journal of Botany. v. 35, p. 401-408, 2012. Qualis: B1

2011

1.	Alves, João M. P.; Voegtly, Logan ; Matveyev, Andrey V. ; Lara, Ana M. ; da Silva, Flávia Maia ; Serrano, Myrna G. ; Buck, Gregory A. ; Teixeira, Marta M. G. ; Camargo, Erney P.. Identification and Phylogenetic Analysis of Heme Synthesis Genes in Trypanosomatids and Their Bacterial Endosymbionts. Plos One. v. 6, p. e23518, 2011. Qualis: A1
2.	Amorim, Henrique V. ; Lopes, Mário Lucio ; Castro Oliveira, Juliana Velasco ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S. ; Goldman, Gustavo Henrique. Scientific challenges of bioethanol production in Brazil. Applied Microbiology and Biotechnology. v. 91, p. 1267-1275, 2011. Qualis: A2
3.	Amui, Saulo França ; Puga, Renato David ; Martins Soares, Andreimar ; Giuliatti, Silvana. Plant-antivenom: Database of anti-venom medicinal plants. Electronic Journal of Biotechnology. v. 14, p. 1-9, 2011. Qualis: A4
4.	Anghinah, R. ; Kanda, Paulo Afonso Medeiros ; Lopes, Helder Frederico ; Basile, Luis Fernando Hindi ; Machado, Sérgio ; Ribeiro, Pedro ; Velasques, Bruna ; Sameshima, K. ; Takahashi, D. Y. ; Pinto, Lécio Figueira ; Caramelli, P. ; Caramelli, Paulo. Alzheimer's disease qEEG: spectral analysis versus coherence. which is the best measurement?. Arquivos de Neuro-Psiquiatria (Impresso). v. 69, p. 871-874, 2011. Qualis: B2
5.	Araujo-Montoya, B.O. ; Rofatto, H.K. ; Tararam, C.A. ; Farias, L.P. ; Oliveira, K.C. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Wilson, R.A. ; Leite, L.C.C.. Schistosoma mansoni: Molecular characterization of Alkaline Phosphatase and expression patterns across life cycle stages. Experimental Parasitology,. p. 284-291, 2011. Qualis: A4 (EXPERIMENTAL PARASITOLOGY)
6.	Araújo, Luciano V ; Malkowski, Simon ; Braghetto, Kelly R ; Passos-Bueno, Maria R ; Zatz, Mayana ; Pu, Calton ; FERREIRA, JOÃO E. A rigorous approach to facilitate and guarantee the correctness of the genetic testing management in human genome information systems. BMC Genomics. v. 12, p. S13-8, 2011. Qualis: A2
7.	Bando, Silvia Y. ; Alegro, Maryana C. ; Amaro, Edson ; Silva, Alexandre V. ; Castro, Luiz H. M. ; Wen, Hung-Tzu ; Lima, Leandro de A. ; Brentani, Helena ; Brentani, H ; Moreira-Filho, Carlos Alberto. Hippocampal CA3 Transcriptome Signature Correlates with Initial Precipitating Injury in Refractory Mesial Temporal Lobe Epilepsy. Plos One. v. 6, p. e26268, 2011. Qualis: A1
8.	Begnami, Maria D. ; Fregnani, José Humberto T G ; Brentani, Helena ; Torres, Cesar ; Costa, Wilson Luiz ; Montagnini, Andre ; Nonogaki, Suely ; Soares, Fernando A. IDENTIFICATION OF PROTEIN EXPRESSION SIGNATURES IN GASTRIC CARCINOMAS USING CLUSTERING ANALYSIS. Journal of Gastroenterology and Hepatology. v. 27, p. 378-384, 2011. Qualis: A2
9.	Boes, Katie M. ; Goncarovs, Kristina O. ; Thompson, Craig A. ; Halik, Lindsay A. ; Santos, Andrea P. ; Guimaraes, Ana M. S. ; Feutz, Marybeth Miskovic ; Holman, Patricia J. ; Vemulapalli, Ramesh ; Messick, Joanne B.. Identification of a Mycoplasma ovis-like organism in a herd of farmed white-tailed deer (Odocoileus virginianus) in rural Indiana. Veterinary Clinical Pathology. v. 40, p. n/a-n/a, 2011. Qualis: A3
10.	Bogdanove, A. J. ; Koebnik, R. ; Lu, H. ; Furutani, A. ; Angiuoli, S. V. ; Patil, P. B. ; Van Sluys, M.-A. ; Ryan, R. P. ; Meyer, D. F. ; Han, S.-W. ; Aparna, G. ; Rajaram, M. ; Delcher, A. L. ; Phillippy, A. M. ; Puiu, D. ; Schatz, M. C. ; Shumway, M. ; Sommer, D. D. ; Trapnell, C. ; Benahmed, F.. Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.. Journal of Bacteriology (Print). v. 193, p. 5450-5464, 2011. Qualis: A3
11.	Bousquet, Jean ; Anto, Josep M ; Sterk, Peter J ; Adcock, Ian M ; Chung, Kian ; Roca, Josep ; Agusti, Alvar ; Brightling, Chris ; Cambon-Thomsen, Anne ; Cesario, Alfredo ; Abdelhak, Sonia ; Antonarakis, Stylianos E ; Avignon, Antoine ; Ballabio, Andrea ; Baraldi, Eugenio ; Baranov, Alexander ; Bieber, Thomas ; Bockaert, Joël ; Brahmachari, Samir ; Verjovski-Almeida, S.. Systems medicine and integrated care to combat chronic noncommunicable diseases. Genome Medicine. v. 3, p. 43, 2011. Qualis: A1
12.	BRENTANI, H. ; CABALLERO, O. ; CAMARGO, A. ; DASILVA, A. ; DASILVA, W. ; DIASNETO, E ; 11_other_authors ; RIGGINS, G. ; SIMPSON, A. J. ; SOUZA, S. ; STEVENSON, B. ; STRAUSBERG, R. ; TAJARA, E ; Verjovski-Almeida, S. ; AND.HCGP.CGAP.ANNOTATION.CONSORTIUM,. The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags. Proceedings of the National Academy of Sciences of the United States of America. v. 100, p. 13418-13423, 2011. Qualis: A1
13.	Brentani, Helena; Nakano, Eduardo Y ; Martins, Camila B ; Izbicki, Rafael ; Pereira, Carlos Alberto. Disequilibrium Coefficient: A Bayesian Perspective. Statistical Applications in Genetics and Molecular Biology. v. 10, p. art.22, 2011. Qualis: B1
14.	Cai, Rongman ; Lewis, James ; Yan, Shuangchun ; Liu, Haijie ; Clarke, Christopher R. ; Campanile, Francesco ; Almeida, Nalvo F. ; Studholme, David J. ; Lindeberg, Magdalen ; Schneider, David ; Zaccardelli, Massimo ; Setubal, Joao C. ; Morales-Lizcano, Nadia P. ; Bernal, Adriana ; Coaker, Gitta ; Baker, Christy ; Bender, Carol L. ; Leman, Scotland ; Vinatzer, Boris A.. The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity. PLoS Pathogens. v. 7, p. e1002130, 2011. Qualis: A1
15.	Cardoso-Cruz, H. ; Sameshima, K. ; Lima, D. ; Galhardo, V.. Dynamics of circadian thalamocortical flow of information during a peripheral neuropathic pain condition. Frontiers in Integrative Neuroscience. v. 5, p. 1-19, 2011. Qualis: A2
16.	Carraro, Dirce Maria ; Ferreira, Elisa Napolitano ; Molina, Gustavo de Campos ; Puga, Renato David ; Abrantes, Eduardo Fernandes ; Trapé, Adriana Priscila ; Ekhardt, Bedrich L. ; Nunes, Diana Noronha ; Brentani, Maria Mitzi ; Arap, Wadih ; Pasqualini, Renata ; Brentani, Helena ; Dias-Neto, Emmanuel ; Brentani, Ricardo Renzo. Poly (A)+ Transcriptome Assessment of ERBB2-Induced Alterations in Breast Cell Lines. Plos One. v. 6, p. e21022, 2011. Qualis: A1
17.	Carvalho, A. C. M. ; Bevilacqua, M. C. ; Sameshima, K. ; Costa Filho, O. A.. Auditory neuropathy/auditory dyssynchrony in children with cochlear implants. Brazilian Journal of Otorhinolaryngology (Impresso). v. 77, p. 481-487, 2011. Qualis: B1
18.	CHEN, MING ; ZOU, MING ; FU, BEIDE ; LI, XIN ; VIBRANOVSKI, MARIA D. ; GAN, XIAONI ; WANG, DENGQIANG ; WANG, WEN ; LONG, MANYUAN ; HE, SHUNPING. Evolutionary Patterns of RNA-Based Duplication in Non-Mammalian Chordates. Plos One. v. 6, p. e21466, 2011. Qualis: A1
19.	CHEN, Z. ; ZHANG, Y. ; VIBRANOVSKI, M. D. ; LUO, J. ; GAO, G. ; LONG, M.. Deficiency of X-Linked Inverted Duplicates with Male-Biased Expression and the Underlying Evolutionary Mechanisms in the Drosophila Genome. Molecular Biology and Evolution. v. 28, p. 2823-2832, 2011. Qualis: A1
20.	COLLEN, J. ; COLLEN, P. N. ; REIS, Marcelo da Silva ; PEDERSEN, M. ; SETUBAL, J. C. ; Varani, A. ; Colepicolo, P. ; OLIVEIRA, Mariana Cabral de. Analysis of expressed sequence tags from the agarophyte Gracilaria tenuistipitata (Rhodophyta). Journal of Applied Phycology. v. 24, p. 641-647, 2011. Qualis: A2
21.	Contini V ; BERTUZZI, G. P. ; Polina, Evelise R ; HÜNEMEIER, T. ; Hendler, Elisa M ; Hutz, M. ; Bau, CD. A haplotype analysis is consistent with the role of functional HTR1B variants in alcohol dependence. Drug and Alcohol Dependence. v. 00, p. 00000-00000, 2011. Qualis: A1
22.	Dal-Bianco, Maximiller ; Carneiro, Monalisa Sampaio ; Hotta, Carlos Takeshi ; Chapola, Roberto Giacomini ; Hoffmann, Hermann Paulo ; Garcia, Antonio Augusto Franco ; SOUZA, GLAUCIA MENDES. Sugarcane improvement: how far can we go?. Current Opinion in Biotechnology. v. x, p. xx, 2011. Qualis: A1
23.	De Almeida-Neto, Cesar ; Liu, Jing ; Wright, David J. ; Mendrone-Junior, Alfredo ; Takecian, Pedro L. ; Sun, Yu ; Ferreira, Joao Eduardo ; de Alencar Fischer Chamone, Dalton ; Busch, Michael P. ; Sabino, Ester Cerdeira ; FOR THE NHLBI RETROVIRUS EPIDEMIOLOGY DONOR STUDY-II (REDS-II), INTERNATIONAL COMPONENT. Demographic characteristics and prevalence of serologic markers among blood donors who use confidential unit exclusion (CUE) in São Paulo, Brazil: implications for modification of CUE polices in Brazil. Transfusion (Arlington, Va.). v. 51, p. 191-197, 2011. Qualis: A3
24.	Duraiswamy, J. ; Ibegbu, C. C. ; Masopust, D. ; Miller, J. D. ; Araki, K. ; Doho, G. H. ; Tata, P. ; Gupta, S. ; Zilliox, M. J. ; NAKAYA, H. I. ; Pulendran, B. ; Haining, W. N. ; Freeman, G. J. ; Ahmed, R.. Phenotype, Function, and Gene Expression Profiles of Programmed Death-1hi CD8 T Cells in Healthy Human Adults. The Journal of Immunology (1950). v. 186, p. 4200-4212, 2011. Qualis: A1
25.	Farias, Leonardo P. ; Tararam, Cibele A. ; Miyasato, Patricia A. ; Nishiyama, Milton Y. ; Oliveira, Katia C. ; KAWANO, Toshie ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Leite, Luciana Cezar de Cerqueira. Screening the Schistosoma mansoni transcriptome for genes differentially expressed in the schistosomulum stage in search for vaccine candidates. Parasitology Research (1987. Print). v. 108, p. 123-135, 2011. Qualis: Não identificado (PRINT))
26.	Freire, M. A.M. ; Morya, E. ; Fabre, J. ; Santos, J. R. ; Guimaraes, J. S. ; Lemos, A.M.N. ; Sameshima, K. ; Pereira, A. ; Ribeiro, S. ; Nicolelis, M. A. L.. Comprehensive Analysis of Tissue Preservation and Recording Quality from Chronic Multielectrode Implants. Plos One. v. 6, p. e27554, 2011. Qualis: A1
27.	FUJITA, A; Sato, J. R. ; Demasi, Marcos Almeida ; Yamaguchi, R. ; Shimamura, T. ; FERREIRA, Carlos Eduardo ; Sogayar, Mari C ; Miyano, S.. Inferring contagion in regulatory networks. IEEE/ACM Transactions on Computational Biology and Bioinformatics (Print). v. 8, p. 570-576, 2011. Qualis: A1
28.	Garsmeur, Olivier ; Charron, Carine ; Bocs, Stéphanie ; Jouffe, Vincent ; Samain, Sylvie ; Couloux, Arnaud ; Droc, Gaëtan ; Zini, Cyrille ; Glaszmann, Jean-Christophe ; Van Sluys, Marie-Anne ; D¿Hont, Angélique. High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane. New Phytologist (Print). v. 189, p. 629-642, 2011. Qualis: A1
29.	Gazarini, Marcos L. ; Beraldo, Flávio H. ; Almeida, Fabiana M. ; Bootman, Martin ; da Silva, Aline M. ; Garcia, Célia R. S.. Melatonin triggers PKA activation in the rodent malaria parasite Plasmodium chabaudi. Journal of Pineal Research. v. 50, p. 64-70, 2011. Qualis: A1
30.	Genick, U. K. ; Kutalik, Z. ; Ledda, M. ; Destito, M. C. S. ; Cirillo, C. A. ; Godinot, N. ; Martin, N. ; Morya, E. ; Sameshima, K. ; Bergmann, S. ; Le Coutre, J.. Sensitivity of Genome-Wide-Association Signals to Phenotyping Strategy: The PROP-TAS2R38 Taste Association as a Benchmark. Plos One. v. 6, p. e27745, 2011. Qualis: A1
31.	Giolo, S.R. ; SOLER, J. M. P. ; Batista, M.J. ; ALMEIDA, M. A. A. ; Pereira, A.C.. Evidence of SNP effect on the risk of rheumatoid arthritis: effects of covariate adjustment upon association results. Revista Brasileira de Biometria. v. 29, p. 47-59, 2011.Qualis: C
32.	GIOLO, SUELY R ; SOLER, JÚLIA M P ; GREENWAY, STEVEN C ; ALMEIDA, MARCIO A A ; DE ANDRADE, MARIZA ; SEIDMAN, J G ; SEIDMAN, CHRISTINE E ; KRIEGER, JOSÉ E ; PEREIRA, ALEXANDRE C. Brazilian urban population genetic structure reveals a high degree of admixture. European Journal of Human Genetics. v. 20, p. 111-116, 2011. Qualis: A3
33.	Grazziotin, Ana Laura ; Santos, Andrea Pires ; Guimaraes, Ana Marcia Sa ; Mohamed, Ahmed ; Cubas, Zalmir Silvino ; Oliveira, Marcos Jose de ; Santos, Leonilda Correia dos ; de Moraes, Wanderlei ; Vieira, Rafael Felipe da Costa ; Donatti, Lucelia ; Filho, Ivan Roque de Barros ; Biondo, Alexander Welker ; Messick, Joanne Belle. Mycoplasma ovis in captive cervids: prevalence, molecular characterization and phylogeny. Veterinary Microbiology (Amsterdam. Print),. p. 1, 2011. Qualis: Não identificado (PRINT),)
34.	GRAZZIOTTIN, A. L. ; DUARTE, J. M. B. ; SZABO, M. P. J. ; Santos, A.P. ; GUIMARAES, A. M. S. ; Mohamed, Ahmed ; Vieira, Rafael F.C. ; BARROS FILHO, I. R. ; BIONDO, A. W. ; Messick, J.B.. Prevalence and molecular characterization of Mycoplasma ovis in selected free-ranging Brazilian deer populations. Journal of Wildlife Diseases. v. 47, p. 1005-1011, 2011.Qualis: A3
35.	Guimaraes, A.M.S.; Vieira, R.F.C. ; Poletto, R. ; VEMULAPALLI, R. ; Santos, A.P. ; de Moraes, W. ; Cubas, Z.S. ; Santos, L.C. ; Marchant-Forde, J.N. ; TIMENETSKY, J. ; Biondo, A.W. ; Messick, J.B.. A quantitative TaqMan PCR assay for the detection of Mycoplasma suis. Journal of Applied Microbiology (Print),. p. no-no, 2011. Qualis: A3 (JOURNAL OF APPLIED MICROBIOLOGY)
36.	Guimaraes, Ana M. S.; Santos, Andrea P. ; SanMiguel, Phillip ; Walter, Thomas ; Timenetsky, Jorge ; Messick, Joanne B.. Complete Genome Sequence of Mycoplasma suis and Insights into Its Biology and Adaption to an Erythrocyte Niche. Plos One. v. 6, p. e19574, 2011. Qualis: A1
37.	Hamilton, T. L. ; LUDWIG, M. ; DIXON, R. ; Boyd, E. S. ; dos SANTOS, P. C. ; SETUBAL, J. C. ; BRYANT, D. A. ; Dean, D. R. ; PETERS, J. W.. Transcriptional Profiling of Nitrogen Fixation in Azotobacter vinelandii. Journal of Bacteriology (Print). v. 193, p. 4477-4486, 2011. Qualis: A3
38.	Higa, Carlos HA ; Louzada, Vitor HP ; Andrade, Tales P ; Hashimoto, Ronaldo F. Constraint-based analysis of gene interactions using restricted boolean networks and time-series data. BMC Proceedings. v. 5, p. S5, 2011. Qualis: Não identificado (BMC PROCEEDINGS)
39.	HORIMOTO, ANDREA R V R ; GIOLO, SUELY R ; OLIVEIRA, CAMILA M ; ALVIM, RAFAEL O ; SOLER, JULIA P ; DE ANDRADE, MARIZA ; KRIEGER, JOSE E ; PEREIRA, ALEXANDRE C. Heritability of physical activity traits in Brazilian families: the Baependi Heart Study. BMC Medical Genetics (Online). v. 12, p. 155, 2011. Qualis: A4
40.	JACINTO, DANIELE S. ; MUNIZ, HELOISA DOS SANTOS ; Venancio, Thiago M. ; Wilson, R. Alan ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; DEMARCO, Ricardo. Curupira-1 and Curupira-2, two novel Mutator-like DNA transposons from the genomes of human parasites Schistosoma mansoni and Schistosoma japonicum. Parasitology (London. Print). v. 138, p. 1124-1133, 2011. Qualis: Não identificado (PRINT))
41.	Jalan, N. ; Aritua, V. ; Kumar, D. ; Yu, F. ; Jones, J. B. ; Graham, J. H. ; SETUBAL, J. C. ; Wang, N.. Comparative Genomic Analysis of Xanthomonas axonopodis pv. citrumelo F1, Which Causes Citrus Bacterial Spot Disease, and Related Strains Provides Insights into Virulence and Host Specificity. Journal of Bacteriology (Print). v. 193, p. 6342-6357, 2011. Qualis: A3
42.	Kasparek, Tomas ; Thomaz, Carlos Eduardo ; Sato, Joao Ricardo ; Schwarz, Daniel ; Janousova, Eva ; Marecek, Radek ; Prikryl, Radovan ; Vanicek, Jiri ; Fujita, Andre ; Ceskova, Eva. Maximum-uncertainty linear discrimination analysis of first-episode schizophrenia subjects. Psychiatry Research. Neuroimaging (Print). v. 191, p. 174-181, 2011. Qualis: Não identificado (NEUROIMAGING)
43.	Kasturi, Sudhir Pai ; Skountzou, Ioanna ; Albrecht, Randy A. ; Koutsonanos, Dimitrios ; Hua, Tang ; Nakaya, Helder I. ; Ravindran, Rajesh ; Stewart, Shelley ; Alam, Munir ; Kwissa, Marcin ; Villinger, Francois ; Murthy, Niren ; Steel, John ; Jacob, Joshy ; Hogan, Robert J. ; García-Sastre, Adolfo ; Compans, Richard ; Pulendran, Bali. Programming the magnitude and persistence of antibody responses with innate immunity. Nature (London). v. 470, p. 543-547, 2011. Qualis: A1
44.	Lima, F. A. ; Moreira-Filho, C. A. ; Ramos, P. L. ; BRENTANI, H. ; Lima, L. d. A. ; Arrais, M. ; Bento-de-Souza, L. C. ; Bento-de-Souza, L. ; Duarte, M. I. ; Coutinho, A. ; Carneiro-Sampaio, M.. Decreased AIRE Expression and Global Thymic Hypofunction in Down Syndrome. The Journal of Immunology (1950). v. 187, p. 3422-3430, 2011. Qualis: A1
45.	Manque, P. A. ; Fernando A. Tenjo ; Ute Woehlbier ; Ana M. Lara ; SERRANO, M. G. ; XU, P. ; Alves, Joao M ; Ronald Smeltz ; Daniel Conrad ; BUCK, G. A.. Identification and immunological characterization of three potential vaccinogens against Cryptosporidium. Clinical and Vaccine Immunology. v. 18, p. 1796-1802, 2011. Qualis: A3
46.	Manque, P. A. ; Probst, C. ; PEREIRA, M. C. S. ; RAMPAZZO, R. C. P. ; OZAKI, L. S. ; PAVONI, D. P. ; Silva Neto, D. T. ; CARVALHO, M. R. ; XU, P. ; SERRANO, M. G. ; ALVES, J. M. P. ; Meirelles, M. d. N. S. L. ; GOLDENBERG, S. ; KRIEGER, M. A. ; BUCK, G. A.. Trypanosoma cruzi Infection Induces a Global Host Cell Response in Cardiomyocytes. Infection and Immunity (Print). v. 79, p. 1855-1862, 2011. Qualis: A2
47.	Marques, Fernanda ; Sousa, João C ; Coppola, Giovanni ; Gao, Fuying ; Puga, Renato ; Brentani, Helena ; Geschwind, Daniel H ; Sousa, Nuno ; Correia-Neves, Margarida ; Palha, Joana A. Transcriptome signature of the adult mouse choroid plexus. Fluids and Barriers of the CNS. v. 8, p. 10, 2011. Qualis: A3
48.	Marques, L.M. ; BUZINHANI, M. ; Guimaraes, A.M.S. ; Marques, R.C.P. ; Farias, S.T. ; Neto, R.L. ; YAMAGUTI, M. ; Oliveira, R.C. ; TIMENETSKY, J.. Intraspecific sequence variation in 16S rRNA gene of Ureaplasma diversum isolates. Veterinary Microbiology (Amsterdam. Print),. p. 2, 2011. Qualis: Não identificado (PRINT),)
49.	Maschietto, M ; Trapé, A P ; Piccoli, F S ; Ricca, T I ; Dias, A A M ; Coudry, R A ; Galante, P A ; Torres, C ; Fahhan, L ; Lourenço, S ; Grundy, P E ; de Camargo, B ; de Souza, S ; Neves, E J ; Soares, F A ; Brentani, H ; Carraro, D M. Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset. CELL DEATH DIS. v. 2, p. e224, 2011. Qualis: Não identificado (CELL DEATH DIS)
50.	Maschietto, Mariana ; Piccoli, Fabio S. ; Costa, Cecilia M.L. ; Camargo, Luiz P. ; Neves, Jose I. ; Grundy, Paul E. ; Brentani, Helena ; Soares, Fernando A. ; Camargo, Beatriz de ; Carraro, Dirce M.. Gene expression analysis of blastemal component reveals genes associated with relapse mechanism in Wilms tumour. European Journal of Cancer. v. 47, p. 2715-2722, 2011. Qualis: A1
51.	Mayworm, M.A.S., ; BUCKERIDGE, M. S. ; Marquez, U.M.L. ; Salatino A. Nutritional reserves of Vochysiaceae seeds: chemical diversity and potential economic uses. Anais da Academia Brasileira de Ciências (Impresso). v. 83, p. 523-531, 2011. Qualis: A2
52.	MESSICK, J. B. ; Santos, A. P. ; GUIMARAES, A. M. S.. Complete Genome Sequences of Two Hemotropic Mycoplasmas, Mycoplasma haemofelis Strain Ohio2 and Mycoplasma suis Strain Illinois. Journal of Bacteriology (Print). v. 193, p. 2068-2069, 2011. Qualis: A3
53.	Nagasaki, M. ; SAITO, A. ; FUJITA, A. ; Tremmel, G. ; Ueno, K. ; IKEDA, E. ; Jeong, E. ; Miyano, S.. Systems biology model repository for macrophage pathway simulation. Bioinformatics (Oxford. Print). v. 27, p. 1591-1593, 2011. Qualis: Não identificado (PRINT))
54.	Nakaya, Helder I.; Li, Shuzhao ; Pulendran, Bali. Systems vaccinology: learning to compute the behavior of vaccine induced immunity. WIRES SYST BIOL MED. v. 19, p. n/a-n/a, 2011. Qualis: Não identificado (WIRES SYST BIOL MED)
55.	Nakaya, Helder I; Wrammert, Jens ; Lee, Eva K ; Racioppi, Luigi ; Marie-Kunze, Stephanie ; Haining, W Nicholas ; Means, Anthony R ; Kasturi, Sudhir P ; Khan, Nooruddin ; Li, Gui-Mei ; McCausland, Megan ; Kanchan, Vibhu ; Kokko, Kenneth E ; Li, Shuzhao ; Elbein, Rivka ; Mehta, Aneesh K ; Aderem, Alan ; Subbarao, Kanta ; Ahmed, Rafi ; Pulendran, Bali. Systems biology of vaccination for seasonal influenza in humans. Nature Immunology (Print). v. 12, p. 786-795, 2011. Qualis: A1
56.	Oliveira, K. C. ; Nery, F. G. ; Ferreti, R. E. L. ; Lima, M. C. ; Cappi, C. ; MACHADO-LIMA, A. ; Polichiso, L. ; Carreira, L. L. ; Ávila, C. ; Alho, A. T. D. L. ; BRENTANI, H. P. ; Miguel, E. C. ; Heinsen, H. ; Jacob-Filho, W. ; Pasqualucci, C. A. ; Lafer, B. ; Grinberg, L. T.. Brazilian psychiatric brain bank: a new contribution tool to network studies. Cell and Tissue Banking. v. 13, p. 315-326, 2011. Qualis: A4
57.	Oliveira, Katia C. ; Carvalho, Mariana L. P. ; Maracaja-Coutinho, V. ; KITAJIMA, J. P. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Non-coding RNAs in schistosomes: an unexplored world. Anais da Academia Brasileira de Ciências (Impresso). v. 83, p. 673-694, 2011. Qualis: A2
58.	PAULSEN, B. D. S. ; MACIEL, R. M. ; GALINA, A. ; SILVEIRA, M. S. ; SOUZA, C. S. ; DRUMMOND, H. ; POZZATTO, E. N. ; SILVA JUNIOR, H. ; CHICAYBAM, L. ; MASSUDA, R. ; SETTI-PERDIGAO, P. ; BONAMINO, M. ; ABREU, P. S. B. ; CASTRO, N. G. ; BRENTANI, H. ; REHEN, S. K.. Altered oxygen metabolism associated to neurogenesis of induced pluripotent stem cells derived from a schizophrenic patient. Cell Transplantation. v. XXX, p. XXX-XXX, 2011. Qualis: A2
59.	Potnis, Neha ; Krasileva, Ksenia ; Chow, Virginia ; Almeida, Nalvo F ; Patil, Prabhu B ; Ryan, Robert P ; Sharlach, Molly ; Behlau, Franklin ; Dow, J Max ; Momol, MT ; White, Frank F ; Preston, James F ; Vinatzer, Boris A ; Koebnik, Ralf ; Setubal, João C ; Norman, David J ; Staskawicz, Brian J ; Jones, Jeffrey B. Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics. v. 12, p. 146, 2011. Qualis: A2
60.	Ryan, Robert P. ; Vorhölter, Frank-Jörg ; Potnis, Neha ; Jones, Jeffrey B. ; Van Sluys, Marie-Anne ; Bogdanove, Adam J. ; Dow, J. Maxwell. Pathogenomics of Xanthomonas: understanding bacterium¿plant interactions. Nature Review, Microbiology (Print). v. 9, p. 344-355, 2011. Qualis: A1
61.	Santos, Andrea P ; Guimaraes, Ana MS ; do Nascimento, Naila C ; SanMiguel, Phillip J ; Martin, Samuel W ; Messick, Joanne B. Genome of Mycoplasma haemofelis, unraveling its strategies for survival and persistence. Veterinary Research. v. 42, p. 102, 2011. Qualis: A1
62.	Santos, Rosângela Portilho Costa ; Benvenuti, Ticiana Thomazine ; Honda, Suzana Terumi ; Valle, Paulo Roberto ; Katayama, Maria Lucia Hirata ; Brentani, Helena Paula ; Carraro, Dirce Maria ; Rozenchan, Patrí ; Brentani, Maria Mitzi ; Lyra, Eduardo Carneiro ; Torres, César Henrique ; Salzgeber, Marcia Batista ; Kaiano, Jane Haruko Lima ; Góes, João Carlos Sampaio ; Folgueira, Maria Aparecida Azevedo Koike. Influence of the interaction between nodal fibroblast and breast cancer cells on gene expression. Tumor Biology. v. 32, p. 145-157, 2011. Qualis: A4
63.	Schlesinger, D ; Grinberg, L T ; Alba, J G ; Naslavsky, M S ; Licinio, L ; Farfel, J M ; Suemoto, C K ; de Lucena Ferretti, R E ; Leite, R E P ; de Andrade, M P ; dos Santos, A C F ; Brentani, H ; Pasqualucci, C A ; Nitrini, R ; Jacob-Filho, W ; Zatz, M. African ancestry protects against Alzheimer's disease-related neuropathology. Molecular Psychiatry. v. 18, p. 79-85, 2011. Qualis: A1
64.	Setta, Nathalia ; Sluys, Marie-Anne ; Capy, Pierre ; Carareto, Claudia Marcia Aparecida. Copia Retrotransposon in the Zaprionus Genus: Another Case of Transposable Element Sharing with the Drosophila melanogaster Subgroup. Journal of Molecular Evolution. v. 72, p. 326-338, 2011. Qualis: A3
65.	Silva, Giovanna B. ; Ionashiro, Mari ; Carrara, Thalita B. ; Crivellari, Augusto C. ; Tine, M. A. S. ; Prado, Jefferson ; Carpita, Nicholas C. ; BUCKERIDGE, MARCOS S.. Cell wall polysaccharides from fern leaves: Evidence for a mannan-rich Type III cell wall in Adiantum raddianum. Phytochemistry. v. 72, p. 2352-2360, 2011. Qualis: A2
66.	SOUZA, GLAUCIA MENDES ; BERGES, HELENE ; BOCS, STEPHANIE ; CASU, ROSANNE ; D'HONT, ANGELIQUE ; FERREIRA, JOÃO EDUARDO ; HENRY, ROBERT ; Ming, Ray ; POTIER, BERNARD ; Sluys, Marie-Anne ; VINCENTZ, Michel ; PATERSON, ANDREW H.. The Sugarcane Genome Challenge: Strategies for Sequencing a Highly Complex Genome. Tropical Plant Biology (Online). v. 4, p. 145-156, 2011. Qualis: A3
67.	Staquicini, F. I. ; Cardo-Vila, M. ; Kolonin, M. G. ; Trepel, M. ; Edwards, J. K. ; Nunes, D. N. ; Sergeeva, A. ; Efstathiou, E. ; Sun, J. ; Almeida, N. F. ; Tu, S.-M. ; Botz, G. H. ; Wallace, M. J. ; O'Connell, D. J. ; Krajewski, S. ; Gershenwald, J. E. ; Molldrem, J. J. ; Flamm, A. L. ; Koivunen, E. ; SETUBAL, J. C.. Vascular ligand-receptor mapping by direct combinatorial selection in cancer patients. Proceedings of the National Academy of Sciences of the United States of America. v. 108, p. 1-6, 2011. Qualis: A1
68.	Tahira, Ana C ; Kubrusly, Márcia S ; Faria, Michele F ; Dazzani, Bianca ; Fonseca, Rogério S ; Maracaja-Coutinho, Vinicius ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Machado, Marcel CC ; REIS, Eduardo M. Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer. Molecular Cancer. v. 10, p. 141, 2011. Qualis: A1
69.	Trape, A. P. ; KATAYAMA, M. L. H. ; ROELA, R. A. ; BRENTANI, H. ; Ravacci, G. R. ; Lima, L. A. ; BRENTANI, M. M.. Gene expression profile in response to doxorubicin-rapamycin combined treatment of HER-2 overexpressing human mammary epithelial cell lines. Molecular Cancer Therapeutics. v. 11, p. 464-474, 2011. Qualis: A1
70.	VALENZUELA, Juan Carlos B. ; FUJITA, A ; HALCSIK, E. ; GRANJEIRO, J. M. ; SOGAYAR, Mari Cleide. Unveiling novel genes upregulated by both rhBMP2 and rhBMP7 during early osteoblastic transdifferentiation of C2C12 cells. BMC Research Notes. v. 4, p. 370, 2011. Qualis: B1
71.	Verjovski-Almeida, S.; Verjovski-Almeida, S. ; DEMARCO, Ricardo. Gene structure and splicing in schistosomes. Journal of Proteomics. v. 74, p. 1515-1518, 2011. Qualis: A1
72.	VIEIRA, R. F. C. ; BIONDO, A. W. ; GUIMARAES, A. M. S. ; Santos, A.P. ; SANTOS, R. P. ; DUTRA, L. H. ; DINIZ, P. P. ; de Morais, H. A. ; MESSICK, J. B. ; LABRUNA, M. B. ; VIDOTTO, O.. Ehrlichiosis in Brazil. Revista Brasileira de Parasitologia Veterinária (Impresso). v. 20, p. 1-12, 2011.Qualis: A2
73.	VIEIRA, R. F. C. ; Molento, M.B. ; GUIMARAES, A. M. S. ; Santos, A.P. ; Bonat, Marcelo ; JAVOROUSKI, M. L. ; POPP, L. ; SANTOS, L. C. ; MORAES, W. ; CUBAS, Z. S. ; VIEIRA, T. S. W. J. ; VIDOTTO, O. ; BARROS FILHO, I. R. ; BIONDO, A. W. ; MESSICK, J. B.. Use of a Mycoplasma suis-PCR protocol for screening a population of captive peccaries (Tayassu tajacu and Tayassu pecari). Revista Brasileira de Parasitologia Veterinária (Impresso). v. 20, p. 75-77, 2011.Qualis: A2
74.	Wibberg, Daniel ; Blom, Jochen ; Jaenicke, Sebastian ; Kollin, Florian ; Rupp, Oliver ; Scharf, Birgit ; Schneiker-Bekel, Susanne ; Sczcepanowski, Rafael ; Goesmann, Alexander ; Setubal, Joao Carlos ; Schmitt, Rüdiger ; Pühler, Alfred ; Schlüter, Andreas. Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. Journal of Biotechnology. v. 155, p. 50-62, 2011. Qualis: A3
75.	Yagura, Teiti ; Makita, Kazuo ; Yamamoto, Hiromasa ; Menck, Carlos F.M. ; Schuch, André P.. Biological Sensors for Solar Ultraviolet Radiation. Sensors (Basel). v. 11, p. 4277-4294, 2011. Qualis: A1
76.	YEPES, A. ; BUCKERIDGE, M. S.. Respuestas de las plantas ante los factores ambientales del cambio climático global. Revista IDEAS (Online). v. 14, p. 213-232, 2011.Qualis: C
77.	Zhang, Hongtao ; Setubal, Joao Carlos ; Zhan, Xiaobei ; Zheng, Zhiyong ; Yu, Lijun ; Wu, Jianrong ; Chen, Dingqiang. Component identification of electron transport chains in curdlan-producing Agrobacterium sp. ATCC 31749 and its genome-specific prediction using comparative genome and phylogenetic trees analysis. Journal of Industrial Microbiology & Biotechnology. v. 38, p. 667-677, 2011. Qualis: A3
78.	ZHANG, Y. E. ; VIBRANOVSKI, M. D. ; KRINSKY, B. H. ; LONG, M.. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Bioinformatics (Oxford. Print). v. 27, p. 1749-1753, 2011. Qualis: Não identificado (PRINT))
79.	ZHANG, YONG E. ; LANDBACK, PATRICK ; VIBRANOVSKI, MARIA D. ; LONG, MANYUAN. Accelerated Recruitment of New Brain Development Genes into the Human Genome. PLoS Biology (Online). v. 9, p. e1001179, 2011. Qualis: A1

2010

1.	Almeida, Nalvo F. ; Yan, Shuangchun ; Cai, Rongman ; Clarke, Christopher R. ; Morris, Cindy E. ; Schaad, Norman W. ; Schuenzel, Erin L. ; Lacy, George H. ; Sun, Xiaoan ; Jones, Jeffrey B. ; Castillo, Jose A. ; Bull, Carolee T. ; Leman, Scotland ; Guttman, David S. ; Setubal, João C. ; Vinatzer, Boris A.. PAMDB, A Multilocus Sequence Typing and Analysis Database and Website for Plant-Associated Microbes. Phytopathology. v. 100, p. 208-215, 2010. Qualis: A1
2.	Anantharaman, Vivek ; Abhiman, Saraswathi ; De Souza, Robson F. ; Aravind, L.. Comparative genomics uncovers novel structural and functional features of the heterotrimeric GTPase signaling system. Gene (Amsterdam). v. 475, p. 63-78, 2010. Qualis: A4
3.	Aravind, L ; De Souza, Robson F ; Iyer, Lakshminarayan M. Predicted class-I aminoacyl tRNA synthetase-like proteins in non-ribosomal peptide synthesis. Biology Direct. v. 5, p. 48, 2010. Qualis: Não identificado (BIOLOGY DIRECT)
4.	Arcuri, Silvia M. ; Amaro, Edson ; Bromme, Matthew R. ; Vieira, G. ; Sato, João R. ; Brammer, M. J. ; Williams, Steve S.C. ; Sameshima, K. ; Baccalá, Luiz ; Morris, Robin G.. FUNCTIONAL DISCONNECTIVITY AND FORMAL THOUGHT DISORDER IN SCHIZOPHRENIA: INTEGRATING CLINICAL, NEUROPSYCHOLOGICAL, NEUROIMAGING AND FUNCTIONAL CONNECTIVTY DATA. Schizophrenia Research (Print). v. 117, p. 232-233, 2010. Qualis: A1
5.	BALAJI, P. ; FENG, W. ; LIN, H. ; ARCHULETA, J. ; MATSUOKA, S. ; Warren, A. ; Setubal, J. ; Lusk, Ewing ; Thakur, R. ; Foster, I. ; Katz, D. S. ; Jha, S. ; Shinpaugh, K. ; Coghlan, S. ; Reed, D.. Global-scale distributed I/O with ParaMEDIC. Concurrency and Computation. v. 22, p. 2266-2281, 2010. Qualis: Não identificado (CONCURRENCY AND COMPUTATION)
6.	Baratti, Mariana O ; Moreira, Yuri B ; Traina, Fabiola ; Costa, Fernando F ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Olalla-Saad, Sara T. Identification of protein-coding and non-coding RNA expression profiles in CD34+ and in stromal cells in refractory anemia with ringed sideroblasts. BMC Medical Genomics. v. 3, p. 30, 2010. Qualis: A3
7.	Bare, J.C. ; KOIDE, T. ; Reiss, D.J. ; Tenembaum, D. ; Baliga, N.S.. Integration and visualization of systems biology data in context of the genome. BMC Bioinformatics. v. 11, p. 382, 2010. Qualis: A1
8.	BARROS FILHO, M.C. ; KATAYAMA, M.L.H. ; BRENTANI, H. ; ABREU, A.P.S. ; BARBOSA, E.M. ; OLIVEIRA, C.T. ; GÓES, J.C.S. ; BRENTANI, M.M. ; FOLGUEIRA, M.A.A.K.. Gene trio signatures as molecular markers to predict response to doxorubicin cyclophosphamide neoadjuvant chemotherapy in breast cancerpatients. Brazilian journal of medical and biological research. v. 43, p. 1225-1231, 2010. Qualis: A4
9.	BERRA, C. M. ; MENCK CF ; MARTINEZ, G. R. ; OLIVEIRA, C. S. ; Baptista MS ; MASCIO, P.. Plasmid DNA damage induced by singlet molecular oxygen released from the naphthalene endoperoxide DHPNO2 and photoactivated methylene blue.. Química Nova (Online). v. 33, p. 279-283, 2010.Qualis: A4
10.	Biase, Fernando Henrique ; Martelli, Lúcia ; Puga, Renato ; Giuliatti, Silvana ; Santos-Biase, Weruska Karyna Freitas ; Fonseca Merighe, Giovana Krempel ; Meirelles, Flavio Vieira. Messenger RNA expression of Pabpnl1 and Mbd3l2 genes in oocytes and cleavage embryos. Fertility and Sterility. v. 93, p. 2507-2512, 2010. Qualis: A1
11.	BOCCARDO, E. ; Manzini Baldi, C. V. ; CARVALHO, A. F. ; RABACHINI, T. ; Torres, C. ; BARRETA, L. A. ; BRENTANI, H. ; VILLA, L. L.. Expression of human papillomavirus type 16 E7 oncoprotein alters keratinocytes expression profile in response to tumor necrosis factor- . Carcinogenesis (New York. Print). v. 31, p. 521-531, 2010. Qualis: Não identificado (PRINT))
12.	BUCKERIDGE, M. S. Seed Cell Wall Storage Polysaccharides: models to understand cell wall biosynthesis and degradation. Plant Physiology (Bethesda),. p. 1-7, 2010. Qualis: A1 (PLANT PHYSIOLOGY)
13.	BUCKERIDGE, M. S.; GONCALVES, J. F. C. ; LIM, R.B.S. ; FERNANDES, A. V. ; Borges, E.E.L.B.. Physiological and biochemical characterization of the assai palm (Euterpe oleracea Mart.) during seed germination and seedling growth under aerobic and anaerobic conditions. Revista Árvore (Impresso). v. 34, p. 1045-4053, 2010. Qualis: B2
14.	CARDOSO, K. C. ; SILVA, M. J. ; COSTA, G. G. L. ; TORRES, T. T. ; DEL BEM, L. E. V. ; VIDAL, R. O. ; MENOSSI, M. ; HYSLOP, S.. A transcriptomic analysis of gene expression in the venom gland of the snake Bothrops alternatus (urutu). BMC Genomics. v. 11, p. 605, 2010. Qualis: A2
15.	CARNEIRO-PROIETTI, A. B. ; SABINO, E. C. ; Sampaio, Divaldo ; Proietti, Fernando A. ; GONCALVES, T. T. ; OLIVEIRA, C. D. L. ; FERREIRA, J. E. ; Liu, Jing ; Schreiber, George B. ; Murphy, Edward L. ; BUSCH, M. P.. Demographic profile of blood donors at three major Brazilian blood centers: results from the International REDS-II study, 2007 to 2008. TRANSFUSION (ONLINE). v. 50, p. 918-925, 2010. Qualis: A3
16.	Carvalho, Helotonio ; Garrido, Leandro M. ; Furlan, Renata L. A. ; Padilla, Gabriel ; Agnoletto, Mateus ; Guecheva, Temenouga ; Henriques, João A. P. ; Saffi, Jenifer ; Menck, Carlos Frederico Martins. DNA damage induced by the anthracycline cosmomycin D in DNA repair-deficient cells. Cancer Chemotherapy and Pharmacology. v. 65, p. 989-994, 2010. Qualis: A2
17.	CARVALHO, R.A. ; AZEREDO-ESPIN, A.M.L. ; TORRES, T.T.. Deep sequencing of New World screw-worm transcripts to discover genes involved in insecticide resistance. BMC GENOMICS. v. 11, p. 695, 2010. Qualis: A2
18.	Chudzinski-Tavassi, Ana Marisa ; De-Sá-Júnior, Paulo Luis ; Simons, Simone Michaela ; Maria, Durvanei Augusto ; de Souza Ventura, Janaina ; de Fátima Correia Batista, Isabel ; Faria, Fernanda ; Durães, Esther ; REIS, Eduardo Moraes ; REIS, EM ; Demasi, Marilene. A new tick Kunitz type inhibitor, Amblyomin-X, induces tumor cell death by modulating genes related to the cell cycle and targeting the ubiquitin-proteasome system. Toxicon (Oxford),. p. June 1, 2010. Qualis: Não identificado (TOXICON ,)
19.	Cordenunsi, Beatriz ; Saura-Calixto, Fulgêncio ; Diaz-Rubio, Maria Elena ; Zuleta, Angela ; Tiné, Marco Aurélio ; Buckeridge, Marcos Silveira ; BUCKERIDGE, M. S. ; Silva, Giovanna Bezerra da ; Carpio, Cecilia ; Giuntini, Eliana Bistriche ; Menezes, Elizabete Wenzel de ; Lajolo, Franco. Carbohydrate composition of ripe pineapple (cv. perola) and the glycemic response in humans. Ciência e Tecnologia de Alimentos (Impresso). v. 30, p. 282-288, 2010. Qualis: B1 (CIENCIA E TECNOLOGIA DE ALIMENTOS)
20.	Cutiño-Jiménez, Ania M. ; Martins-Pinheiro, Marinalva ; Lima, Wanessa C. ; Martín-Tornet, Alexander ; Morales, Osleidys G. ; Menck, Carlos F.M.. Evolutionary placement of Xanthomonadales based on conserved protein signature sequences. Molecular Phylogenetics and Evolution (Print). v. 54, p. 524-534, 2010. Qualis: A1
21.	da Silva Neto, Jose F ; Koide, Tie ; Gomes, Suely L ; Marques, Marilis V. Global gene expression under nitrogen starvation in Xylella fastidiosa: contribution of the sigma54 regulon. BMC Microbiology (Online). v. 10, p. 231, 2010. Qualis: A2
22.	DaMatta, Fábio M. ; Grandis, Adriana ; Arenque, Bruna C. ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S.. Impacts of climate changes on crop physiology and food quality. Food Research International. v. 43, p. 1814-1823, 2010. Qualis: A1
23.	de Souza, R. F.; Aravind, L.. UMA and MABP domains throw light on receptor endocytosis and selection of endosomal cargoes. Bioinformatics (Oxford). v. 26, p. 1477-1480, 2010. Qualis: A1
24.	De Souza, Robson F.; Iyer, Lakshminarayan M. ; Aravind, L.. Diversity and evolution of chromatin proteins encoded by DNA viruses. BBA-GENE REGUL MECH. v. 1799, p. 302-318, 2010. Qualis: Não identificado (BBA-GENE REGUL MECH)
25.	DEMARCO, R. ; Mathieson, W. ; Manuel, S. J. ; Dillon, G. P. ; Curwen, R. S. ; Ashton, P. D. ; Ivens, A. C. ; Berriman, M. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Wilson, R. A.. Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts. Genome Research. v. 20, p. 1112-1121, 2010. Qualis: A1
26.	DENTILLO, D. B. ; Meola, J. ; Rosa e Silva, J. C. ; GIULIATTI, S. ; SILVA, W. A. ; FERRIANI, R. A. ; Martelli, L. ; MARTELLI, L.. Deregulation of LOXL1 and HTRA1 Gene Expression in Endometriosis. Reproductive Sciences (Thousand Oaks, Calif.). v. 17, p. 1016-1023, 2010. Qualis: A2
27.	Facciotti, Marc T ; Pang, Wyming L ; Lo, Fang-yin ; Whitehead, Kenia ; KOIDE, T. ; Masumura, Ken-ichi ; Pan, Min ; Kaur, Amardeep ; Larsen, David J ; Reiss, David J ; Hoang, Linh ; Kalisiak, Ewa ; Northen, Trent ; Trauger, Sunia A ; Siuzdak, Gary ; Baliga, Nitin S. Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis. BMC Systems Biology. v. 4, p. 64, 2010. Qualis: A1
28.	Ferreira, Elisa N. ; Maschietto, Mariana ; Silva, Sabrina D. ; BRENTANI, HELENA ; Carraro, Dirce M.. Evaluation of Quantitative RT-PCR Using Nonamplified and Amplified RNA. Diagnostic Molecular Pathology (Print). v. 19, p. 45-53, 2010. Qualis: Não identificado (DIAGNOSTIC MOLECULAR PATHOLOGY)
29.	Fogaça, Andréa C. ; ZAINI, Paulo A. ; Wulff, Nelson A. ; da Silva, Patrícia I.P. ; Fázio, Marcos A. ; Miranda, Antônio ; Daffre, Sirlei ; da Silva, Aline M.. Effects of the antimicrobial peptide gomesin on the global gene expression profile, virulence and biofilm formation of. FEMS Microbiology Letters. v. 306, p. 152-159, 2010. Qualis: B2
30.	Frederigue-Lopes, N. B. ; Bevilacqua, M. C. ; Sameshima, Koichi ; Costa Filho, O. A.. Desempenho de crianças normais em testes temporais auditivos em campo livre. Pró-Fono (Impresso). v. 22, p. 83-88, 2010. Qualis: Não identificado (PRÓ-FONO)
31.	Freschi, L. ; Rodrigues, M. A. ; Domingues, D. S. ; Purgatto, E. ; Van Sluys, M. A. ; Magalhaes, J. R. ; Kaiser, W. M. ; Mercier, H.. Nitric Oxide Mediates the Hormonal Control of Crassulacean Acid Metabolism Expression in Young Pineapple Plants. Plant Physiology (Bethesda). v. 152, p. 1971-1985, 2010. Qualis: A1
32.	FUJITA, A.; Kojima, K. ; PATRIOTA, A. G. ; Sato, J. R. ; SEVERINO, P. ; Miyano, S.. A fast and robust statistical test based on Likelihood ratio with Bartlett correction to identify Granger causality between gene sets. Bioinformatics (Oxford. Print). v. 26, p. 2349-2351, 2010. Qualis: Não identificado (PRINT))
33.	FUJITA, A.; Nagasaki, M. ; Imoto, S. ; SAITO, A. ; IKEDA, E. ; Shimamura, T. ; Yamaguchi, Rui ; HAYASHIZAKI, Y. ; Miyano, Satoru. Comparison of gene expression profiles produced by CAGE, illumina microarray and Real Time RT-PCR.. Genome Informatics. v. 24, p. 56-68, 2010.Qualis: Não identificado (GENOME INFORMATICS)
34.	FUJITA, A; SEVERINO, P. ; Sato, Joao R ; Miyano, Satoru. Granger causality in systems biology: modeling gene networks in time series microarray data using vector autoregressive models. Lecture Notes in Computer Science. v. 6268, p. 13-24, 2010. Qualis: C
35.	Fujita, André; SATO, João Ricardo ; KOJIMA, KANAME ; GOMES, LUCIANA RODRIGUES ; NAGASAKI, MASAO ; SOGAYAR, Mari Cleide ; Miyano, Satoru. IDENTIFICATION OF GRANGER CAUSALITY BETWEEN GENE SETS. Journal of Bioinformatics and Computational Biology (Print). v. 08, p. 679, 2010. Qualis: B1
36.	Gomes, Verônica Souza da Mota ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S. ; Silva, Clóvis Oliveira ; Scarano, Fábio Rubio ; Araujo, Dorothy Sue Dunn ; Alves, Maria Alice S.. Availability peak of caloric fruits coincides with energy-demanding seasons for resident and non-breeding birds in restinga, an ecosystem related to the Atlantic forest, Brazil. Flora (Jena). v. 205, p. 647-655, 2010. Qualis: A3
37.	Grandis, Adriana ; Godoi, Simone ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S.. Respostas fisiológicas de plantas amazônicas de regiões alagadas às mudanças climáticas globais. Brazilian Journal of Botany. v. 33, p. 1-12, 2010. Qualis: B1
38.	Guimaraes, A.M.S.; Brandão, P.E. ; MORAES, W. ; Kiihl, S. ; Santos, L.C. ; FILONI, C. ; Cubas, Z.S. ; Robes, R.R. ; Marques, L.M. ; Neto, R.L.. Detection of Bartonella spp. in neotropical felids and evaluation of risk factors and hematological abnormalities associated with infection. Veterinary Microbiology (Amsterdam. Print). v. 142, p. 346-351, 2010. Qualis: Não identificado (PRINT))
39.	Harwich, Michael D ; Alves, Joao M ; Buck, Gregory A ; Strauss, Jerome F ; Patterson, Jennifer L ; Oki, Aminat T ; Girerd, Philippe H ; Jefferson, Kimberly K. Drawing the line between commensal and pathogenic Gardnerella vaginalis through genome analysis and virulence studies. BMC Genomics. v. 11, p. 375-387, 2010. Qualis: A2
40.	Hotta, Carlos T. ; Lembke, Carolina G. ; Domingues, Douglas S. ; Ochoa, Edgar A. ; Cruz, Guilherme M. Q. ; Melotto-Passarin, Danila M. ; Marconi, Thiago G. ; Santos, Melissa O. ; Mollinari, Marcelo ; Margarido, Gabriel R. A. ; Crivellari, Augusto César ; Santos, Wanderley D. ; Souza, Amanda P. ; Hoshino, Andrea A. ; Carrer, Helaine ; Souza, Anete P. ; Garcia, Antônio A. F. ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S. ; Menossi, Marcelo ; Sluys, Marie-Anne. The Biotechnology Roadmap for Sugarcane Improvement. Tropical Plant Biology (Online). v. 3, p. 75-87, 2010. Qualis: A3
41.	HÜNEMEIER, T.; ACUNA-ALONZO, V. ; SALZANO, F. M. ; BORTOLINI, M. C. ; CANIZALES-QUINTEROS, S.. A functional ABCA1 gene variant is associated with low HDL-cholesterol levels and shows evidence of positive selection in Native Americans. Human Molecular Genetics (Print). v. 19, p. 2877-2885, 2010. Qualis: A1
42.	HÜNEMEIER, T.; Ruiz-Linares, Andres ; Silveira, Álvaro ; Paixão-Côrtes, Vanessa Rodrigues ; Salzano, Francisco M. ; Bortolini, Maria Cátira. Brief communication: Population data support the adaptive nature of HACNS1 sapiens/neandertal-chimpanzee differences in a limb expression domain. American Journal of Physical Anthropology,. p. n/a-n/a, 2010. Qualis: A2 (AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY)
43.	Iyer, L. M. ; Abhiman, S. ; de Souza, R. F. ; Aravind, L.. Origin and evolution of peptide-modifying dioxygenases and identification of the wybutosine hydroxylase/hydroperoxidase. Nucleic Acids Research,. p. gkq265, 2010. Qualis: A1 (NUCLEIC ACIDS RESEARCH)
44.	Kamenetzky, L. ; Asis, R. ; Bassi, S. ; de Godoy, F. ; Bermudez, L. ; Fernie, A. R. ; Van Sluys, M. A. ; Vrebalov, J. ; Giovannoni, J. J. ; ROSSI, M. ; Carrari, F.. Genomic Analysis of Wild Tomato Introgressions Determining Metabolism- and Yield-Associated Traits. Plant Physiology (Bethesda). v. 152, p. 1772-1786, 2010. Qualis: A1
45.	Lang, Jillian M. ; Hamilton, John P. ; Diaz, Maria Genaleen Q. ; Van Sluys, Marie Anne ; Burgos, Ma. Ruby G. ; Vera Cruz, Casiana M. ; Buell, C. Robin ; Tisserat, Ned A. ; Leach, Jan E.. Genomics-Based Diagnostic Marker Development for pv. and pv.. Plant Disease. v. 94, p. 311-319, 2010. Qualis: A2
46.	MACHADO, B.S. ; MIRANDA, T.B. ; Morya, E. ; AMARO, E. ; Sameshima, K.. P24-23 Algorithmic complexity measure of EEG for staging brain state. Clinical Neurophysiology. v. 121, p. S249-S250, 2010. Qualis: A2
47.	MACHADO-LIMA, A. ; KASHIWABARA, A. Y. ; DURHAM, A. M.. Decreasing the number of false positives in sequence classification. BMC Genomics. v. 11, p. S10, 2010. Qualis: A2
48.	Manicassamy, S. ; Reizis, B. ; Ravindran, R. ; Nakaya, H. ; Salazar-Gonzalez, R. M. ; Wang, Y.-c. ; Pulendran, B.. Activation of -Catenin in Dendritic Cells Regulates Immunity Versus Tolerance in the Intestine. Science (New York, N.Y.). v. 329, p. 849-853, 2010. Qualis: A1
49.	Mantzouranis, Luciana ; Bagattini, Raquel ; Souza, Glaucia M. KeaA, a Dictyostelium kelch-domain protein that regulates the response to stress and development. BMC Developmental Biology (Online). v. 10, p. 79, 2010. Qualis: B1
50.	Marques, Lucas ; Ueno, Priscilla M ; Buzinhani, Melissa ; Cortez, Beatriz A ; Neto, Renata L ; Yamaguti, Maurício ; Oliveira, Rosângela C ; GUIMARAES, A. M. S. ; Monezi, Telma A ; Braga, Antonio ; Machado-Santelli, Gláucia M ; Timenetsky, Jorge. Invasion of Ureaplasma diversum in Hep-2 cells. BMC Microbiology (Online). v. 10, p. 83, 2010. Qualis: A2
51.	Matos, G. ; Tsai, R. ; Baldo, M. V. C. ; Castro, I. ; Sameshima, K ; Valle, A. C.. The sleep?wake cycle in adult rats following pilocarpine-induced temporal lobe epilepsy. Epilepsy & Behavior. v. 17, p. 324-331, 2010. Qualis: A3
52.	Meola, Juliana ; Rosa e Silva, Júlio César ; Dentillo, Daniel Blassioli ; da Silva, Wilson Araújo ; Veiga-Castelli, Luciana Caricati ; de Souza Bernardes, Luciano Angelo ; Ferriani, Rui Alberto ; de Paz, Claudia Cristina Paro ; Giuliatti, Silvana ; Martelli, Lúcia. Differentially expressed genes in eutopic and ectopic endometrium of women with endometriosis. Fertility and Sterility. v. 93, p. 1750-1773, 2010. Qualis: A1
53.	Moreira, Leandro M ; Almeida, Nalvo F ; Potnis, Neha ; DIGIAMPIETRI, L. A. ; Adi, Said S ; Bortolossi, Julio C ; da Silva, Ana C ; da Silva, Aline M ; de Moraes, Fabricio E ; de Oliveira, Julio C ; de SOUZA, Robson Francisco ; Fancincani, Agda P ; Ferraz, Andre L ; Ferro, Maria I ; Furlan, Luiz R ; Gimenez, Daniele F ; Jones, Jeffrey B ; Kitajima, Elliot W ; Laia, Marcelo L ; Leite, Rui P. Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii. BMC GENOMICS. v. 11, p. 238, 2010. Qualis: A2
54.	Moreira, Leandro M ; de Laia, Marcelo L ; De Souza, Robson F ; Zaini, Paulo A ; da Silva, Ana CR ; da Silva, Aline M ; Ferro, Jesus A. Development and validation of a Xanthomonas axonopodis pv. citri DNA microarray platform (XACarray) generated from the shotgun libraries previously used in the sequencing of this bacterial genome. BMC Research Notes. v. 3, p. 150, 2010. Qualis: B1
55.	NIIDA, A. ; Imoto, S. ; Yamaguchi, R. ; Nagasaki, M. ; FUJITA, A. ; Shimamura, T. ; Miyano, S.. Model-free unsupervised gene set screening based on information enrichment in expression profiles. Bioinformatics (Oxford. Print). v. 26, p. 3090-3097, 2010. Qualis: Não identificado (PRINT))
56.	Nishiyama-Junior, M. Y. ; VICENTE, F. F. R. ; Lembke, Carolina G ; Sato, Paloma M. ; Costa, M. D-B. C. ; DAL-BIANCO, M. L. ; ANDRADE, R. F. ; Hotta, Carlos T. ; SOUZA, GLAUCIA MENDES. The SUCEST-FUN Regulatory Network Database: Designing and Energy Grass. Sugar Cane International. v. 27, p. 1-15, 2010.Qualis: Não identificado (SUGAR CANE INTERNATIONAL)
57.	OIKAWA, M. K. ; MERINO, E. F. ; FERNANDEZ-BECERRA, C. ; WUNDERLICH, G. ; VILLALOBOS, J. M. ; SILVA, P. P. S. B. ; BARRERA, J. ; DURHAM, A. M. ; DELPORTILLO, H. A. ; FERREIRA, J. E.. CLINMALDB: A Clinical Field-Research Oriented Relational Database to Study Human Malaria. IADIS International Journal on WWWInternet. v. 8, p. 181-191, 2010.Qualis: C (IADIS INTERNATIONAL JOURNAL ON WWW/INTERNET)
58.	Oliveira Júnior, Clóvis J. F. ; Cavalari, Aline A. ; Carpita, Nicholas C. ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S. ; Braga, Marcia R.. Cell wall polysaccharides from cell suspension cultures of the Atlantic Forest tree Rudgea jasminoides (Rubiaceae). Trees (Berlin. Print). v. 24, p. 713-722, 2010. Qualis: Não identificado (PRINT))
59.	OLIVEIRA, LARIZA L. DE ; PERSINOTI, GABRIELA F. ; Giuliatti, Silvana ; TINÓS, RENATO. Feature Selection via Genetic Algorithms in the Classification of Anti-Snake Venom Medicinal Plants. LEARNING AND NONLINEAR MODELS. v. 8, p. 125-134, 2010. Qualis: B2
60.	Oliveira, S.T. ; MESSICK, J. B. ; BIONDO, A. W. ; Santos, A.P. ; GUIMARAES, A. M. S. ; MOHAMED, A. ; Pires Neto, J.A.S. ; Dalmonin, M.L. ; GONZALEZ, F. H. D.. Serum and Urinary C-Reactive Protein Concentrations in Dogs with Leptospirosis. Acta Scientiae Veterinariae (Online). v. 38, p. 243-247, 2010.Qualis: B1
61.	Olivero, Ofelia A. ; Larramendy, Marcelo ; Soloneski, Sonia ; Menck, Carlos F.M. ; Matta, Jaime ; Folle, Gustavo A. ; Zamorano-Ponce, Enrique ; Spivak, Graciela. Impact of EMS outreach: Successful developments in Latin America. Environmental and Molecular Mutagenesis,. p. NA-NA, 2010. Qualis: A3 (ENVIRONMENTAL AND MOLECULAR MUTAGENESIS)
62.	Pulendran, Bali ; Li, Shuzhao ; Nakaya, Helder I.. Systems Vaccinology. Immunity (Cambridge, Mass.). v. 33, p. 516-529, 2010. Qualis: A1
63.	RIBEIRO, T. C. ; VENTRICE, G. ; MACHADO-LIMA, A. ; ANDRIOLI, L. P.. Investigating Giant (Gt) Repression in the Formation of Partially Overlapping Pair-Rule Stripes. Developmental Dynamics. v. 239, p. 2989-2999, 2010. Qualis: A3
64.	ROZENCHAN, P. B. ; CARRARO, D. M. ; BRENTANI, H. P. ; MOTA, L. D. ; BASTOS, E. P. ; FERREIRA, E. N. E. ; TORRES, C. H. ; KATAYAMA, M. L. H. ; ROELA, R. A. ; LYRA, E. C. ; SOARES, F. A. ; FOLGUEIRA, M. A. A. K. ; GOES, J. C. G. S. ; BRENTANI, M. M.. Reciprocal changes in gene expression profiles of cocultured breast epithelial cells and primary fibroblasts. International Journal of Cancer (Print). v. 125, p. 2767-2777, 2010. Qualis: A1
65.	Saffi, Jenifer ; Agnoletto, Mateus H. ; Guecheva, Temenouga N. ; Batista, Luís F.Z. ; Carvalho, Helotonio ; Henriques, João A.P. ; Stary, Anne ; Menck, Carlos F.M. ; Sarasin, Alain. Effect of the anti-neoplastic drug doxorubicin on XPD-mutated DNA repair-deficient human cells. DNA Repair (Print). v. 9, p. 40-47, 2010. Qualis: A1
66.	Sato, João R. ; Fujita, André ; Cardoso, Elisson F. ; Thomaz, Carlos E. ; Brammer, Michael J. ; Amaro Jr., Edson. Analyzing the connectivity between regions of interest: An approach based on cluster Granger causality for fMRI data analysis. NeuroImage (Orlando). v. 52, p. 1444-1455, 2010. Qualis: A1
67.	Schuch, André Passaglia ; Menck, Carlos Frederico Martins. The genotoxic effects of DNA lesions induced by artificial UV-radiation and sunlight. Journal of Photochemistry and Photobiology. B, Biology. v. 99, p. 111-116, 2010. Qualis: Não identificado (B, BIOLOGY)
68.	Sebollela, Adriano ; Freitas-Corrêa, Léo ; Oliveira, Fábio F. ; Mendes, Camila T. ; Wasilewska-Sampaio, Ana Paula ; Camacho-Pereira, Juliana ; Galina, Antonio ; BRENTANI, HELENA ; Passetti, Fabio ; Felice, Fernanda G. ; Dias-Neto, Emmanuel ; Ferreira, Sérgio T.. Expression Profile of Rat Hippocampal Neurons Treated with the Neuroprotective Compound 2,4-Dinitrophenol: Up-Regulation of cAMP Signaling Genes. Neurotoxicity Research. v. 18, p. 112-123, 2010. Qualis: A3
69.	Shimamura, T. ; Imoto, S. ; Nagasaki, M. ; YAMAUCHI, M. ; Yamaguchi, Rui ; FUJITA, A. ; Tamada, Y. ; GOTOH, N. ; Miyano, Satoru. Collocation-based sparse estimation for constructing dynamic gene networks. Genome Informatics. v. 24, p. 164-178, 2010.Qualis: Não identificado (GENOME INFORMATICS)
70.	Shulaev, Vladimir ; Sargent, Daniel J ; Crowhurst, Ross N ; Mockler, Todd C ; Folkerts, Otto ; Delcher, Arthur L ; Jaiswal, Pankaj ; Mockaitis, Keithanne ; Liston, Aaron ; Mane, Shrinivasrao P ; Burns, Paul ; Davis, Thomas M ; Slovin, Janet P ; Bassil, Nahla ; Hellens, Roger P ; Evans, Clive ; Harkins, Tim ; Kodira, Chinnappa ; Desany, Brian ; SETUBAL, J. C.. The genome of woodland strawberry (Fragaria vesca). Nature Genetics (Print). v. 43, p. 109-116, 2010. Qualis: A1
71.	Simões, C. S. ; Vianney, P. V. R. ; Moura, M. M. ; Freire, M. A.M. ; Mello, L. E. ; Araújo, J. F. ; Sameshima, Koichi ; Mello, C. V. ; Ribeiro, S.. Activation of frontal neocortical areas by vocal production in marmosets. Frontiers in Integrative Neuroscience. v. 4, p. 1-12, 2010. Qualis: A2
72.	Soccol, Carlos Ricardo ; Vandenberghe, Luciana Porto de Souza ; Medeiros, Adriane Bianchi Pedroni ; Karp, Susan Grace ; Buckeridge, Marcos ; BUCKERIDGE, M. S. ; Ramos, Luiz Pereira ; Pitarelo, Ana Paula ; Ferreira-Leitão, Viridiana ; Gottschalk, Leda Maria Fortes ; Ferrara, Maria Antonieta. Bioethanol from lignocelluloses: Status and perspectives in Brazil. Bioresource Technology. v. 101, p. 4820-4825, 2010. Qualis: A1
73.	SOLER, J. M. P.; Giolo, S.R. ; PEREIRA, A. C. ; de Andrade, M. ; KRIEGER, J. E.. Evaluating gene by sex and age interactions on cardiovascular risk factors in Brazilian families. BMC Medical Genetics (Online). v. 11, p. 132, 2010. Qualis: A4
74.	Souza, Beatriz M. ; Molfetta-Machado, Jeanne B. ; Freschi, Luciano ; Figueira, Antonio ; Purgatto, Eduardo ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S. ; Sluys, Marie-Anne ; Mercier, Helenice. Axillary bud development in pineapple nodal segments correlates with changes on cell cycle gene expression, hormone level, and sucrose and glutamate contents. In Vitro Cellular & Developmental Biology. Plant. v. 46, p. 281-288, 2010. Qualis: C
75.	Takahashi, D. Y. ; Baccalá, L. A. ; Sameshima, Koichi. Information theoretic interpretation of frequency domain connectivity measures. Biological Cybernetics. v. 103, p. 463-469, 2010. Qualis: A2
76.	Tang, Hua ; Cao, Weiping ; Kasturi, Sudhir Pai ; Ravindran, Rajesh ; Nakaya, Helder I ; Kundu, Kousik ; Murthy, Niren ; Kepler, Thomas B ; Malissen, Bernard ; Pulendran, Bali. The T helper type 2 response to cysteine proteases requires dendritic cell¿basophil cooperation via ROS-mediated signaling. Nature Immunology. v. 11, p. 608-617, 2010. Qualis: A1
77.	Teixeira, Andre Azevedo Reis ; LUND, Mikael ; Da SILVA, F. L. B.. Fast Proton Titration Scheme for Multiscale Modeling of Protein Solutions. Journal of Chemical Theory and Computation. v. 6, p. 3259-3266, 2010. Qualis: A1
78.	Tiller, R. V. ; Gee, J. E. ; Frace, M. A. ; Taylor, T. K. ; SETUBAL, J. C. ; Hoffmaster, A. R. ; De, B. K.. Characterization of novel Brucella strains originating from wild native rodent species in North Queensland, Australia. Applied and Environmental Microbiology (Print). v. 76, p. 5837-5845, 2010. Qualis: A1
79.	TONINI, P. P. ; Purgatto, E. ; BUCKERIDGE, M. S.. Effects of abscisic acid, ethylene and sugars on the mobilization of storage proteins and carbohydrates in seeds of the tropical tree Sesbania virgata (Leguminosae). Annals of Botany (Print). v. 106, p. 607-616, 2010. Qualis: A1
80.	Tonini, Patricia P. ; Carrara, Thalita B. ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S.. Storage proteins and cell wall mobilisation in seeds of Sesbania virgata (Cav.) Pers. (Leguminosae). Trees (Berlin. Print). v. 24, p. 675-684, 2010. Qualis: Não identificado (PRINT))
81.	TORTO-ALALIBO, T. ; Collmer, C. W. ; GWINN-GIGLIO, M. ; Lindeberg, M. ; Meng, S. ; Chibucos, M. C. ; Tseng, T.-T. ; Lomax, J. ; Biehl, B. ; Ireland, A. ; Bird, D. ; Dean, R. A. ; Glasner, J. D. ; PERNA, N. ; SETUBAL, J. C. ; COLLMER, A. ; Tyler, B. M.. Unifying Themes in Microbial Associations with Animal and Plant Hosts Described Using the Gene Ontology. Microbiology and Molecular Biology Reviews. v. 74, p. 479-503, 2010. Qualis: Não identificado (MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS)
82.	Ullmann, Leila Sabrina ; da Silva, Rodrigo Costa ; de Moraes, Wanderlei ; Cubas, Zalmir Silvino ; dos Santos, Leonilda Correia ; Hoffmann, Juliano Leônidas ; Moreira, Nei ; Guimaraes, Ana Marcia Sa ; Montaño, Patrícia ; Langoni, Helio. Serological survey of Toxoplasma gondii in captive Neotropical felids from Southern Brazil. Veterinary Parasitology (Print). v. 172, p. 144-146, 2010. Qualis: A1
83.	Venancio, Thiago M. ; Wilson, R. Alan ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; DEMARCO, Ricardo. Bursts of transposition from non-long terminal repeat retrotransposon families of the RTE clade in Schistosoma mansoni. International Journal for Parasitology. v. 40, p. 743-749, 2010. Qualis: A1
84.	VIBRANOVSKI, M. D.; CHALOPIN, D.S. ; LOPES, H. F. ; LONG, M. ; KARR, T. L.. Direct Evidence for Postmeiotic Transcription During Drosophila melanogaster Spermatogenesis. Genetics (Austin, Tex.). v. 186, p. 431-433, 2010. Qualis: A2
85.	Waclawovsky, Alessandro J. ; Sato, Paloma M. ; Lembke, Carolina G. ; Moore, Paul H. ; Souza, Glaucia M.. Sugarcane for bioenergy production: an assessment of yield and regulation of sucrose content. Plant Biotechnology Journal. v. 8, p. 263-276, 2010. Qualis: A1
86.	Wang, Jianping ; Roe, Bruce ; Macmil, Simone ; Yu, Qingyi ; Murray, Jan ; Tang, Haibao ; Chen, Cuixia ; Najar, Fares ; Wiley, Graham ; Bowers, John ; Van Sluys, Marie-Anne ; Rokhsar, Daniel S ; Hudson, Matthew E ; Moose, Stephen P ; Paterson, Andrew H ; Ming, Ray. Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes. BMC Genomics. v. 11, p. 261, 2010. Qualis: A2
87.	Warren, Andrew S ; Archuleta, Jeremy ; Feng, Wu-chun ; Setubal, Joao Carlos. Missing genes in the annotation of prokaryotic genomes. BMC BIOINFORMATICS. v. 11, p. 131, 2010. Qualis: A1
88.	ZHANG, Y. E. ; VIBRANOVSKI, M. D. ; KRINSKY, B. H. ; LONG, M.. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Genome Research. v. 20, p. 1526-1533, 2010. Qualis: A1
89.	ZHANG, YONG E. ; VIBRANOVSKI, MARIA D. ; LANDBACK, PATRICK ; MARAIS, GABRIEL A. B. ; LONG, MANYUAN. Chromosomal Redistribution of Male-Biased Genes in Mammalian Evolution with Two Bursts of Gene Gain on the X Chromosome. PLoS Biology (Online). v. 8, p. e1000494, 2010. Qualis: A1

2009

1.	ALMEIDA, F. M. ; BONINI, B. M. ; BETON, Daniela ; Jorge, J.A. ; TERENZI, H. F. ; DA SILVA, A. M.. Heterologous expression in Escherichia coli of Neurospora crassa neutral trehalase as an active enzyme. Protein Expression and Purification. v. 65, p. 185-189, 2009. Qualis: B2
2.	Almeida, Nalvo F. ; Yan, Shuangchun ; Lindeberg, Magdalen ; Studholme, David J. ; Schneider, David J. ; Condon, Bradford ; Liu, Haijie ; Viana, Carlos J. ; Warren, Andrew ; Evans, Clive ; Kemen, Eric ; MacLean, Dan ; Angot, Aurelie ; Martin, Gregory B. ; Jones, Jonathan D. ; Collmer, Alan ; Setubal, Joao C. ; Vinatzer, Boris A.. A Draft Genome Sequence of Pseudomonas syringae pv. tomato T1 Reveals a Type III Effector Repertoire Significantly Divergent from That of Pseudomonas syringae pv. tomato DC3000. Molecular Plant-Microbe Interactions. v. 22, p. 52-62, 2009. Qualis: A1
3.	AMARAL, L. I. V. ; Cortelazzo, Ângelo L. ; CORTELAZZO, A. L. ; BUCKERIDGE, M. S. ; PEREIRA, L. A. R.. Anatomical and biochemical changes in the composition of developing seed coats of annatto (Bixa orellana L.). Trees (Berlin). v. 23, p. 287-293, 2009. Qualis: A2
4.	ANEAS, I. ; Rodrigues, MV ; Pauletti, BA ; Silva, GJJ ; Carmona, R ; Cardoso, L ; Kwitek, AE ; Jacob, HJ ; SOLER, J. M. P. ; KRIEGER, J. E.. Congenic strains provide evidence that four mapped loci in chromosomes 2, 4, and 16 influence hypertension in the SHR. Physiological Genomics (Print). v. 3, p. 52-57, 2009.Qualis: A3
5.	Arashiro, P. ; Eisenberg, I. ; Kho, A. T. ; Cerqueira, A. M. P. ; Canovas, M. ; Silva, H. C. A. ; Pavanello, R. C. M. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Kunkel, L. M. ; ZATZ, M.. Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers. PNAS. Proceedings of the National Academy of Sciences of the United States of America. v. 106, p. 6220-6225, 2009. Qualis: A1
6.	Araújo, F. M. G. ; MACHADO-LIMA, A. ; DURHAM, A.M. ; TEIXEIRA, R. ; OLIVEIRA, G. C.. Sequence and structural analysis of the 5- noncoding region of hepatitis C virus in patients with chronic infection. Journal of Medical Virology. v. 81, p. 1212-1219, 2009. Qualis: B1
7.	Batista, L. F.Z. ; Roos, W. P. ; KAINA, B. ; Menck, C. F.M.. p53 Mutant Human Glioma Cells Are Sensitive to UV-C-Induced Apoptosis Due to Impaired Cyclobutane Pyrimidine Dimer Removal. Molecular Cancer Research. v. 7, p. 237-246, 2009. Qualis: A2
8.	Batista, Luís F.Z. ; Kaina, Bernd ; Meneghini, Rogério ; Menck, Carlos F.M.. How DNA lesions are turned into powerful killing structures: Insights from UV-induced apoptosis. Mutation Research. Reviews in Mutation Research. v. 681, p. 197-208, 2009. Qualis: Não identificado (REVIEWS IN MUTATION RESEARCH)
9.	BETTONI, F. ; CAMARGO FILHO, F. ; GROSSO, D. M. ; GALANTE, P. A. F. ; PARMIGIANI, R. B. ; GERALDO, M. V. ; SILVA, F. H. ; OBA-SHINJO, S. M. ; MARIE, S. K. M. ; SOARES, F. A. ; BRENTANI, H. P. ; SIMPSON, A. J. G. ; DE SOUZA, S. J. ; CAMARGO, A. A.. Identification of FAM46D as a novel cancer/testis antigen using EST data and serological analysis. Genomics (San Diego). v. 94, p. 153-160, 2009. Qualis: A3
10.	BIONDO, A. W. ; Santos, A.P. ; GUIMARAES, A. M. S. ; VIEIRA, R. F. C. ; VIDOTTO, O. ; MACIEIRA, D. ; Almosny, N.R.P. ; Molento, Marcelo B. ; TIMENETSKY, J. ; de Morais, H. A. ; GONZALEZ, F. H. D. ; MESSICK, J. B.. A review of the occurrence of hemoplasmas (hemotrophic mycoplasmas) in Brazil.. Revista Brasileira de Parasitologia Veterinária. v. 18, p. 1-7, 2009.Qualis: A2
11.	BITARELLO, B.D. ; TORRES, T.T. ; LYRA, M.L. ; AZEREDO-ESPIN, A.M.L.. Development of polymorphic microsatellite markers for the human botfly, Dermatobia hominis (Diptera: Oestridae). Molecular Ecology Resources (Online). v. 9, p. 409-411, 2009. Qualis: A1
12.	CALMON, M. F. ; RODRIGUES, R. V. ; KANETO, C. M. ; MOURA, R. P. ; SILVA, S. D. ; MOTA, L. D. C. ; PINHEIRO, D. G. ; TORRES, C. H. ; CARVALHO, A. F. ; CURY, P. M. ; NUNES, F. D. ; NISHIMOTO, I. N. ; SOARES, F. A. ; SILVA, A. M. ; KOWALSKI, L. P. ; BRENTANI, H. ; ZANELLI, C. ; SILVA, W. A. ; RAHAL, P. ; TAJARA, H. H.. Epigenetic silencing of CRABP2 and MX1 in head and neck tumors. Neoplasia (New York, N.Y.). v. 11, p. 1329-1339, 2009. Qualis: A2
13.	CARVALHO, R.A. ; TORRES, T. T. ; PANIAGO, M.D.G. ; AZEREDO-ESPIN, A.M.L.. Molecular characterization of esterase E3 gene associated with organophosphorus insecticide resistance in the New World screwworm fly,. Medical and Veterinary Entomology. v. 23, p. 86-91, 2009. Qualis: A2
14.	Castelli, Erick C. ; Moreau, Philippe ; Chiromatzo, Alynne Oya e ; Mendes-Junior, Celso Teixeira ; Veiga-Castelli, Luciana C. ; Yaghi, Layale ; Giuliatti, Silvana ; Carosella, Edgardo D. ; Donadi, Eduardo Antonio. In silico analysis of microRNAS targeting the HLA-G 3⿲ untranslated region alleles and haplotypes. Human Immunology. v. 70, p. 1020-1025, 2009. Qualis: B1
15.	Chibucos, Marcus C. ; Tseng, Tsai-Tien ; Setubal, João C.. Describing commonalities in microbial effector delivery using the Gene Ontology. Trends in Microbiology. v. 17, p. 312-319, 2009. Qualis: A1
16.	Corrêa Soares, Juliana B. R. ; Menezes, Diego ; Vannier-Santos, Marcos A. ; Ferreira-Pereira, Antonio ; Almeida, Giulliana T. ; Venancio, Thiago M. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Zishiri, Vincent K. ; Kuter, David ; Hunter, Roger ; Egan, Timothy J. ; Oliveira, Marcus F.. Interference with Hemozoin Formation Represents an Important Mechanism of Schistosomicidal Action of Antimalarial Quinoline Methanols. Plos Neglected Tropical Diseases. v. 3, p. e477, 2009. Qualis: A1
17.	da Cunha, J. P. C. ; Old, L. J. ; Caballero, O. ; de SOUZA, Robson Francisco ; de Souza, J. E. ; de Souza, S. J. ; Ohara, D. T. ; Gama-Rodrigues, J. ; Oba-Shinja, S. M. ; Galante, P. A. F. ; Stransky, B. ; Simpson, A. J. ; Carvalho, P. M. ; SILVA, W. A. ; Moura, R. P. ; Moore, J. ; marie sk ; MARIE, S. K. N. ; Habr-Gama, A. ; Pieprzyk, M.. Bioinformatics construction of the human cell surfaceome. Proceedings of the National Academy of Sciences of the United States of America (Online). v. 106, p. 16752-16757, 2009. Qualis: A1
18.	da Silva, Fernando Luís Barroso; JÖNSSON, Bo. Polyelectrolyte¿protein complexation driven by charge regulation. Soft Matter. v. 5, p. 2862-2868, 2009. Qualis: A2
19.	de Setta, Nathalia ; Van Sluys, Marie-Anne ; Capy, Pierre ; Carareto, Claudia MA. Multiple invasions of Gypsy and Micropia retroelements in genus Zaprionus and melanogaster subgroup of the genus Drosophila. BMC Evolutionary Biology (Online). v. 9, p. 279, 2009. Qualis: A1
20.	De Souza, Robson F; Iyer, Lakshminarayan M ; Aravind, L. The Anabaena sensory rhodopsin transducer defines a novel superfamily of prokaryotic small-molecule binding domains. Biology Direct. v. 4, p. 25, 2009. Qualis: Não identificado (BIOLOGY DIRECT)
21.	DEMARCO, Ricardo ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Schistosomes - proteomics studies for potential novel vaccines and drug targets. Drug Discovery Today. v. 14, p. 472-478, 2009. Qualis: A1
22.	DIAS-NETO, Emmanuel ; Nunes, Diana N. ; Giordano, Ricardo J. ; Sun, Jessica ; Botz, Gregory H. ; Yang, Kuan ; Setubal, João C. ; Pasqualini, Renata ; Arap, Wadih ; HO, Paulo Lee. Next-Generation Phage Display: Integrating and Comparing Available Molecular Tools to Enable Cost-Effective High-Throughput Analysis. Plos One. v. 4, p. e8338, 2009. Qualis: A1
23.	Diogo, Luciana C. ; Fernandes, Renata S. ; Marcussi, Silvana ; Menaldo, Danilo L. ; Roberto, Patrí­cia G. ; Matrangulo, Paula V. F. ; Pereira, Paulo S. ; França, Suzelei C. ; Giuliatti, Silvana ; Soares, Andreimar M. ; Lourenço, Miriam V.. Inhibition of Snake Venoms and Phospholipases A 2 by Extracts from Native and Genetically Modified Eclipta alba : Isolation of Active Coumestans. Basic & Clinical Pharmacology & Toxicology (Print). v. 104, p. 293-299, 2009. Qualis: A3
24.	Dzirasa, K. ; Ramsey, A.J. ; Takahashi, D. Y. ; Stapleton, J. ; Potes, J. M. ; Williams, J.K. ; Gainetdinov, R. R. ; Sameshima, K ; Caron, M. G. ; Nicolelis, M. A. L.. Hyperdopaminergia and NMDA receptor hypofunction disrupt neural phase signaling. The Journal of Neuroscience. v. 29, p. 8215-8224, 2009. Qualis: A1
25.	Felix, Juliana ; Papini-Terzi, Flávia Stal ; Rocha, Flávia Riso ; Vêncio, Ricardo Zorzetto Nicoliello ; Vicentini, Renato ; Nishiyama, Milton Yutaka ; César Ulian, Eugênio ; Souza, Gláucia Mendes ; Menossi, Marcelo. Expression Profile of Signal Transduction Components in a Sugarcane Population Segregating for Sugar Content. Tropical Plant Biology (Print). v. 2, p. 98-109, 2009. Qualis: A3
26.	Ferrari, M F R ; Reis, E M ; Matsumoto, J P P ; Fior-Chadi, D R. Transcriptome analysis of nicotine-exposed cells from the brainstem of neonate spontaneously hypertensive and Wistar Kyoto rats. The Pharmacogenomics Journal. v. 10, p. 134-160, 2009. Qualis: A2 (PHARMACOGENOMICS JOURNAL)
27.	Ferrari, Merari F. R. ; Reis, Eduardo M. ; REIS, EM ; Matsumoto, João P. P. ; Fior-Chadi, Débora R.. Gene Expression Profiling of Cultured Cells From Brainstem of Newborn Spontaneously Hypertensive and Wistar Kyoto Rats. Cellular and Molecular Neurobiology. v. 29, p. 287-308, 2009. Qualis: A2
28.	Ferreira, C. d. S. ; Piedade, M. T. F. ; Tine, M. A. S. ; Rossatto, D. R. ; Parolin, P. ; BUCKERIDGE, M. S.. The role of carbohydrates in seed germination and seedling establishment of Himatanthus sucuuba, an Amazonian tree with populations adapted to flooded and non-flooded conditions. Annals of Botany (Print). v. 104, p. 1111-1119, 2009. Qualis: A1
29.	FOLGUEIRA, M. A. A. K. ; BRENTANI, H. P. ; CARRARO, D. M. ; BARROS FILHO, M. C. ; KATAYAMA, M. L. H. ; ABREU, A. P. S. ; BARBOSA, E. M. ; OLIVEIRA, C. T. ; PATRÃO, D. F. C. ; MOTA, L. D. ; MOURÃO NETO, M. ; CALDEIRA, J. R. F. ; BRENTANI, M. M.. Gene expression profile of residual breast cancer after doxorubicin and cyclophosphamide neoadjuvant chemotherapy. Oncology Reports. v. 22, p. 805-813, 2009. Qualis: A3
30.	Freschi, Luciano ; Nievola, Catarina Carvalho ; Rodrigues, Maria Aurineide ; DOMINGUES, Douglas Silva ; Van Sluys, Marie-Anne ; Mercier, Helenice. Thermoperiod affects the diurnal cycle of nitrate reductase expression and activity in pineapple plants by modulating the endogenous levels of cytokinins. Physiologia plantarum (Kobenhavn. 1948). v. 137, p. 201-212, 2009. Qualis: Não identificado (1948))
31.	FUJITA, A; SATO, João Ricardo ; SILVA, F. H. L. ; GALVAO, M. C. ; SOGAYAR, Mari Cleide ; Miyano, Satoru. Quality control and reproducibility in DNA microarray experiments. Genome Informatics. v. 23, p. 21-31, 2009.Qualis: Não identificado (GENOME INFORMATICS)
32.	Fujita, Andre; Patriota, Alexandre G ; Sato, Joao R ; Miyano, Satoru. The impact of measurement errors in the identification of regulatory networks.. BMC Bioinformatics. v. 10, p. 412, 2009. Qualis: A1
33.	Fujita, André; SATO, João Ricardo ; DEMASI, MARCOS ANGELO ALMEIDA ; SOGAYAR, Mari Cleide ; FERREIRA, Carlos Eduardo ; Miyano, Satoru. COMPARING PEARSON, SPEARMAN AND HOEFFDING'S D MEASURE FOR GENE EXPRESSION ASSOCIATION ANALYSIS. Journal of Bioinformatics and Computational Biology. v. 07, p. 663, 2009. Qualis: B1
34.	Gillespie, Joseph J. ; Ammerman, Nicole C. ; Dreher-Lesnick, Sheila M. ; Rahman, M. Sayeedur ; Worley, Micah J. ; Setubal, Joao C. ; Sobral, Bruno S. ; Azad, Abdu F.. An Anomalous Type IV Secretion System in Rickettsia Is Evolutionarily Conserved. Plos One. v. 4, p. e4833, 2009. Qualis: A1
35.	GODOY, J. R. L. DE ; MARABESI, M. ; MORTARI L.C. ; AIDAR, M. P. M. ; BUCKERIDGE, M. S.. A dinâmica da floresta neotropical e as mudanças climáticas globais. Naturalia (São José do Rio Preto). v. 32, p. 53-66, 2009.Qualis: Não identificado (NATURALIA)
36.	Gray J ; Bevan M ; Brutnell T ; Buell CR ; Cone K ; HAKE, S. ; JACKSON, D. ; KELLOGG, E. ; MCCOUCH, S. ; MOCKLER, T. ; MOOSE, S. ; PETERSON, T. ; ROKSHAR, D. ; SOUZA, G. M. ; SPRINGER, N. ; STEIN, N. ; TIMMERMANS, M. ; WANG, G. ; Grotewold E. A recommendation for naming transcription factor proteins in the grasses. Plant Physiology (Bethesda). v. 149, p. 4-6, 2009. Qualis: A1
37.	Guerreiro-Junior, V ; HÜNEMEIER, T. ; Marrero, AR ; SALZANO, F. M. ; BORTOLINI, M. C.. Genetic signatures of parental contribution in black and white populations in Brazil. Genetics and Molecular Biology (Impresso). v. 32, p. 1-11, 2009. Qualis: A4
38.	GUIMARAES, A. M. S.; BRANDAO, P. ; MORAES, W. ; CUBAS, Z. S. ; SANTOS, L. C. ; VILLAREAL, L. Y. B. ; ROBES, R. ; COELHO, F. ; RESENDE, M. ; SANTOS, R. C. F. ; OLIVEIRA, R. C. ; YAMAGUTI, M. ; MARQUES, L. M. ; LOPES NETO, R. ; BUZINHANI, M. ; Marques R. ; MESSICK, J. B. ; BIONDO, A. W. ; TIMENETSKY, J.. Survey of feline leukemia virus and feline coronaviruses in captive neotropical wild felids from Southern Brazil. Journal of Zoo and Wildlife Medicine. v. 40, p. 360-364, 2009.Qualis: A3
39.	HÜNEMEIER, T.; SALZANO, F. M. ; BORTOLINI, M. C.. TCOF1 T / Ser variant and brachycephaly in dogs. Animal Genetics. v. 40, p. 357-358, 2009. Qualis: A1
40.	Jucimara Colombo ; Fachel, Ângela A. ; Calmon, Marilia Freitas ; Patricia M. Cury ; Érica Erina Fukuyama ; Eloiza Helena Tajara ; Jose Antonio Cordeiro ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Reis, Eduardo M. ; Paula Rahal. Gene expression profiling reveals molecular marker candidates of laryngeal squamous cell carcinoma. Oncology Reports,. v. 21, p. 649-663, 2009. Qualis: A3 (ONCOLOGY REPORTS)
41.	Junta, Cristina Moraes ; Sandrin-Garcia, Paula ; Fachin-Saltoratto, Ana Lúcia ; Mello, Stephano Spanó ; Oliveira, Rene D. R. ; Rassi, Diane Meyre ; Giuliatti, Silvana ; Sakamoto-Hojo, Elza Tiemi ; Louzada-Junior, Paulo ; Donadi, Eduardo Antonio ; Passos, Geraldo A. S.. Differential gene expression of peripheral blood mononuclear cells from rheumatoid arthritis patients may discriminate immunogenetic, pathogenic and treatment features. Immunology (Oxford. Print). v. 127, p. 365-372, 2009. Qualis: Não identificado (PRINT))
42.	KOFLER, R. ; Teixeira Torres, Tatiana ; LELLEY, T. ; SCHLÖTTERER, C.. PanGEA: Identification of allele specific gene expression using the 454 technology. BMC Bioinformatics. v. 10, p. 143, 2009. Qualis: A1
43.	KOIDE, T.; Pang, W.L. ; Baliga, N.S.. The role of predictive modeling in rationally reengeneering biological systems. Nature Review, Microbiology. v. 7, p. 297-305, 2009. Qualis: A1
44.	KOIDE, T.; Reiss, D.J. ; Bare, J.C. ; Pang, W.L. ; Facciotti, M.T. ; Schmid, A.K. ; Pan, M. ; Marzolf, B. ; Van, P.T. ; LO, F. ; PRATAP, A. ; DEUTSCH, E. W. ; PETERSON, A. ; MARTIN, D. ; Baliga, N.S.. Prevalence of transcription promoters within archaeal operons and coding sequences. Molecular Systems Biology. v. 5, p. 285, 2009. Qualis: Não identificado (MOLECULAR SYSTEMS BIOLOGY)
45.	LAM, ERIC ; SHINE, JAMES ; DA SILVA, JORGE ; LAWTON, MICHAEL ; BONOS, STACY ; CALVINO, MARTIN ; CARRER, HELAINE ; SILVA-FILHO, MARCIO C. ; GLYNN, NEIL ; HELSEL, ZANE ; MA, JIONG ; RICHARD, EDWARD ; SOUZA, GLAUCIA MENDES ; MING, RAY. Improving sugarcane for biofuel: engineering for an even better feedstock. Global Change Biology. Bioenergy. v. 1, p. 251-255, 2009. Qualis: Não identificado (BIOENERGY)
46.	LIMA, W. C. ; Varani, A. M. ; Menck, C. F.M.. NAD Biosynthesis Evolution in Bacteria: Lateral Gene Transfer of Kynurenine Pathway in Xanthomonadales and Flavobacteriales. Molecular Biology and Evolution. v. 26, p. 399-406, 2009. Qualis: A1
47.	Lima-Bessa, K. M. ; SOLTYS, DT ; Marchetto, M. C. N. ; MENCK CF. Xeroderma pigmentosum: living in the dark but with hope in therapy. Drugs of the Future. v. 34, p. 665-672, 2009.Qualis: Não identificado (DRUGS OF THE FUTURE)
48.	LOURO, R. ; SMIRNOVA, A. S. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Long intronic noncoding RNA transcription: Expression noise or expression choice?. Genomics (San Diego). v. 93, p. 291-298, 2009. Qualis: A3
49.	Manetti, M. E. ; ROSSI, M. ; NAKABASHI, M. ; GRANDBASTIEN, M. A. ; Sluys, Marie Anne. The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species. Molecular Genetics and Genomics. v. 281, p. 261-271, 2009. Qualis: A4
50.	MARQUES, L. M. ; BUZINHANI, M. ; Neto, R. L. ; OLIVEIRA, R. C. ; YAMAGUTI, M. ; GUIMARAES, A. M. S. ; TIMENETSKY, J.. Detection of Ureaplasma diversum in bovine semen straws for artificial insemination. Veterinary Record. v. 165, p. 572-573, 2009. Qualis: A1
51.	Mello, B. P. ; Abrantes, E. F. ; Torres, C. H. ; MACHADO-LIMA, A. ; Fonseca, R. d. S. ; CARRARO, D. M. ; BRENTANI, R. R. ; Reis, L. F. L. ; Brentani, H.. No-match ORESTES explored as tumor markers. Nucleic Acids Research. v. 37, p. 2607-2617, 2009. Qualis: A1
52.	Meola, Juliana ; Dentillo, Daniel Blassioli ; Rosa e Silva, Júlio César ; Ferriani, Rui Alberto ; Veiga, Luciana Caricati ; Paro de Paz, Claudia Cristina ; Giuliatti, Silvana ; Martelli, Lúcia. Glycodelin expression in the endometrium of healthy women and in the eutopic and ectopic endometrium of women with endometriosis. Fertility and Sterility. v. 91, p. 1676-1680, 2009. Qualis: A1
53.	Oliveira, Katia C. ; Carvalho, Mariana L. P. ; Venancio, Thiago M. ; Miyasato, Patricia A. ; KAWANO, Toshie ; DEMARCO, Ricardo ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Identification of the Schistosoma mansoni TNF-Alpha Receptor Gene and the Effect of Human TNF-Alpha on the Parasite Gene Expression Profile. Plos Neglected Tropical Diseases. v. 3, p. e556, 2009. Qualis: A1
54.	Orjuela-Sanchez, P. ; de Santana Filho, F. S. ; MACHADO-LIMA, A. ; CHECHUAN, Y. ; Costa, M. R. F. ; Alecrim, M. d. G. C. ; del Portillo, H.A.. Analysis of single-nucleotide polymorphisms in the crt-o and mdr1 genes of Plasmodium vivax among chloroquine resistant isolates from the Brazilian Amazon region. Antimicrobial Agents and Chemotherapy. v. 53, p. 3561-3564, 2009. Qualis: A1
55.	Papini-Terzi, Flavia S ; Rocha, Flavia R ; Vencio, Ricardo ZN ; Felix, Juliana M ; Branco, Diana S ; Waclawovsky, Alessandro J ; Del Bem, Luiz EV ; Lembke, Carolina G ; Costa, Maximiller DL ; Nishiyama, Milton Y ; Vicentini, Renato ; Vincentz, Michel GA ; Ulian, Eugenio C ; Menossi, Marcelo ; SOUZA, G. M.. Sugarcane genes associated with sucrose content. BMC Genomics. v. 10, p. 120, 2009. Qualis: A2
56.	Perpetuo, Elen Aquino ; Marques, Regina Célia Pereira ; Mendes, Maria Anita ; Lima, Wanessa Cristina ; Menck, Carlos Frederico Martins ; Nascimento, Claudio Augusto Oller do. Characterization of the phenol monooxygenase gene from Chromobacterium violaceum: Potential use for phenol biodegradation. Biotechnology and Bioprocess Engineering. v. 14, p. 694-701, 2009. Qualis: B1
57.	Quiapim, A. C. ; BRITO, M. S. ; Bernardes, L. A.S. ; daSilva, I. ; MALAVAZI, I. ; DEPAOLI, H. C. ; MOLFETTA-MACHADO, J. B. ; Giuliatti, S. ; GOLDMAN, G. H. ; GOLDMAN, M. H. S.. Analysis of the Nicotiana tabacum Stigma/Style Transcriptome Reveals Gene Expression Differences between Wet and Dry Stigma Species. Plant Physiology (Bethesda). v. 149, p. 1211-1230, 2009. Qualis: A1
58.	RODRIGUES, R.A. ; AZEREDO-ESPIN, A.M.L. ; TORRES, T.T.. Microsatellite markers for population genetic studies of the blowfly Chrysomya putoria (Diptera: Calliphoridae). Memórias do Instituto Oswaldo Cruz (Impresso). v. 104, p. 1047-1050, 2009. Qualis: A2
59.	Santos, Ramon F. ; Pôssa, Marcela A. S. ; Bastos, Matheus S. ; Guedes, Paulo M. M. ; Almeida, Márcia R. ; DEMARCO, Ricardo ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Bahia, Maria T. ; Fietto, Juliana L. R.. Influence of Ecto-Nucleoside Triphosphate Diphosphohydrolase Activity on Trypanosoma cruzi Infectivity and Virulence. PLoS Neglected Tropical Diseases (Online). v. 3, p. e387, 2009. Qualis: A1
60.	Sato, J. R. ; Takahashi, D. Y. ; Arcuri, S. M. ; Sameshima, Koichi ; Morettin, P. A. ; Baccalá, L. A.. Frequency domain connectivity identification: An application of partial directed coherence in fMRI. Human Brain Mapping. v. 30, p. 452-461, 2009. Qualis: A1
61.	SATO, João Ricardo ; Fujita, André ; Thomaz, Carlos Eduardo ; Martin, Maria da Graça Morais ; Mourão-Miranda, Janaina ; Brammer, Michael John ; Junior, Edson Amaro. Evaluating SVM and MLDA in the extraction of discriminant regions for mental state prediction. NeuroImage (Orlando). v. 46, p. 105-114, 2009. Qualis: A1
62.	Schmid, A.K. ; Reiss, D.J. ; Pan, M. ; KOIDE, T. ; Baliga, N.S.. A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability. Molecular Systems Biology. v. 5, p. 282, 2009. Qualis: Não identificado (MOLECULAR SYSTEMS BIOLOGY)
63.	SCHUCH, A. ; GALHARDO, R. ; LIMA-BESSA, K. ; Schuch, NJ ; MENCK CF. Development of a DNA-dosimeter system for monitoring the effects of solar-ultraviolet radiation. Photochemical & Photobiological Sciences. v. 8, p. 111, 2009. Qualis: A3
64.	Secco, Mariane ; Moreira, Yuri B. ; Zucconi, Eder ; Vieira, Natassia M. ; Jazedje, Tatiana ; Muotri, Alysson R. ; Okamoto, Oswaldo K. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Zatz, Mayana. Gene Expression Profile of Mesenchymal Stem Cells from Paired Umbilical Cord Units: Cord is Different from Blood. Stem Cell Reviews. v. 5, p. 387-401, 2009. Qualis: A3
65.	SETUBAL, J. C.; dos Santos, P. ; Goldman, B. S. ; Ertesvag, H. ; Espin, G. ; Rubio, L. M. ; Valla, S. ; Almeida, N. F. ; Balasubramanian, D. ; Cromes, L. ; Curatti, L. ; Du, Z. ; Godsy, E. ; GOODNER, B. ; Hellner-Burris, K. ; Hernandez, J. A. ; Houmiel, K. ; Imperial, J. ; Kennedy, C. ; Larson, T. J.. Genome Sequence of Azotobacter vinelandii, an Obligate Aerobe Specialized To Support Diverse Anaerobic Metabolic Processes. Journal of Bacteriology (Print). v. 191, p. 4534-4545, 2009. Qualis: A3
66.	Shimamura, T. ; Imoto, S. ; Yamaguchi, Rui ; FUJITA, A ; Nagasaki, M. ; Miyano, Satoru. Recursive regularization for inferring gene networks from time-course gene expression profiles. BMC Systems Biology. v. 3, p. 41, 2009. Qualis: A1
67.	Slater, S. C. ; Goldman, B. S. ; GOODNER, B. ; SETUBAL, J. C. ; Farrand, S. K. ; NESTER, E. W. ; Burr, T. J. ; Banta, L. ; Dickerman, A. W. ; Paulsen, I. ; OTTEN, L. ; Suen, G. ; Welch, R. ; Almeida, N. F. ; Arnold, F. ; Burton, O. T. ; Du, Z. ; Ewing, A. ; Godsy, E. ; Heisel, S.. Genome Sequences of Three Agrobacterium Biovars Help Elucidate the Evolution of Multichromosome Genomes in Bacteria. Journal of Bacteriology (Print). v. 191, p. 2501-2511, 2009. Qualis: A3
68.	TORRES, T. T.; AZEREDO-ESPIN, A.M.L.. Population genetics of New World screwworm from the Caribbean: insights from microsatellite data. Medical and Veterinary Entomology. v. 23, p. 23-31, 2009. Qualis: A2
69.	TORRES, T. T.; DOLEZAL, M. ; SCHLÖTTERER, C. ; OTTENWÄLDER, B.. Expression profiling of Drosophila mitochondrial genes via deep mRNA sequencing. Nucleic Acids Research. v. 37, p. 7509-7518, 2009. Qualis: A1
70.	Tseng, Tsai-Tien ; Tyler, Brett M ; Setubal, João C. Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology. BMC Microbiology (Online). v. 9, p. S2, 2009. Qualis: A2
71.	VENANCIO, Thiago M ; Cristofoletti, P. T. ; Ferreira, C. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Terra, W. R.. The Aedes aegypti larval transcriptome: a comparative perspective with emphasis on trypsins and the domain structure of peritrophins. Insect Molecular Biology. v. 18, p. 33-44, 2009. Qualis: A1
72.	VIBRANOVSKI, M. D.; LOPES, H. F. ; KARR, T. L. ; LONG, M.. Stage-Specific Expression Profiling of Drosophila Spermatogenesis Suggests that Meiotic Sex Chromosome Inactivation Drives Genomic Relocation of Testis-Expressed Genes. PLOS Genetics (Online). v. 5, p. e1000731, 2009. Qualis: A1
73.	VIBRANOVSKI, M. D.; ZHANG, Y. ; LONG, M.. General gene movement off the X chromosome in the Drosophila genus. Genome Research. v. 19, p. 897-903, 2009. Qualis: A1
74.	Vieira, Rafael F.C. ; Molento, Marcelo B. ; dos Santos, Leonilda C. ; Moraes, Wanderlei ; Cubas, Zalmir S. ; Santos, Andrea P. ; Guimaraes, Ana M.S. ; Mohamed, Ahmed ; Barros Filho, Ivan R. ; Biondo, Alexander W.. Detection of a novel hemoplasma based on 16S rRNA gene DNA in captive and free-ranging capybaras (Hydrochaeris hydrochaeris). Veterinary Microbiology (Amsterdam. Print). v. 139, p. 410-413, 2009. Qualis: Não identificado (PRINT))
75.	Warren, Andrew S ; Setubal, João. The Genome Reverse Compiler: an explorative annotation tool. BMC Bioinformatics. v. 10, p. 35, 2009. Qualis: A1
76.	Wattam, A. R. ; Williams, K. P. ; Snyder, E. E. ; Almeida, N. F. ; Shukla, M. ; Dickerman, A. W. ; Crasta, O. R. ; Kenyon, R. ; Lu, J. ; Shallom, J. M. ; Yoo, H. ; Ficht, T. A. ; Tsolis, R. M. ; Munk, C. ; Tapia, R. ; Han, C. S. ; Detter, J. C. ; Bruce, D. ; Brettin, T. S. ; SETUBAL, J. C.. Analysis of Ten Brucella Genomes Reveals Evidence for Horizontal Gene Transfer Despite a Preferred Intracellular Lifestyle. Journal of Bacteriology (Print). v. 191, p. 3569-3579, 2009. Qualis: A3

2008

1.	Bermudez, L. ; Urias, U. ; Milstein, D. ; Kamenetzky, L. ; Asis, R. ; Fernie, A. R. ; VAN SLUYS, M A ; Carrari, F. ; ROSSI, M.. A candidate gene survey of quantitative trait loci affecting chemical composition in tomato fruit. Journal of Experimental Botany. v. 59, p. 2875-2890, 2008. Qualis: A1
2.	Brandao, A. D. ; Del Bem, L. E. V. ; Vincentz, M. ; BUCKERIDGE, M. S.. Expression pattern of four storage xyloglucan mobilization-related genes during seedling development of the rain forest tree Hymenaea courbaril L.. Journal of Experimental Botany. v. 60, p. 1191-1206, 2008. Qualis: A1
3.	Brito, Glauber Costa ; Fachel, Ângela A. ; Vettore, Andre Luiz ; VIGNAL, Giselle M ; Gimba, Etel R.P. ; Campos, Franz S. ; Barcinski, Marcello A. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Reis, Eduardo M.. Identification of protein-coding and intronic noncoding RNAs down-regulated in clear cell renal carcinoma. Molecular Carcinogenesis,. v. 47, p. 757-767, 2008. Qualis: A3 (MOLECULAR CARCINOGENESIS)
4.	CAMPOS, Patrícia Danieli ; ALVARENGA, Kátia de Freitas ; FREDERIGUE, Natália Barreto ; NASCIMENTO, Leandra Tabanez Do ; Sameshima, K. ; Costa Filho, Orozimbo Alves ; COSTA, O. A. ; Bevilacqua, Maria Cecília. Habilidades de ordenação temporal em usuários de implante coclear multicanal. Revista Brasileira de Otorrinolaringologia (Impresso). v. 74, p. 884-889, 2008. Qualis: Não identificado (REVISTA BRASILEIRA DE OTORRINOLARINGOLOGIA)
5.	CARDOSO, F. C. ; Gilson C. Macedo ; Elisandra Gava ; Gregory T. Kitten ; Vitor L. Mati ; Alan L. de Melo ; Marcelo V. Caliari ; Giulliana T. Almeida ; Thiago M. Venancio ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; Sergio C. Oliveira. Schistosoma mansoni Tegument Protein Sm29 Is Able to Induce a Th1-Type of Immune Response and Protection against Parasite Infection. PLoS Neglected Tropical Diseases (Online). v. 2, p. e308, 2008. Qualis: A1
6.	CARVALHO, H. ; ORTOLAN, T. G. ; PAULA, T. ; LEITE, R. A. ; WEINLICH, R. ; AMARANTES-MENDES, G. ; MENCK CF. Sustained activation of p53 in confluent nucleotide excision repair-deficient cells resistant to ultraviolet-induced apoptosis.. DNA Repair. v. 7, p. 922-931, 2008. Qualis: A1
7.	CARVALHO, Sidney Jurado de ; FENLEY, Marcia de Oliveira ; da Silva, Fernando Lui?s Barroso. Protein−Ion Binding Process on Finite Macromolecular Concentration. A Poisson−Boltzmann and Monte Carlo Study. Journal of Physical Chemistry B. v. 112, p. 16766-16776, 2008. Qualis: A2
8.	CASTRO, N. P. ; OSÓRIO, C. A. B. T. ; TORRES, C. H. ; BASTOS, E. P. ; MOURÃO NETO, M. ; SOARES, F. A. ; BRENTANI. HP ; CARRARO, D. M.. Evidence that molecular changes in cells occur before morphological alterations during the progression of breast ductal carcinoma. Breast Cancer Research. v. 10, p. R85, 2008. Qualis: A1
9.	Charchat-Fichman, H. ; Nitrini, R. ; Caramelli, P. ; Sameshima, K.. A new brief computerized cognitive screening battery (CompCogs) for early diagnosis of Alzheimer´s disease. Dementia & Neuropsychologia. v. 2, p. 13-19, 2008.Qualis: B3
10.	CHIGANCAS, V. ; Lima-Bessa, K. M. ; STARY, A. ; Menck, C. F.M. ; SARASIN, A.. Defective Transcription/Repair Factor IIH Recruitment to Specific UV Lesions in Trichothiodystrophy Syndrome. Cancer Research. v. 68, p. 6074-6083, 2008. Qualis: A1
11.	COSTA, R. M. A. ; QUAYLE, C. ; JACYSYN, J. ; AMARANTES-MENDES, G. ; SARASIN, A. ; MENCK CF. Resistance to ultraviolet-induced apoptosis in DNA repair deficient growth arrested human fibroblasts is not related to recovery from RNA transcription blockage. Mutation Research. Fundamental and Molecular Mechanisms of Mutagenesis. v. 640, p. 1-7, 2008. Qualis: Não identificado (FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS)
12.	da Silva, F.C. ; Diaz-Ambrona, C.G.H. ; BUCKERIDGE, M. S. ; SOUZA, A. P. ; De Souza, Amanda Pereira ; Barbieri, V. ; Dourado Neto, D.. Sugarcane and Climate Change: effects of CO2 on potential growth and development. Acta Horticulturae. v. 802, p. 331-336, 2008. Qualis: B4
13.	de Mello Varani, Alessandro ; Souza, Rangel Celso ; Nakaya, Helder I. ; de Lima, Wanessa Cristina ; Paula de Almeida, Luiz Gonzaga ; Kitajima, Elliot Watanabe ; Chen, Jianchi ; Civerolo, Edwin ; Vasconcelos, Ana Tereza Ribeiro ; Van Sluys, Marie-Anne. Origins of the Xylella fastidiosa Prophage-Like Regions and Their Impact in Genome Differentiation. Plos One. v. 3, p. e4059, 2008. Qualis: A1
14.	de Souza, R. F.; Anantharaman, V. ; de Souza, S. J. ; Aravind, L. ; Gueiros-Filho, F. J.. AMIN domains have a predicted role in localization of diverse periplasmic protein complexes. Bioinformatics (Oxford). v. 24, p. 2423-2426, 2008. Qualis: A1
15.	Dhivya Arasappan ; Aurelien Mazurie ; Alves, J. M. ; Danail Bonchev ; BUCK, G. A.. Path-a-Way: A Strategy for Network Analysis of Microarray Data. IEEE Transactions on Biomedical Engineering (Print). v. 1, p. 432-436, 2008.Qualis: A1
16.	DURHAM, A. M.; Chimara, E. ; FERRAZOLI, L. ; UEKY, S. Y. M. ; MARTINS, M. C. ; ARBEIT, R. D. ; LEAO, S. C.. Reliable identification of mycobacterial species by PCR-restriction enzyme analysis (PRA)-hsp65 in a reference laboratory and elaboration of a sequence-based extended algorithm of PRA-hsp65 patterns. BMC Microbiology (Online). v. 8, p. 48, 2008. Qualis: A2
17.	DURHAM, A. M.; LIMA, K. ; VIANA-NIERO, C. ; da Silva RABELLO, M. C. ; L.R.MARSOLA, ; LEAO, S. C.. Molecular Characterization of Mycobacterium massiliense and Mycobacterium bolletii in Isolates Collected from Outbreaks of Infections after Laparoscopic Surgeries and Cosmetic Procedures. Journal of Clinical Microbiology (Print). v. 46, p. 850-855, 2008. Qualis: A2
18.	FUJITA, A.; SATO, João Ricardo ; FESTA, Fernanda ; GOMES, L. R. ; SHINJO, Sueli Mieko Oba ; MARIE, Suely Kazue Nagahashi ; FERREIRA, Carlos Eduardo ; SOGAYAR, Mari Cleide. Identification of Col6a1 as a differentially expressed gene in human astrocytomas. Genetics and Molecular Research. v. 7, p. 371-378, 2008.Qualis: B3
19.	Fujita, Andre; Gomes, Luciana R ; Sato, Joao R ; Yamaguchi, Rui ; Thomaz, Carlos E ; Sogayar, Mari C ; Miyano, Satoru. Multivariate gene expression analysis reveals functional connectivity changes between normal/tumoral prostates. BMC Systems Biology. v. 2, p. 106, 2008. Qualis: A1
20.	Fujita, André; SATO, João Ricardo ; GARAY-MALPARTIDA, HUMBERTO MIGUEL ; SOGAYAR, Mari Cleide ; FERREIRA, Carlos Eduardo ; Miyano, Satoru. MODELING NONLINEAR GENE REGULATORY NETWORKS FROM TIME SERIES GENE EXPRESSION DATA. Journal of Bioinformatics and Computational Biology (Print). v. 06, p. 961, 2008. Qualis: B1
21.	Gillespie, Joseph J. ; Williams, Kelly ; Shukla, Maulik ; Snyder, Eric E. ; Nordberg, Eric K. ; Ceraul, Shane M. ; Dharmanolla, Chitti ; Rainey, Daphne ; Soneja, Jeetendra ; Shallom, Joshua M. ; Vishnubhat, Nataraj Dongre ; Wattam, Rebecca ; Purkayastha, Anjan ; Czar, Michael ; Crasta, Oswald ; SETUBAL, J. C. ; Azad, Abdu F. ; Sobral, Bruno S.. Rickettsia Phylogenomics: Unwinding the Intricacies of Obligate Intracellular Life. Plos One. v. 3, p. e2018, 2008. Qualis: A1
22.	GIULIATTI, S.; BRAUN, G. H. ; JORGE, D. M. M. ; RAMOS, H. P. ; ALVES, R. M. ; SILVA, V. B. ; VILELA, S. ; TAFT, C. A. ; SILVA, C. H. T. P.. Molecular Dynamics, Flexible Docking, Virtual Screening, ADMET Predictions, and Molecular Interaction Field Studies to Design Novel Potential MAO-B Inhibitors. Journal of Biomolecular Structure & Dynamics. v. 25, p. 347-355, 2008. Qualis: A3
23.	Gonzalez-Kristeller, D.C. ; FARAGE, L. ; FIORINI, L.C. ; LOOMIS, W. F. ; DASILVA, A.M.. The P450 oxidoreductase, RedA, controls development beyond the mound stage in Dictyostelium discoideum. BMC Developmental Biology (Online). v. 8, p. 1-10, 2008. Qualis: B1
24.	GUIMARAES, A. M. S.; ALTHAUS, Lilian Karenina ; TULLIO, D. ; DECONTO, Ivan ; SILVA, A. W. ; FERRARI, Marcus Vinícius ; BIONDO, A. W. ; ALBERTON, Geraldo Camilo. Laminitis in culled sows from commercial swine farms of Southern Brazil. Archives of Veterinary Science. v. 13, p. 140-144, 2008.Qualis: B2
25.	Hatanaka, Y. ; Nagasaki, M. ; Yamaguchi, Rui ; Obayashi, T. ; Numata, K. ; FUJITA, A. ; Shimamura, T. ; Tamada, Y. ; Imoto, S. ; Kinoshita, K. ; Nakai, K. ; Miyano, Satoru. A novel strategy to search conserved transcriptional factor binding sites among coexpressing genes in human. Genome Informatics. v. 20, p. 212-221, 2008.Qualis: Não identificado (GENOME INFORMATICS)
26.	HOUNIE, A ; CAPPI, C ; CORDEIRO, Q ; SAMPAIO, A ; MORAES, I ; ROSARIO, M ; PALACIOS, S ; GOLDBERG, A ; VALLADA, H ; MACHADO-LIMA, A. ; NAKANO, E. ; KALIL, J. ; PAULS, D. ; PEREIRA, C. A. B. ; GUILHERME, L. ; MIGUEL, E. C.. TNF-alpha polymorphisms are associated with obsessive-compulsive disorder. Neuroscience Letters. v. 442, p. 86-90, 2008. Qualis: A4
27.	Igreja, C ; CAIADO, F. ; CLODE, N. ; HENRIQUES, A. ; CAMARGO, Lauren ; REIS, EM ; DIAS, S.. Detailed molecular characterization of cord blood¿derived endothelial progenitors. Experimental Hematology. v. 36, p. 193.e1-193.e15, 2008. Qualis: A3
28.	Kojima K ; FUJITA, A. ; Shimamura, T. ; Imoto, S. ; Miyano, Satoru. Estimation of nonlinear gene regulatory networks via L1 regularized NVAR from time series gene expression data. Genome Informatics. v. 20, p. 37-51, 2008.Qualis: Não identificado (GENOME INFORMATICS)
29.	Leite, Ricardo A ; Marchetto, Maria C ; Muotri, Alysson R ; de Moraes Vasconcelos, Dewton ; Prado de Oliveira, Zilda N ; Rivitti Machado, Maria C ; Martins Menck, Carlos F. Identification of XP Complementation Groups by Recombinant Adenovirus Carrying DNA Repair Genes. Journal of Investigative Dermatology. v. 129, p. 502-506, 2008. Qualis: A1
30.	LIMA, W. ; PAQUOLA, A. C. ; VARANI, A. M. ; VANSLUYS MA ; MENCK, C. F. M.. Laterally transferred genomic islands in Xanthomonadales related to pathogenicity and primary metabolism.. FEMS Microbiology Letters. v. 281, p. 87-97, 2008. Qualis: B2
31.	LIMA, W. C. ; MENCK CF. Replacement of the Arginine Biosynthesis Operon in Xanthomonadales by Lateral Gene Transfer. Journal of Molecular Evolution. v. 66, p. 266-275, 2008. Qualis: A3
32.	LIMA-BESSA, K. ; ARMELINI, M. ; CHIGANCAS, V. ; JACYSYN, J. ; AMARANTES-MENDES, G. ; SARASIN, A. ; MENCK CF. CPDs and 6-4PPs play different roles in UV-induced cell death in normal and NER-deficient human cells. DNA Repair. v. 7, p. 303-312, 2008. Qualis: A1
33.	LOURO, R ; ELJUNDI, T ; NAKAYA, H ; REIS, E ; VERJOVSKIALMEIDA, S ; Verjovski-Almeida, S.. Conserved tissue expression signatures of intronic noncoding RNAs transcribed from human and mouse loci. Genomics (San Diego). v. 92, p. 18-25, 2008. Qualis: A3
34.	Lu, Hong ; Patil, Prabhu ; Van Sluys, Marie-Anne ; White, Frank F. ; Ryan, Robert P. ; Dow, J. Maxwell ; Rabinowicz, Pablo ; Salzberg, Steven L. ; Leach, Jan E. ; Sonti, Ramesh ; Brendel, Volker ; Bogdanove, Adam J.. Acquisition and Evolution of Plant Pathogenesis¿Associated Gene Clusters and Candidate Determinants of Tissue-Specificity in Xanthomonas. . v. 3, p. e3828, 2008. Qualis: Não identificado ()
35.	MACHADO-LIMA, A.; del Portillo, H.A. ; DURHAM, A.M.. Computational methods in noncoding RNA research. Journal of Mathematical Biology. v. 56, p. 15-49, 2008. Qualis: A4
36.	MARTINS, D. C. ; BRAGA-NETO, U. ; BITTNER, M. L. ; HASHIMOTO, R. F. ; DOUGHERTY, E. R.. Intrinsically Multivariate Predictive Genes. IEEE Journal of Selected Topics in Signal Processing. v. 2, p. 424-439, 2008. Qualis: A1
37.	MASCHIETTO, M. ; DE CAMARGO, B. ; BRENTANI. HP ; GRUNDY, P. ; SREDNI, S. T. ; TORRES, C. H. ; MOTA, L. D. ; CUNHA, I. W. ; PATRÃO, D. F. C. ; COSTA, C. M. L. ; SOARES, F. A. ; BRENTANI, R. R. ; CARRARO, D. M.. Molecular profiling of isolated histological components of wilms tumor implicates a common role for the Wnt signaling pathway in kidney and tumor development. Oncology (Basel). v. 75, p. 81-91, 2008. Qualis: A4
38.	MENOSSI, M. ; SILVA-FILHO, M. C. ; Vincentz, M. ; Van-Sluys, M.-A. ; Souza, G. M.. Sugarcane Functional Genomics: Gene Discovery for Agronomic Trait Development. International Journal of Plant Genomics (Print). v. 2008, p. 458732, 2008. Qualis: A2 (INTERNATIONAL JOURNAL OF GENOMICS)
39.	OLIVEIRA, G ; FRANCO, G ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. The Brazilian contribution to the study of the Schistosoma mansoni transcriptome. Acta Tropica. v. 108, p. 179-182, 2008. Qualis: A1
40.	Oliveira. C.M. ; PEREIRA, A. C. ; de Andrade, M. ; SOLER, J. M. P. ; KRIEGER, J. E.. Heritability of cardiovascular risk factors in a Brazilian population: Baependi Heart Study. BMC Medical Genetics. v. 32, p. 1-8, 2008. Qualis: A4
41.	Papini-Terzi F. S. ; FELIX, J. M. ; ROCHA, F. R. ; Waclawovsky AJ ; ULIAN, E. C. ; Chabregas S ; Falco MC ; Nishiyama-Junior, M. Y. ; VENCIO, R. Z. N. ; VICENTINI, R. ; MENOSSI, M. ; SOUZA, G. M.. The SUCEST-FUN project: identifying genes that regulate sucrose content in sugarcane. Sugar Cane International. v. 26, p. 25-29, 2008.Qualis: Não identificado (SUGAR CANE INTERNATIONAL)
42.	Pires dos Santos, Andrea ; SANTOS, R. P. ; BIONDO, A. W. ; DORA, J. M. ; GOLDANI, L. Z. ; OLIVEIRA, S. T. ; GUIMARAES, A. M. S. ; TIMENETSKY, J. ; de Morais, H. A. ; GONZALEZ, F. H. D. ; MESSICK, J. B.. Hemoplasma Infection in HIV-positive Patient, Brazil. Emerging Infectious Diseases (Print). v. 14, p. 1922-1924, 2008. Qualis: A1
43.	Querec, Troy D ; Akondy, Rama S ; Lee, Eva K ; Cao, Weiping ; Nakaya, Helder I ; Teuwen, Dirk ; Pirani, Ali ; Gernert, Kim ; Deng, Jiusheng ; Marzolf, Bruz ; Kennedy, Kathleen ; Wu, Haiyan ; Bennouna, Soumaya ; Oluoch, Herold ; Miller, Joseph ; Vencio, Ricardo Z ; Mulligan, Mark ; Aderem, Alan ; Ahmed, Rafi ; Pulendran, Bali. Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans. Nature Immunology. v. 10, p. 116-125, 2008. Qualis: A1
44.	RAM, Rossetti ; JCC, Lorenzi ; S, Giuliatti ; CL, Silva ; AAM, Coelho-Castelo. In Silico Prediction of the Tertiary Structure of M. leprae Hsp65 Protein Shows an Unusual Structure in Carboxy-terminal Region. Journal of Computer Science and Systems Biology (Online). v. 01, p. 126-131, 2008. Qualis: Não identificado (LEPRAE HSP65 PROTEIN SHOWS AN UNUSUAL STRUCTURE IN CARBOXY-TERMINAL REGION. JOURNAL OF COMPUTER SCIENCE AND SYSTEMS BIOLOGY)
45.	RINCONES, J. ; SCARPARI, L. M. ; CARAZZOLLE, M. F. ; MONDENGO, J. M. C. ; FORMIGHIERI, E. F. ; Barau, J. G. ; COSTA, G. G. L. ; CARRARO, D. M. ; Brentani, Helena P. ; VILAS-BOAS, L. A. ; OLIVEIRA, B. V. ; SABHA, M. ; DIAS, R. ; CASCARDO, J. M. ; AZEVEDO, R. A. ; MEINHARDT, L. W. ; PEREIRA, G. A. G.. Differential Gene Expression Between the Biotrophic-Like and Saprotrophic Mycelia of the Witches' Broom Pathogen. Molecular Plant-Microbe Interactions. v. 21, p. 891-908, 2008. Qualis: A1
46.	ROCHA, R. ; PAQUOLA, A. ; MARQUES, M. ; MENCK CF ; GALHARDO, R.. Characterization of the SOS regulon of Caulobacter crescentus. Journal of Bacteriology. v. 190, p. 1209-1218, 2008. Qualis: A3
47.	Rodrigues, P. A. L. ; Sameshima, Koichi ; Zaidan, E.. Perfil de desempenho em teste de triagem de processamento auditivo (SCAN) em crianças de sete e oito anos residentes em Cuiabá. Revista da Sociedade Brasileira de Fonoaudiologia. v. 13, p. 173-178, 2008. Qualis: Não identificado (REVISTA DA SOCIEDADE BRASILEIRA DE FONOAUDIOLOGIA)
48.	ROSA, A.C. ; LESSINGER, A.C. ; AZEREDO-ESPIN, A.M.L. ; TORRES, T.T.. Isolation and characterization of polymorphic microsatellite loci for the horn fly, Haematobia irritans (L.) (Diptera: Muscidae). Molecular Ecology Notes. v. 8, p. 971-973, 2008. Qualis: Não identificado (MOLECULAR ECOLOGY NOTES)
49.	Salem-Izacc, S. M. ; KOIDE, T. ; Vencio, R. Z. N. ; Gomes, S. L.. Global Gene Expression Analysis during Germination in the Chytridiomycete Blastocladiella emersonii. Eukaryotic Cell. v. 8, p. 170-180, 2008. Qualis: Não identificado (EUKARYOTIC CELL)
50.	Salzberg, Steven L ; Sommer, Daniel D ; Schatz, Michael C ; Phillippy, Adam M ; Rabinowicz, Pablo D ; Tsuge, Seiji ; Furutani, Ayako ; Ochiai, Hirokazu ; Delcher, Arthur L ; Kelley, David ; Madupu, Ramana ; Puiu, Daniela ; Radune, Diana ; Shumway, Martin ; Trapnell, Cole ; Aparna, Gudlur ; Jha, Gopaljee ; Pandey, Alok ; Patil, Prabhu B ; SLUYS MAV.. Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A. BMC Genomics. v. 9, p. 204, 2008. Qualis: A2
51.	Santos, L. M. ; Dzirasa, K. ; Kubo, R. ; Silva, M. T. A. ; Ribeiro, S. ; Sameshima, Koichi ; Valle, A. C. ; Timo-Iaria, C.. Baseline hippocampal theta oscillation speeds correlate with rate of operant task acquisition. Behavioural Brain Research. v. 190, p. 152-155, 2008. Qualis: A2
52.	SATO, J ; THOMAZ, C ; CARDOSO, E ; FUJITA, A ; MARTIN, M ; AMAROJR, E. Hyperplane navigation: A method to set individual scores in fMRI group datasets. NeuroImage (Orlando). v. 42, p. 1473-1480, 2008. Qualis: A1
53.	SATO, João Ricardo ; da Graça Morais Martin, Maria ; Fujita, André ; Mourão-Miranda, Janaina ; Brammer, Michael John ; Amaro, Edson. An fMRI normative database for connectivity networks using one-class support vector machines. Human Brain Mapping. v. 30, p. 1068-1076, 2008. Qualis: A1
54.	Serafini, C. A. V. ; ROSA, G. A. ; GUIMARAES, A. M. S. ; de Morais, H. A. ; BIONDO, A. W.. Survey of Owned Feline and Canine Populations in Apartments from a Neighbourhood in Curitiba, Brazil. Zoonoses and Public Health (Print). v. 55, p. 402-405, 2008. Qualis: A1
55.	Silveira, Nelson JF ; Varuzza, Leonardo ; MACHADO-LIMA, A. ; Lauretto, Marcelo S ; Pinheiro, Daniel G ; Rodrigues, Rodrigo V ; SEVERINO, PATRÍCIA ; Nobrega, Francisco G ; Silva Jr, WA ; de B Pereira, Carlos A ; Tajara, Eloiza H. Searching for molecular markers in head and neck squamous cell carcinomas (HNSCC) by statistical and bioinformatic analysis of larynx-derived SAGE libraries. BMC Medical Genomics. v. 1, p. 56, 2008. Qualis: A3
56.	SOBRAL, R. A. ; HONDA, S. T. ; KATAYAMA, M. L. H. ; BRENTANI. HP ; BRENTANI, M. M. ; PATRÃO, D. F. C. ; FOLGUEIRA, M. A. A. K.. Tumor slices as a model to evaluate doxorubicin in vitro treatment and expression of trios of genes PRSS11, MTSS1, CLPTM1 and PRSS11, MTSS1, SMYD2 in canine mammary gland cancer. Acta Veterinaria Scandinavica. v. 50, p. 27, 2008. Qualis: A2
57.	SOUZA, A. P. ; Gaspar M. ; Emerson Alves Silva ; Eugênio Cesar Ulian ; Alessandro Jaquiel Waclawovsky ; MILTON YUTAKA NISHIYAMA-JR ; Renato Vicentini dos Santos ; Marcelo Menossi Teixeira ; Glaucia Mendes Souza ; BUCKERIDGE, M. S.. Elevated CO 2 increases photosynthesis, biomass and productivity, and modifies gene expression in sugarcane. Plant, Cell and Environment. v. 31, p. 1116-1127, 2008. Qualis: A1
58.	Takahashi, D. Y. ; Baccalá, L. A. ; Sameshima, K.. Partial directed coherence asymptotics for VAR processes of infinite order. International Journal of Bioelectromagnetism. v. 10, p. 31-36, 2008.Qualis: Não identificado (INTERNATIONAL JOURNAL OF BIOELECTROMAGNETISM)
59.	Tavares, J. R. ; de Souza, R. F. ; Meira, G. L. S. ; Gueiros-Filho, F. J.. Cytological Characterization of YpsB, a Novel Component of the Bacillus subtilis Divisome. Journal of Bacteriology (Print). v. 190, p. 7096-7107, 2008. Qualis: A3
60.	TORRES, T.T.; AZEREDO-ESPIN, A.M.L.. Characterization of polymorphic microsatellite markers for the blowfly Chrysomya albiceps (Diptera: Calliphoridae). Molecular Ecology Resources (Print). v. 8, p. 208-210, 2008. Qualis: A1
61.	TORRES, T.T.; METTA, M. ; OTTENWÄLDER, B. ; SCHLÖTTERER, C.. Gene expression profiling by massively parallel sequencing.. Genome Research. v. 18, p. 172-177, 2008. Qualis: A1
62.	Van, P.T. ; Schmid, A.K. ; King, N.L. ; Kaur, A. ; Pan, M. ; Whitehead, K. ; KOIDE, T. ; Facciotti, M.T. ; Goo, Y.A. ; Deutsch, E.W. ; Reiss, D.J. ; Mallick, P. ; Baliga, N.S.. Halobacterium salinarum NRC-1 PeptideAtlas: toward strategies for targeted proteomics and improved proteome coverage.. Journal of Proteome Research. v. 7, p. 3755-3764, 2008. Qualis: A1
63.	Verjovski-Almeida, S.; Verjovski-Almeida, S. ; DEMARCO, R. Current developments on Schistosoma proteomics. Acta Tropica. v. 108, p. 183-185, 2008. Qualis: A1
64.	VIBRANOVSKI, M. D.; KOERICH, L. B. ; CARVALHO, A. B.. Two New Y-Linked Genes in Drosophila melanogaster. Genetics (Austin, Tex.). v. 179, p. 2325-2327, 2008. Qualis: A2
65.	Yan, S. ; Liu, H. ; Mohr, T. J. ; Jenrette, J. ; Chiodini, R. ; Zaccardelli, M. ; SETUBAL, J. C. ; Vinatzer, B. A.. Role of Recombination in the Evolution of the Model Plant Pathogen Pseudomonas syringae pv. tomato DC3000, a Very Atypical Tomato Strain. Applied and Environmental Microbiology. v. 74, p. 3171-3181, 2008. Qualis: A1
66.	Yilmaz A ; Nishiyama-Junior, M. Y. ; Garcia-Fuentes B ; SOUZA, G. M. ; Janies D ; Gray J ; Grotewold E. GRASSIUS: A Platform for Comparative Regulatory Genomics Across the Grasses. Plant Physiology (Bethesda). v. 10.110, p. 10.1104/pp.108., 2008.Qualis: A1
67.	ZAINI, Paulo A. ; FOGAÇA, A.C. ; LUPO, F.N. G. ; NAKAYA, Helder I ; VENCIO, Ricardo Z N ; DASILVA, A.M.. The Iron Stimulon of Xylella fastidiosa Includes Genes for Type IV Pilus and Colicin V-Like Bacteriocins. Journal of Bacteriology. v. 190, p. 2368-2378, 2008. Qualis: A3
68.	Zerillo, Marcelo M ; VAN SLUYS, M A ; Camargo, Luis ; Monteiro-Vitorello, Claudia B. Characterization of new IS elements and studies of their dispersion in two subspecies of Leifsonia xyli. BMC Microbiology (Online). v. 8, p. 127, 2008. Qualis: A2

2007

1.	ALVES, J. M. P.; BUCK, G. A.. Automated System for Gene Annotation and Metabolic Pathway Reconstruction Using General Sequence Databases. Chemistry & Biodiversity (Print). v. 4, p. 2593-2602, 2007. Qualis: A4
2.	AMARAL, L. I. V. DO ; Gaspar M. ; COSTA, P. F. ; AIDAR, M. P. M. ; BUCKERIDGE, M. S.. Novo método enzimático rápido e sensível de extração e dosagem de amido em materiais vegetais.. Hoehnea (São Paulo). v. 34, p. 425-431, 2007. Qualis: B4
3.	ANDRIOLI, Luiz Paulo ; SOUZA, Glaucia Mendes ; DA SILVA, A. M.. Staurosporine induces tyrosine phosphorylation in Dictyostelium discoideum proteins. Cell Biochemistry and Function. v. 25, p. 555-561, 2007. Qualis: B1
4.	ARMELINI, M. ; LIMA-BESSA, K. ; MARCHETTO, M. ; MUOTRI, A. R. ; CHIGANCAS, V. ; LEITE, R. ; CARVALHO, H. ; MENCK CF. Exploring DNA damage responses in human cells with recombinant adenoviral vectors.. Human & Experimental Toxicology. v. 6, p. 1340-1344, 2007. Qualis: B1
5.	BARRERA, J. ; CESAR JÚNIOR, R. M. ; HUMES JUNIOR, C. ; MARTINS JÚNIOR, D. C. ; PATRÃO, D. F. C. ; SILVA, P. J. ; BRENTANI. HP. A feature selection approach for identification of signature genes from SAGE data.. BMC Bioinformatics. v. 8, p. 169, 2007. Qualis: A1
6.	BATISTA, L. F. Z. ; ROOS, W. ; CHRISTMANN, M. ; MENCK CF ; KAINA, B.. Differential sensitivity of malignant glioma cells to methylating and chloroethylating anticancer drugs: p53 determines the switch by regulating xpc, ddb2 and DNA double-strand breaks.. Cancer Research. v. 67, p. 11886-11895, 2007. Qualis: A1
7.	BUCKERIDGE, M. S. Mudanças climáticas, biodiversidade e sociedade: como a teoria de redes pode ajudar a compreender o presente e planejar o futuro?. Multiciência (UNICAMP). v. 8, p. 88-107, 2007.Qualis: Não identificado (MULTICIÊNCIA)
8.	CANTAO, M. ; FERREIRA, J. E. ; LEMOS, E. G. M.. Optimal Clones Identifier for Genomic Shotgun Libraries: OC Identifier Tool. GENETICS AND MOLECULAR RESEARCH. v. 6, p. 743-755, 2007.Qualis: B3
9.	CARREIRA, A. C. O. ; BASTOS, C. ; Verjovski-Almeida, S.. Probing SERCA1a sarcoplasmic reticulum Ca2+-ATPase phosphorylation-site mutant D351E with inorganic phosphate. Brazilian Journal of Medical and Biological Research. v. 40, p. 1323-1332, 2007. Qualis: A4
10.	CHIROMATZO, A. O. ; OLIVEIRA, T. Y. K. ; PEREIRA, G. ; COSTA, A. Y. ; MONTESCO, C. A. E. ; GRAS, D. E. ; YOSETAKE, F. ; CERVATO, M. C. ; PRADO, P. R. R. ; CARDENAS, R. G. C. C. L. ; CERRI, R. ; BORGES, R. L. ; LEMOS, R. N. ; ALVARENGA, S. M. ; PERALLIS, V. R. C. ; PINHEIRO, D. G. ; SILVA, I. T. ; BRANDÃO, R. M. ; CUNHA, M. A. V. ; GIULIATTI, S.. miRNApath: a database of miRNAs, target genes and metabolic pathways. Genetics and Molecular Research. v. 6, p. 859-865, 2007.Qualis: B3
11.	da Silva Neto, J. F. ; KOIDE, T. ; Abe, C.M. ; Gomes, S. L. ; MARQUES, M. V.. Role of sigma54 in the regulation of genes involved in type I and type IV pili biogenesis in Xylella fastidiosa. Archives of Microbiology. v. 189, p. 249-261, 2007. Qualis: B2
12.	da Silva Neto, J. F. ; KOIDE, T. ; MARQUES, M. V. ; Gomes, S. L.. The single extracytoplasmic-function sigma factor of Xylella fastidiosa is involved in the heat shock response and presents an unusual regulatory mechanism.. Journal of Bacteriology. v. 189, p. 551-560, 2007. Qualis: A3
13.	Da SILVA, F. L. B.; OLIVARES, Wilmer ; COLMENARES, Pedro J. BASIC STATISTICS AND VARIATIONAL CONCEPTS BEHIND THE REVERSE MONTE CARLO TECHNIQUE. Molecular Simulation, Londres. v. 33, p. 639-647, 2007. Qualis: Não identificado (MOLECULAR SIMULATION, LONDRES)
14.	DASILVA, J ; FERNANDES, R ; TICLI, F ; OLIVEIRA, C ; MAZZI, M ; FRANCO, J ; GIULIATTI, S ; PEREIRA, P ; SOARES, A ; SAMPAIO, S. Triterpenoid saponins, new metalloprotease snake venom inhibitors isolated from Pentaclethra macroloba. Toxicon (Oxford). v. 50, p. 283-291, 2007. Qualis: A4
15.	de Morais, H. A. ; GUIMARAES, A. M. S. ; VIDOTTO, O ; BAUMANN, A ; BIONDO, A. W. ; MESSICK, J. B.. Co-infection with Mycoplasma haemofelis and `Candidatus Mycoplasma haemominutum¿ in three cats from Brazil?. Journal of Feline Medicine and Surgery. v. 9, p. 518-520, 2007. Qualis: A1
16.	DURHAM, A. M.; Ling KH ; MA, R. ; RIVAILLER, P. ; IVENS, A. ; MADEIRA, A. M. ; Mungall K. ; Novaes, J. ; Sobreira, T.J. ; GRUBER, A. ; BERRIMAN, M. ; Tomley, F. ; DEAR, P. H. ; WAN, K. L.. Sequencing and analysis of chromosome 1 of Eimeria tenella reveals a unique segmental organization. Genome Research. v. 17, p. 311-319, 2007. Qualis: A1
17.	DURHAM, A. M.; MACHADO-LIMA, A. ; Hernando A. del Portillo. Computational methods in noncoding RNA research. Journal of Mathematical Biology (Print). v. 56, p. 15-49, 2007. Qualis: A4
18.	FAN, C. ; VIBRANOVSKI, M. D. ; CHEN, Y. ; LONG, M.. A Microarray Based Genomic Hybridization Method for Identification of New Genes in Plants: Case Analyses of Arabidopsis and Oryza. Journal of Integrative Plant Biology. v. 49, p. 915-926, 2007.Qualis: A1
19.	FANGANIELLO, R. D. ; SERTIE, A. L. ; REIS, EM ; YEH, E. ; OLIVEIRA, N. ; BUENO, D. F. ; KERKIS, I. ; ALONSO, N. ; CAVALHEIRO, S. ; MATSUSHITA, H. ; VERJOVSKI-ALMEIDA, Sergio ; BUENO, M. R. P.. Apert p.Ser252Trp mutation in FGFR2 alters osteogenic potential and gene expression of cranial periosteal cells. Molecular Medicine (Cambridge). v. 13, p. 422-442, 2007. Qualis: Não identificado (MOLECULAR MEDICINE)
20.	FUJITA, A.; SATO, João Ricardo ; FERREIRA, Carlos Eduardo ; SOGAYAR, Mari Cleide. GEDI: a user-friendly toolbox for analysis of large-scale gene expression data. BMC Bioinformatics. v. 8, p. 457, 2007. Qualis: A1
21.	FUJITA, A.; SATO, João Ricardo ; MALPARTIDA, Humberto Miguel Garay ; MORETTIN, Pedro Alberto ; SOGAYAR, Mari Cleide ; FERREIRA, Carlos Eduardo. Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method. Bioinformatics (Oxford. Print). v. 23, p. 1623/13-1630, 2007. Qualis: Não identificado (PRINT))
22.	FUJITA, A.; SATO, João Ricardo ; MALPARTIDA, Humberto Miguel Garay ; Yamaguchi, Rui ; Miyano, Satoru ; SOGAYAR, Mari Cleide ; FERREIRA, Carlos Eduardo. Modeling gene expression regulatory networks with the sparse vector autoregressive model. BMC Systems Biology. v. 1, p. 39, 2007. Qualis: A1
23.	Gonçalves EG ; Mayo SJ ; SLUYS MAV. ; Salatino A. Combined genotypic-phenotypic phylogeny of the tribe Spathicarpeae (Araceae) with reference to independent events of invasion to Andean regions.. Molecular Phylogenetics and Evolution. v. jan, p. in press, 2007. Qualis: A1
24.	GUIMARAES, A. M. S.; BIONDO, A. W. ; LARA, A. C. ; MESSICK, J. B.. Exploratory study of Mycoplasma suis (Eperythrozoon suis) on four commercial pig farms in southern Brazil. Veterinary Record. v. 160, p. 50-53, 2007. Qualis: A1
25.	GUIMARAES, A. M. S.; Javorouski, Manoel L. ; Bonat, Marcelo ; Lacerda, Oneida ; Balbinotti, Bruna ; Queiroz, Lucyenne G.P.B. ; Timenetsky, Jorge ; Biondo, Alexander W. ; Messick, Joanne B.. Molecular detection of "Candidatus Mycoplasma haemominutum" in a lion (Panthera leo) from a brazilian zoological garden. Revista do Instituto de Medicina Tropical de São Paulo (Impresso). v. 49, p. 195-196, 2007. Qualis: B1
26.	HAVLIOGLU, N. ; WANG, J. ; FUSHIMI, K. ; VIBRANOVSKI, M. D. ; KAN, Z. ; GISH, W. ; FEDOROV, A. ; LONG, M. ; WU, J. Y.. An Intronic Signal for Alternative Splicing in the Human Genome. Plos One. v. 2, p. e1246, 2007.Qualis: A1
27.	HÜNEMEIER, T.; Carvalho, CB ; Marrero, AR ; SALZANO, F. M. ; BORTOLINI, M. C.. Niger-Congo speaking populations and the formation of the Brazilian gene pool: mtDNA and Y-chromosome data. American Journal of Physical Anthropology. v. 133, p. 854-867, 2007. Qualis: A2
28.	KASHIWABARA, A. Y. ; VIEIRA, D. C. G. ; MACHADO-LIMA, A. ; DURHAM, A.M.. Splice site prediction using stochastic regular grammars. GENETICS AND MOLECULAR RESEARCH. v. 6, p. 105-115, 2007.Qualis: B3
29.	LEVANOGARCIA, Julio ; MORTARA, Renato A ; Verjovski-Almeida, S. ; DEMARCO, Ricardo. Characterization of Schistosoma mansoni ATPDase2 gene, a novel apyrase family member. Biochemical and Biophysical Research Communications. v. 352, p. 384-389, 2007. Qualis: A3
30.	LOURO, Rodrigo ; NAKAYA, Helder I. ; AMARAL, Paulo Paiva ; FESTA, Fernanda ; SOGAYAR, Mari Cleide ; SILVA, Aline M. da ; VERJOVSKI-ALMEIDA, Sergio ; REIS, EM. Androgen responsive intronic non-coding RNAs. BMC BIOLOGY, Inglaterra. v. 5:4, n. 4, p. 1-14, 2007. Qualis: Não identificado (BMC BIOLOGY, INGLATERRA)
31.	M. Menck, Carlos F.; Menck, CF ; Armelini, MG ; Lima-Bessa, Keronninn M. ; Armelini, Melissa G.. On the Search for Skin Gene Therapy Strategies of Xeroderma Pigmentosum Disease. Current Gene Therapy. v. 7, p. 163-174, 2007. Qualis: A4
32.	MANETTI, Maria Elisa ; ROSSI, M. ; COSTA, A. P. P. ; Clausen AM ; SLUYS MAV.. Radiation of the Tnt1 retrotransposon superfamily in three Solanaceae genera.. BMC Evolutionary Biology (Online). v. 7, p. 34, 2007. Qualis: A1
33.	MARTINS-PINHEIRO, M. ; MARQUES, R. ; MENCK CF. Genome analysis of DNA repair genes in the alpha proteobacterium Caulobacter crescentus. BMC Microbiology (Online). v. 7, p. 17, 2007. Qualis: A2
34.	REIS, EM; Nakaya, Helder I ; Amaral, Paulo P ; LOURO, Rodrigo ; Lopes, André ; FACHEL, Angela A ; Moreira, Yuri B ; El-Jundi, Tarik A ; da Silva, Aline M ; Reis, Eduardo M ; VERJOVSKI-ALMEIDA, Sergio. Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription. GenomeBiology.com (London. Genome Biology. v. 8, p. 1-25, 2007. Qualis: Não identificado (GENOME BIOLOGY)
35.	NAKAYA, Helder I ; BECKEDORFF, Felipe Cesar F ; Baldini, ML ; FACHEL, A. ; REIS, Eduardo M ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Splice Variants of TLE Family Genes and Up-Regulation of a TLE3 Isoform in Prostate Tumors.. Biochemical and Biophysical Research Communications,. v. 364, p. 918-923, 2007. Qualis: A3 (BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS)
36.	NENE, V. ; WORTMAN, J. R. ; SEVERALAUTHORS, O. ; MENCK CF ; VERJOVSKI-ALMEIDA, S. ; SEVERSON, D.. Genome Sequence of Aedes aegypti, a Major Arbovirus Vector. Science. v. 316, p. 1718-1723, 2007. Qualis: A1
37.	OJOPI, E ; OLIVEIRA, P. S. L. ; NUNES, D. N. ; PAQUOLA, A ; DEMARCO, Ricardo ; GREGORIO, S. ; AIRES, K. ; MENCK, C. F. M. ; LEITE, Luciana C ; Verjovski-Almeida, S. ; DIAS NETO, E.. A quantitative view of the transcriptome of Schistosoma mansoni adult-worms using SAGE. BMC Genomics. v. 8, p. 186, 2007. Qualis: A2
38.	ROCHA, F. R. ; Papini-Terzi F. S. ; Nishiyama-Junior, M. Y. ; VENCIO, R. Z. N. ; VICENTINI, R. ; DUARTE, R. ; VINAGRE, F. ; Medeiros, A ; di MAURO, S. M. Z. ; ULIAN, E. C. ; HEMERLY, A. S. ; FIGUEIRA, A. ; SILVA-FILHO, M. C. ; MENOSSI, M. ; SOUZA, G. M.. Signal transduction-related responses to phytohormones and environmental challenges in sugarcane. BMC Genomics. v. 8, p. 71, 2007. Qualis: A2
39.	ROELA, R. A. ; CARRARO, D. M. ; BRENTANI. HP ; KAIANO, J. ; SIMÃO, D. F. ; GUARNIEIRO, R. ; LOPES, L. F. ; BOROJEVIC, R. ; BRENTANI, M. M.. Gene stage-specific expression in the microenvironment of pediatric myelodysplastic syndromes. Leukemia Research. v. 31, p. 579-589, 2007. Qualis: A3
40.	ROOS, W. ; BATISTA, L. F. Z. ; NAUMANN, S. ; WELLER, M. ; MENCK CF ; KAINA, B.. Mechanism of apoptotic death triggered by methylating agent-induced DNA damage in glioma cells. Oncogene (Basingstoke). v. 26, p. 186-197, 2007. Qualis: A1
41.	SATO, João Ricardo ; FUJITA, A. ; AMARO JR, Edson ; MIRANDA, Janaína Mourão ; MORETTIN, Pedro Alberto ; BRAMMER, Michael J. DWT-CEM: An algorithm for scale-temporal clustering in fMRI. Biological Cybernetics. v. 97, p. 33-45, 2007. Qualis: A2
42.	SENGER, H. ; SILVA, F. A. B. ; MENDES, M. J. ; RONDINI, R. A. ; de FARIAS, C. R. G.. Plataformas Grid para Democracia Eletrônica. IP. Informática Pública. v. 9, p. 37-54, 2007.Qualis: Não identificado (INFORMÁTICA PÚBLICA)
43.	SETTA, N. ; COSTA, A. P. P. ; Lopes FR ; SLUYS MAV. ; CARARETO, C. M.. Transposon Display supports transpositional activity of P element in species of the saltans group of Drosophila. Journal of Genetics. v. 86, p. 37-43, 2007.Qualis: B3
44.	SETUBAL, J C ; Verjovski-Almeida, S.. Brazilian Symposium on Bioinformatics.. Computers in Biology and Medicine. v. 37, p. 113-114, 2007.Qualis: A2
45.	Snyder, E. E. ; Kampanya, N. ; Lu, J. ; Nordberg, E. K. ; Karur, H. R. ; Shukla, M. ; Soneja, J. ; Tian, Y. ; Xue, T. ; Yoo, H. ; Zhang, F. ; Dharmanolla, C. ; Dongre, N. V. ; Gillespie, J. J. ; Hamelius, J. ; Hance, M. ; Huntington, K. I. ; Jukneliene, D. ; Koziski, J. ; SETUBAL, J. C.. PATRIC: The VBI PathoSystems Resource Integration Center. Nucleic Acids Research. v. 35, p. D401-D406, 2007. Qualis: A1
46.	SOUSA-CANAVEZ, J. M. ; BETON, Daniela ; Gonzalez-Kristeller, D.C. ; DA SILVA, A. M.. Identification and domain mapping of Dictyostelium discoideum type-1 protein phosphatase inhibitor-2. Biochimie (Paris). v. 89, p. 692-701, 2007. Qualis: A2
47.	Takahashi, D. Y. ; Baccalá, L. A. ; Sameshima, K.. Connectivity inference between neural structures via partial directed coherence. Journal of Applied Statistics. v. 34, p. 1259-1273, 2007. Qualis: B1
48.	TONINI, P. P. ; LISBOA, C. G. ; SILVA, C. O. ; VIVEIROS, S. C. M. ; BUCKERIDGE, M. S.. Testa is involved in the control of storage mobilisation in seeds of Sesbania virgata (Cav.) Pers., a tropical legume tree from the Atlantic Forest. Trees (Berlin). v. 21, p. 13-21, 2007. Qualis: A2
49.	TREPODE, N. W. ; ARMELIN, H. A. ; BITTNER, M. L. ; BARRERA, J. ; GUBITOSO, M. D. ; HASHIMOTO, R. F.. A Robust Structural PGN Model for Control of Cell-Cycle Progression Stabilized by Negative Feedbacks. EURASIP Journal on Bioinformatics and Systems Biology (Online). v. 2007, p. 1-11, 2007. Qualis: Não identificado (EURASIP JOURNAL ON BIOINFORMATICS AND SYSTEMS BIOLOGY)
50.	VENANCIO, Thiago M ; DEMARCO, Ricardo ; ALMEIDA, Giulliana T ; OLIVEIRA, Katia C P ; SETUBAL, Joao C ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Analysis of Schistosoma mansoni genes shared with Deuterostomia and with possible roles in host interactions.. BMC Genomics. v. 8, p. 407, 2007. Qualis: A2
51.	Verjovski-Almeida, S.; VENANCIO, Thiago M ; OLIVEIRA, Katia C P ; ALMEIDA, Giulliana T ; DEMARCO, Ricardo. Use of a 44k oligoarray to explore the transcriptome of Schistosoma mansoni adult worms. Experimental Parasitology. v. 117, p. 236-245, 2007. Qualis: A4
52.	VÊNCIO, R. Z. N. ; VARUZZA, L. ; PEREIRA, C. A. B. ; BRENTANI. HP ; SHMULEVICH, I.. Simcluster: clustering enumeration gene expression data on the simplex space. BMC Bioinformatics. v. 8, p. 246, 2007. Qualis: A1
53.	XU, P. ; ALVES, J. M. P. ; Kitten, T. ; Brown, A. ; Chen, Z. ; OZAKI, L. S. ; MANQUE, P. ; Ge, X. ; SERRANO, M. G. ; PUIU, D. ; Hendricks, S. ; WANG, Y. ; Chaplin, M. D. ; Akan, D. ; Paik, S. ; PETERSON, D. L. ; Macrina, F. L. ; BUCK, G. A.. Genome of the Opportunistic Pathogen Streptococcus sanguinis. Journal of Bacteriology (Print). v. 189, p. 3166-3175, 2007. Qualis: A3
54.	Yu, G.X. ; Snyder, E.E. ; Boyle, S.M. ; Crasta, O.R. ; Czar, M. ; Mane, S.P. ; Purkayastha, A. ; Sobral, B. ; Setubal, J.C.. A versatile computational pipeline for bacterial genome annotation improvement and comparative analysis, with Brucella as a use case. Nucleic Acids Research. v. 35, p. 3953-3962, 2007. Qualis: A1

2006

1.	DURHAM, A. M.; ALBRECHT, L. ; Emilio F. Merino ; HOFFMANN, E. H. ; URBANO, M. ; de Mattos Ferreira, R.G. ; OSAKABE, A. L. ; Dalla Martha, R.C. ; Ramharter, M. ; FERREIRA, J. E. ; Hernando A. del Portillo ; WUNDERLICH, G.. Extense variant gene family repertoire overlap in Western Amazon Plasmodium falciparum isolates. Molecular and Biochemical Parasitology (Print). v. 150, p. 157-165, 2006. Qualis: A4
2.	ALCÂNTARA, P. H. N. ; MARTIN, L. ; SILVA, C. O. ; DIETRICH, S. M. C. ; BUCKERIDGE, M. S.. Purification of a beta-galactosidase from cotyledons of Hymenaea courbaril L. (Leguminosae. Enzyme properties and biological function. Plant Physiology and Biochemistry (Paris). v. 44, p. 619-627, 2006. Qualis: A1
3.	Almeida E.M. ; COSTA, P. F. ; BUCKERIDGE, M. S. ; ALVES, M. A. S.. Potential bird dispersers of Psychotria in an area of Atlantic Forest at Ilha Grande, RJ, Southeast Brazil: a biochemical analysis of the fruits. BRAZILIAN JOURNAL OF BIOLOGY, São Paulo. v. 66, n. 1, p. 29-41, 2006. Qualis: Não identificado (BRAZILIAN JOURNAL OF BIOLOGY, SÃO PAULO)
4.	ANDRIOLIY, L. P. ; SOUZA, G. M. ; da SILVA, A. M.. Staurosporine induces tyrosine phosphorylation in Dictyostelium discoideum proteins. Cell Biochemistry and Function. v. 24, p. 1-7, 2006.Qualis: B1
5.	Anghinah, R. ; Basile, L. I. ; Schmidt, M. T. ; Sameshima, Koichi ; Gattaz, W. F.. Artefatos biológicos no EEG quantitativo. Arquivos de Neuro-Psiquiatria, São Paulo, Brasil. v. 64, n. 2a, p. 264-268, 2006. Qualis: Não identificado (ARQUIVOS DE NEURO-PSIQUIATRIA, SÃO PAULO, BRASIL)
6.	ARAÚJO, L. V. ; SOARES, M. A. ; TANURI, A. ; OLIVEIRA, S. M. ; CHEQUER, P. ; SABINO, E. C. ; FERREIRA, J. E.. DBCollHIV: A Database System for Collaborative HIV analysis in Brazil. GENETICS AND MOLECULAR RESEARCH. v. 5, p. 203-215, 2006. Qualis: B3
7.	Baccalá, L. A. ; Sameshima, K.. Comments on `Is Partial Coherence a Viable Technique for Identifying Generators of Neural Oscillations?¿. Biological Cybernetics, In press. v. 95, p. 135-141, 2006. Qualis: Não identificado (BIOLOGICAL CYBERNETICS, IN PRESS)
8.	BARRETO, C. C. ; ARAÚJO, L. V. ; FERREIRA, J. E. ; SABINO, E. C.. Trends in Antiretroviral Drug Resistance and Clade Distributions Among HIV-1--Infected Blood Donors in Sao Paulo, Brazil. JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES. v. 41, n. 3, p. 388-341, 2006. Qualis: A1 (JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES)
9.	BATISTA, L. F. Z. ; CHIGANCAS, V. ; BRUMATTI, G. P. ; AMARANTES-MENDES, G. ; MENCK CF. Involvement of DNA replication in ultraviolet-induced apoptosis of mammalian cells.. Apoptosis (London). v. 11, p. 1139-1148, 2006. Qualis: A1
10.	BECKER, C. ; LACCHINI, S. ; MUOTRI, A. R. ; SILVA, G. ; CASTELLI, J. ; VASSALLO, P. ; MENCK CF ; KRIEGER, J.. Skeletal muscle cells expressing VEGF induce capillary formation and reduce cardiac injury in rats. International Journal of Cardiology. v. 113, p. 348-354, 2006. Qualis: A3
11.	BERRA, C. M. ; MENCK CF ; MASCIO, P.. Oxidative stress, genome lesions and signaling pathways in cell cycle control, in press. Química Nova (Online). v. 29, p. 1340-1344, 2006.Qualis: A4
12.	BRASCHI, Simon ; CURWEN, RACHEL S. ; ASHTON, PETER D. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; WILSON, Alan. The tegument surface membranes of the human blood parasiteSchistosoma mansoni: A proteomic analysis after differential extraction. Proteomics (Weinheim. Print). v. 6, p. 1471-1482, 2006. Qualis: Não identificado (PRINT))
13.	CARVALHO, R.A. ; TORRES, T.T. ; AZEREDO-ESPIN, A.M.L.. A survey of mutations in the Cochliomyia hominivorax (Diptera: Calliphoridae) esterase E3 gene associated with organophosphate resistance and the molecular identification of mutant alleles.. Veterinary Parasitology. v. 140, p. 344-351, 2006. Qualis: A1
14.	CARVALHO, Sidney Jurado de ; GHIOTTO, Renato Carlos Tonin ; Da SILVA, F. L. B.. Monte Carlo and modified Tanford-Kirkwood results for macromolecular electrostatic calculations. Journal of Physical Chemistry B, ACS. v. 110, p. 8832-8839, 2006. Qualis: A2 (JOURNAL OF PHYSICAL CHEMISTRY B)
15.	Da SILVA, F. L. B.; LUND, Mikael ; JÖNSSON, Bo ; ÅKESSON, Torbjörn. On the Complexation of Proteins and Polyelectrolytes. Journal of Physical Chemistry B, ACS. v. 110, n. 9, p. 4459-4464, 2006. Qualis: A2 (JOURNAL OF PHYSICAL CHEMISTRY B)
16.	DE OLIVEIRA, FRANCISCO MEIRELLES BASTOS ; DE ABREU DA SILVA, ISABEL CAETANO ; RUMJANEK, FRANKLIN DAVID ; DIAS-NETO, EMMANUEL ; GUIMARÃES, PEDRO EDSON MOREIRA ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; ?TROS, MICHAL ; FANTAPPIÉ, MARCELO ROSADO. Cloning the genes and DNA binding properties of High Mobility Group B1 (HMGB1) proteins from the human blood flukes Schistosoma mansoni and Schistosoma japonicum. Gene (Amsterdam). v. 377, p. 33-45, 2006. Qualis: A4
17.	DEMARCO, Ricardo ; Oliveira, Katia C. ; Venancio, Thiago M. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Gender biased differential alternative splicing patterns of the transcriptional cofactor CA150 gene in Schistosoma mansoni. Molecular and Biochemical Parasitology (Print). v. 150, p. 123-131, 2006. Qualis: A4
18.	DEMARCO, Ricardo ; VENANCIO, Thiago M ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. SmTRC1, a novel Schistosoma mansoni DNA transposon, discloses new families of animal and fungi transposons belonging to the CACTA superfamily.. BMC Evolutionary Biology (Online). v. 6, p. 89, 2006. Qualis: A1
19.	DURHAM, A. M.; HOFFMANN, E. H. ; MALAFRONTE, R. S. ; MORAES-AVILA, S. L. ; OSAKABE, A. L. ; WUNDERLICH, G. ; RIBOLLA, P. E. ; Hernando A. del Portillo ; URBANO, M.. Origins of sequence diversity in the malaria vaccine candidate merozoite surface protein-2 (MSP-2) in Amazonian isolates of Plasmodium falciparum. Gene (Amsterdam). v. 376, p. 224-230, 2006. Qualis: A4
20.	DURHAM, A. M.; Sobreira, T.J. ; GRUBER, A.. TRAP: automated classification, quantification and annotation of tandemly repeated sequences. BIOINFORMATICS, Oxford, Inglaterra. v. 22, n. 3, p. 361-362, 2006. Qualis: Não identificado (BIOINFORMATICS, OXFORD, INGLATERRA)
21.	FEITOSA, FABIANA M. ; CALVO, ERIC ; MERINO, EMILIO F. ; Durham, Alan M. ; JAMES, ANTHONY A. ; DE BIANCHI, ANTONIO G. ; MARINOTTI, OSVALDO ; CAPURRO, MARGARETH L.. A transcriptome analysis of the Aedes aegypti vitellogenic fat body. Journal of Insect Science (Online). v. 6, p. 1-26, 2006. Qualis: C
22.	Ferreira, A. R. J. ; Smulders, T. V. ; Sameshima, Koichi ; Mello, C. V. ; Jarvis, E. D.. VOCALIZATIONS AND ASSOCIATED BEHAVIORS OF THE SOMBRE HUMMINGBIRD (APHANTOCHROA CIRRHOCHLORIS) AND THE RUFOUS-BREASTED HERMIT (GLAUCIS HIRSUTUS). The Auk (Washington, D.C.). v. 123, p. 1129-1148, 2006. Qualis: A1
23.	FOLGUEIRA, M. A. A. K. ; SAMAIA, H. B. ; KATAYAMA, M. L. H. ; PATRÃO, D. F. C. ; CARRARO, D. M. ; MOURÃO NETO, M. ; BARBOSA, E. M. ; CALDEIRA, J. R. F. ; ABREU, A. P. S. ; LYRA, E. C. ; KAIANO, J. ; MOTA, L. D. ; CAMPOS, A. H. ; MACIEL, M. S.. Gene expression profiling of clinical stages II and III breast cancer. Brazilian Journal of Medical and Biological Research. v. 39, p. 1101-1103, 2006. Qualis: A4
24.	FONSECA, R. S. ; CARRARO, D. M. ; SAMAIA, H. B.. Mining ORESTES no-match database: can we still contribute to cancer transcriptome?. Genetics and Molecular Research, in press. v. 31, p. 24-32, 2006.Qualis: Não identificado (GENETICS AND MOLECULAR RESEARCH, IN PRESS)
25.	FUJITA, A.; SATO, João Ricardo ; RODRIGUES, Leonardo de Oliveira ; FERREIRA, Carlos Eduardo ; SOGAYAR, Mari Cleide. Evaluating different methods of microarray data normalization. BMC Bioinformatics. v. 7, p. 0/469, 2006. Qualis: A1
26.	Godoi, P. H. C. ; Galhardo, R. S. ; LUCHE, D. D. ; Van Sluys, M.-A. ; MENCK CF ; Oliva, G.. Structure of the Thiazole Biosynthetic Enzyme THI1 from Arabidopsis thaliana. The Journal of Biological Chemistry. v. 281, p. 30957-30966, 2006. Qualis: A1
27.	ITALIANO, I. ; FERREIRA, J. E.. Synchronization Options for Data Warehouse Designs. COMPUTER. v. 39, p. 53-57, 2006. Qualis: A2
28.	KOIDE, T.; SALEM-IZACC, S. ; Gomes, S. L. ; Vencio, R.Z.N.. SpotWhatR: a user-friendly microarray data analysis system.. Genetics and Molecular Research. v. 5, p. 93-107, 2006.Qualis: B3
29.	KOIDE, T.; VENCIO, R. ; Gomes, S. L.. Global gene expression analysis of the heat shock response in the phytopathogen Xylella fastidiosa.. Journal of Bacteriology (Print). v. 188, p. 5821-5830, 2006. Qualis: A3
30.	LIMA-BESSA, K. ; CHIGANCAS, V. ; STARY, A. ; KANOUCHE, P. ; SARASIN, A. ; ARMELINI, M. ; JACYSYN, J. ; AMARANTES-MENDES, G. ; AL, E. ; MENCK CF. Adenovirus mediated transduction of the human DNA polymerase eta cDNA. DNA Repair. v. 5, p. 925-934, 2006. Qualis: A1
31.	LISBOA, C. G. ; TONINI, P. P. ; TINÉ, M. A. S. ; BUCKERIDGE, M. S.. Endo-beta-mannanase from the endosperm of seeds of Sesbania virgata (Cav.) Pers. (Leguminosae): purification, characterisation and its dual role in germination and early seedling growth. Brazilian Journal of Plant Physiology. v. 18, p. 269-280, 2006. Qualis: A4 (INDIAN JOURNAL OF PLANT PHYSIOLOGY)
32.	LORENZINI, D ; SILVAJR, P ; SOARES, M ; ARRUDA, P ; SETUBAL, J ; DAFFRE, S. Discovery of immune-related genes expressed in hemocytes of the tarantula spider Acanthoscurria gomesiana. Developmental and Comparative Immunology. v. 30, p. 545-556, 2006. Qualis: A2
33.	MALAVAZI, I. ; SAVOLDI, M. ; DIMAURO, S. M. ; MENCK CF ; HARRIS, S. D. ; Goldman MH ; Goldman GH. Transcriptome analysis of Aspergillus nidulans exposed to camptothecin-induced DNA damage.. Eukaryotic Cell. v. 5, p. 1688-1704, 2006. Qualis: Não identificado (EUKARYOTIC CELL)
34.	MARCHETTO, M. ; CORREAL, R. ; MENCK CF ; MUOTRI, A. R.. Functional lentiviral vectors for xeroderma pigmentosum gene therapy. Journal of Biotechnology. v. 126, p. 424-430, 2006. Qualis: A3
35.	MARQUES, D. A. ; FOGLIO, M. A. ; MORGANTE, P. G. ; SLUYS MAV. ; SHEPHERD, S. L. K.. Biotechnology approaches for production of antiulcerogenic dihydro-epideoxyarteannin B isolated from Artemisia annua L.. Revista Brasileira de Farmacognosia. v. 16, p. 291-299, 2006. Qualis: A4
36.	Marques, Maria Rita ; Buckeridge, Marcos S. ; BUCKERIDGE, M. S. ; Braga, Marcia R. ; Dietrich, Sonia M. C.. Characterization of an extracellular endopolygalacturonase from the saprobe Mucor ramosissimus Samutsevitsch and its action as trigger of defensive response in tropical plants. Mycopathologia (1975. Print). v. 162, p. 337-346, 2006. Qualis: Não identificado (PRINT))
37.	MEDINA-SILVA, R. ; BARROS, M. ; GALHARDO, R. ; NETTO, L. E. S. ; COLEPICOLO, P. ; MENCK CF. Heat stress promotes mitochondrial instability and oxidative responses in yeast deficient in thiazole biosynthesis.. Research in Microbiology (Paris). v. 157, n. 3, p. 275-281, 2006. Qualis: A4
38.	MERINO, E. F. ; FERNANDEZ-BECERRA, C. ; DURHAM, A. M. ; FERREIRA, J. E. ; TUMILASCI, V. F. ; DARC-NEVES, J. ; DADARIO, A. ; SILVA-NUNES, M. ; FERREIRA, M. U. ; WICKRAMARACHCHI, T. A. ; PORTILLO, H. A.. Multi-character population study of the vir subtelomeric multigene superfamily of Plasmodium vivax, a major human malaria parasite. Molecular and Biochemical Parasitology (Print). v. 149, p. 10-16, 2006. Qualis: A4
39.	OLIVEIRA JUNIOR, C. F. DE ; BRAGA, M. R. ; BUCKERIDGE, M. S.. Efeitos de oligossacarídeos de xiloglucano sobre o metabolismo extracelular de Rudgea jasminoides durante o crescimento. Hoehnea (São Paulo), São Paulo. v. 33, n. 2, p. 239-246, 2006. Qualis: Não identificado (HOEHNEA , SÃO PAULO)
40.	Oliveira Junior, Clovis José Fernandes de ; Braga, Marcia Regina ; Buckeridge, Marcos Silveira ; BUCKERIDGE, M. S.. Isolamento de oligossacarídeos de xiloglucano de dicotiledôneas através de hidrólise enzimática e cromatografia de exclusão molecular. Brazilian Journal of Botany. v. 29, p. 391-397, 2006. Qualis: B1
41.	OSMAN, Ahmed ; NILES, EDWARD G. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; LoVerde, Philip T.. Schistosoma mansoni TGF-β Receptor II: Role in Host Ligand-Induced Regulation of a Schistosome Target Gene. PLoS Pathogens. v. 2, p. e54, 2006. Qualis: A1
42.	PACHECO, F. H. T. ; SILVA-STENICO, M. E. ; SILVA, D. M. ; Van Sluys, M. A.. Characterization of Agrobacterium tumefaciens Strains Isolated from Brazilian Plant Species. American Journal of Plant Physiology. v. 2, p. 142-150, 2006.Qualis: Não identificado (AMERICAN JOURNAL OF PLANT PHYSIOLOGY)
43.	PARMIGIANI, R. B. ; Bettoni, F. ; VIBRANOVSKI, M. D. ; LOPES, M. H. ; MARTINS, W. K. ; CUNHA, I. W. ; SOARES, F. A. ; de SOUZA, S. J. ; CAMARGO, A. A.. Characterization of a novel Cancer/Testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. PNAS. Proceedings of the National Academy of Sciences of the United States of America. v. 1, p. 1-10, 2006.Qualis: A1
44.	PARMIGIANI, R. B. ; BETTONI, F. ; VIBRANOVSKI, M. D. ; LOPES, M. H. ; MARTINS, W. K. ; CUNHA, I. W. ; SOARES, F. A. ; SIMPSON, A. J. G. ; DE SOUZA, S. J. ; CAMARGO, A. A.. Characterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. Proceedings of the National Academy of Sciences of the United States of America (Online). v. 103, p. 18066-18071, 2006. Qualis: A1
45.	PEIXOTO, BERNARDOR ; VÊNCIO, RICARDOZN ; EGIDIO, CAMILAM ; MOTA-VIEIRA, LUISA ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; REIS, EDUARDOM. Evaluation of reference-based two-color methods for measurement of gene expression ratios using spotted cDNA microarrays. BMC Genomics. v. 7, n. 1, p. 35, 2006. Qualis: A2
46.	PEREIRA, G. S. P. ; BRANDÃO, R. M. ; GIULIATTI, S. ; ZAGO, M. A. ; SILVA JUNIOR, W. A.. Gene Class Expression: analysis tool of Gene Ontology terms with gene expression data. Genetics and Molecular Research. v. 5, n. 1, p. 108-114, 2006.Qualis: B3
47.	PEREIRA, T. V. ; Rudnichi, M ; SOLER, J. M. P. ; KRIEGER, J. E.. Meta-analysis of aspirin for the prevention of preeclampsia: do the main randomized controlled trials support an association between low-dose aspirin and a reduced risk of developing preeclampsia?. Clinics. v. 61, p. 179-182, 2006. Qualis: B4
48.	PONTES, Elizangela R ; MATOS, Livia C ; SILVA, Eloisio A da ; XAVIER, Leandro S ; DIAZ, Bruno L ; SMALL, Isabelle A ; REIS, EM ; VERJOVSKI-ALMEIDA, Sergio ; BARCINSKI, Marcello A ; GIMBA, Etel R. Auto-antibodies in prostate cancer: Humoral immune response to antigenic determinants coded by the differentially expressed transcripts FLJ23438 and VAMP3. The Prostate (Print). v. 66, n. 14, p. 1463-1473, 2006. Qualis: A2
49.	Reis LF ; SLUYS MAV. ; Garrat RC ; Pereira HM ; Teixeira MM. GMOs: building the future on the basis of past experience. Anais da Academia Brasileira de Ciências. v. 78, p. 667-686, 2006. Qualis: A2
50.	RIBEIRO-DOS-SANTOS, GABRIELA ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; LEITE, LUCIANA C. C.. Schistosomiasis-a century searching for chemotherapeutic drugs. Parasitology Research (1987. Print). v. 99, p. 505-521, 2006. Qualis: Não identificado (PRINT))
51.	SACCARO-JUNIOR, N. L. ; SLUYS MAV. ; VARANI, A. M. ; ROSSI, M.. MudrA-like sequences from rice and sugarcane cluster as two bona fide transposon clades and two domesticated transposases.. Gene (Amsterdam). v. 6, p. in press, 2006. Qualis: A4
52.	SETUBAL, J. C. Lipoprotein computational prediction in spirochaetal genomes. Microbiology (Reading). v. 152, p. 113-121, 2006. Qualis: B1
53.	SILVA, A. M. DA ; AIDAR, M. P. M. ; BUCKERIDGE, M. S.. Caracterização parcial dos beta-glucanos ao longo do desenvolvimento foliar em Brachiaria decumbens Stapf. Hoehnea (São Paulo), São Paulo. v. 33, n. 1, p. 99-105, 2006.Qualis: Não identificado (HOEHNEA , SÃO PAULO)
54.	SOLER, J. M. P.; PEREIRA, A. C.. BiostatisticsTeaching in the New Genome Era. Proceedings of the Seventh International Conference on teaching Statistics. v. 4C, p. 1-5, 2006.Qualis: Não identificado (PROCEEDINGS OF THE SEVENTH INTERNATIONAL CONFERENCE ON TEACHING STATISTICS)
55.	SOLER, J. M. P.; PEREIRA, A. C. ; TÔRRES, C. H. ; KRIEGER, J. E.. Gene by environment QTL mapping through multiple trait analyses in blood pressure salt-sensitivity: identification of a novel QTL in rat chromosome 5. BMC Medical Genetics. v. 22, p. 10.1186/1471-23, 2006.Qualis: A4
56.	TINÉ, M. A. S. ; SILVA, C. O. ; LIMA, D. U. DE ; Carpita NC ; BUCKERIDGE, M. S.. Fine structure of a mixed-oligomer storage xyloglucan from seeds of Hymenaea courbaril. Carbohydrate Polymers, Irlanda. v. 66, p. 444-454, 2006. Qualis: Não identificado (CARBOHYDRATE POLYMERS, IRLANDA)
57.	TONINI, P. P. ; LISBOA, C. G. ; Frisch L ; Mercier, H. ; VIVEIROS, S. C. M. ; BUCKERIDGE, M. S.. Effect of abscisic acid on galactomannan degradation and endo-beta-mannanase activity in seeds of Sesbania virgata (Cav.) Pers.. Trees (Berlin). v. 20, p. 669-678, 2006. Qualis: A2
58.	Vencio, R.Z.N. ; KOIDE, T. ; Gomes, S. L. ; PEREIRA, CA. BayGO: Bayesian analysis of ontology term enrichment in microarray data.. BMC Bioinformatics. v. 7, p. 86, 2006. Qualis: A1
59.	VIBRANOVSKI, M. D.; SAKABE, N. J. ; de SOUZA, S. J.. A possible role of exon-shuffling in the evolution of signal peptides of human proteins. FEBS Letters (Print). v. 580, n. 6, p. 1621-1624, 2006.Qualis: A2

2005

1.	ALTHAUS, Lilian Karenina ; ALBERTON, Geraldo Camilo ; GUIMARAES, A. M. S. ; FIAMETTI, Amarildo. Exame macroscópcio das articulações de suínos artríticos no abatedouro. Archives of Veterinary Science. v. 10, n. 1, p. 13-19, 2005.Qualis: B2
2.	Anghinah, R. ; Caramelli, P. ; Takahashi, D. Y. ; Nitrini, R. ; Sameshima, Koichi. Estudo da coerência do eletrencefalograma na banda de frequência alfa em indivíduos adultos normais: resultados preliminares em 10 casos. Arquivos de Neuro-Psiquiatria, São Paulo. v. 63, n. 1, p. 83-86, 2005. Qualis: Não identificado (ARQUIVOS DE NEURO-PSIQUIATRIA, SÃO PAULO)
3.	ARAÚJO, P. G. ; ROSSI, M. ; JESUS, Erika Maria de ; SACCARO-JUNIOR, N. L. ; KAJIHARA, D. ; et al ; CHABREGAS, S. M. ; ULIAN, E. C. ; MENOSSI, M. ; SLUYS MAV.. Transcriptionally active transposable elements in recent hybrid sugarcane.. Plant Journal. v. 44, n. 5, p. 707-717, 2005. Qualis: A1
4.	ARMELINI, M. ; MUOTRI, A. R. ; MARCHETTO, M. ; LIMA-BESSA, K. ; SARASIN, A. ; MENCK CF. Restoring DNA repair capacity of cells from three distinct diseases by XPD gene recombinant adenovirus. Cancer Gene Therapy, England. v. 12, n. 4, p. 389-396, 2005. Qualis: Não identificado (CANCER GENE THERAPY, ENGLAND)
5.	BERALDO, F. H ; ALMEIDA, F. M. ; DA SILVA, A. M. ; GARCIA, C.R.S.. Cyclic AMP and calcium interplay as second messengers in melatonin-dependent regulation of Plasmodium falciparum cell cycle. Journal of Cell Biology. v. 170, n. 4, p. 551-557, 2005. Qualis: A1 (THE JOURNAL OF CELL BIOLOGY)
6.	BRENTANI, RICARDO R. ; CARRARO, DIRCE MARIA ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Reis, Eduardo M. ; NEVES, E. JORDÃO ; DE SOUZA, SANDRO J. ; CARVALHO, ALEX F. ; BRENTANI, Helena ; REIS, LUIZ F.L.. Gene expression arrays in Cancer Research: Methods and Applications.. Critical Reviews in Oncology/Hematology, Holanda. v. 54, n. 2, p. 95-105, 2005. Qualis: Não identificado (CRITICAL REVIEWS IN ONCOLOGY/HEMATOLOGY, HOLANDA)
7.	BUCKERIDGE, M. S.; HUTCHEON, I. ; REID, J. S. G.. The role of exo-(1-4)-beta-galactanase in the mobilisation of polysaccharides from the cotyledonary cell walls of Lupinus angustifolius L. following germination.. Annals of Botany. v. 96, p. 435-444, 2005. Qualis: A1
8.	Charchat-Fichman, H. ; Caramelli, P. ; Sameshima, K. ; Nitrini, R.. Declínio da capacidade cognitiva durante o envelhecimento. Revista Brasileira de Psiquiatria (São Paulo), Sao Paulo. v. 27, n. 12, p. 79-82, 2005.Qualis: Não identificado (REVISTA BRASILEIRA DE PSIQUIATRIA , SAO PAULO)
9.	CHEN, J. ; CIVEROLO, E. L. ; SLUYS MAV. ; OLIVEIRA, M. C.. Genetic Discovery in Xylella fastidiosa Through Sequence Analysis of Selected Randomly Amplified Polymorphic DNAs. Current Microbiology. v. 50, n. 2, p. 78-83, 2005. Qualis: B1
10.	COSTA, R. M. A. ; RIOU, L. ; PAQUOLA, A. ; MENCK CF ; SARASIN, A.. Transcriptional profiles of unirradiated or UV-irradiated human cells expressing either the cancer-prone XPB/CS allele or the non cancer-prone XPB/TTD allele. Oncogene (Basingstoke), Estados Unidos. v. 24, n. 8, p. 1359-1374, 2005. Qualis: Não identificado (ONCOGENE , ESTADOS UNIDOS)
11.	Da SILVA, F. L. B.; LINSE, S. ; JÖNSSON, Bo. The binding of charged ligands to macromolecules. Anomalous salt dependence.. Journal of Physical Chemistry B, The, ACS. v. 109, n. 5, p. 2007-2013, 2005. Qualis: Não identificado (JOURNAL OF PHYSICAL CHEMISTRY B, THE, ACS)
12.	DEMARCO, Ricardo ; MACHADO, ABIMAEL A. ; BISSON-FILHO, ALEXANDRE W. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Identification of 18 new transcribed retrotransposons in Schistosoma mansoni. Biochemical and Biophysical Research Communications (Print). v. 333, p. 230-240, 2005. Qualis: A3
13.	DURHAM, A. M.; KASHIWABARA, A. Y. ; MATSUNAGA, F. ; AHAGON, P. ; RAINONE, F. ; VARUZZA, L. ; GRUBER, A.. EGene: a configurable pipeline generation system for automated sequence analysis. BIOINFORMATICS, Bioinformatics Advance Access. v. 21, p. 2812-2813, 2005. Qualis: Não identificado (BIOINFORMATICS, BIOINFORMATICS ADVANCE ACCESS)
14.	FERRARI, Deborah Viviane ; BEVILACQUA, Maria Cecilia ; COSTA, O. A. ; Sameshima, K. ; TANAMATI, Liége Franzini. Telemetria de Respostas Neurais em Usuários de Implante Coclear. Revista da Sociedade Brasileira de Fonoaudiologia. v. 10, p. 172-177, 2005.Qualis: Não identificado (REVISTA DA SOCIEDADE BRASILEIRA DE FONOAUDIOLOGIA)
15.	Freitas, R.A. ; Martin, S. ; Santos, G.L. ; Valenga F. ; BUCKERIDGE, M. S. ; Reicher, F. ; Sierakowski, M.R.. Physico-chemical properties of seed xyloglucans from different sources. Carbohydrate Polymers. v. 60, n. 4, p. 507-514, 2005. Qualis: A1
16.	FUJITA, A.; MASSIRER, Katlin Brauer ; DURHAM, Alan Mitchell ; FERREIRA, Carlos Eduardo ; SOGAYAR, Mari Cleide. The GATO gene annotation tool for research laboratories.. Brazilian Journal of Medical and Biological Research (Impresso). v. 38, n. 11, p. 1571-1574, 2005. Qualis: A4
17.	GALHARDO, R. ; ROCHA, R. ; MARQUES, M. ; MENCK CF. A SOS-regulated operon involved in damage-inducible mutagenesis in Caulobacter crescentus. Nucleic Acids Research (Online), England. v. 33, n. 8, p. 2603-2614, 2005. Qualis: Não identificado (NUCLEIC ACIDS RESEARCH , ENGLAND)
18.	GIULIATTI, S.; FARIA JUNIOR, M. ; CAMARGO, F. ; CAMARGO, L. P. ; FRANÇA, S. C. ; SOARES, A. M.. An Algorithm to Classify Amino Acid Sequences into Protein Groups of Bothrops jararacussu Venomous Gland. Protein and Peptide Letters, Estados Unidos. v. 12, n. 4, p. 333-337, 2005. Qualis: Não identificado (PROTEIN AND PEPTIDE LETTERS, ESTADOS UNIDOS)
19.	GONCALVES, J. F. C. ; BARRETO, D. C. S. ; SANTOS JUNIOR, U. M. ; FERNANDES, A. V. ; SAMPAIO, P. T. B. ; BUCKERIDGE, M. S.. Growth, photosynthesis and stress indicators in young rosewood plants (Aniba rosaeodora Duck) under different light intensities. Brazilian Journal of Plant Physiology, Campinas. v. 17, n. 3, p. 325-334, 2005. Qualis: Não identificado (BRAZILIAN JOURNAL OF PLANT PHYSIOLOGY, CAMPINAS)
20.	GRANDBASTIEN, M. A. ; AUDEON, C. ; BONNIVARD, E. ; CASACUCERTA, J. M. ; CHALHOUB, B. ; COSTA, A. P. P. ; et al ; SLUYS MAV. ; MIHRI, C.. Stress Activation And Genomic Impact Of Tnt1 Retrotransposons In Solanaceae. Cytogenetic and Genome Research. v. 110, n. 1-4, p. 229-241, 2005. Qualis: A4
21.	HANCE, M. E. ; Czar, M. J. ; Azad, Abdu F. ; Purkayastha, A. ; Snyder, Eric E. ; Crasta, O. R. ; SETUBAL, J. C. ; Sobral, B. W.. The Pathogen Resource Integration Center: Implications for Rickettsial Research. Annals of the New York Academy of Sciences. v. 1063, p. 459-465, 2005. Qualis: A1
22.	HÜNEMEIER, T.; NEVES, A. G. ; SALZANO, F. M. ; NORBERG, I. ; HILL, K. ; HURTADO, A. M. ; CARNESE, F. R. ; GOICOECHEA, A. S. ; Hutz, M. ; Chies, JAB. T-Cell and chemokine receptor variation in South Amerindian populations. American Journal of Human Biology. v. 17, p. 515-518, 2005. Qualis: A1
23.	LEVANOGARCIA, Julio ; Verjovski-Almeida, S. ; DASILVA, Ana C R. Mapping transposon insertion sites by touchdown PCR and hybrid degenerate primer.. BioTechniques. v. 38, p. 225-229, 2005.Qualis: A4
24.	LIMA, W. ; Lima, Wanessa C. ; Menck, C. F. M. ; Sluys, Marie-Anne Van ; Menck, Carlos F.M.. Non-gamma-proteobacteria gene islands contribute to the Xanthomonas genome. Journal of Integrative Biology / Omics (Larchmont). v. 9, n. 2, p. 160-172, 2005. Qualis: Não identificado (JOURNAL OF INTEGRATIVE BIOLOGY / OMICS)
25.	Lima-Bessa, Keronninn M. ; Menck, Carlos F.M.. Skin Cancer: Lights on Genome Lesions. Current Biology, England. v. 15, n. 2, p. R58-R61, 2005. Qualis: Não identificado (CURRENT BIOLOGY, ENGLAND)
26.	Martins, M.C.M. ; VIEIRA, C. C. J. ; SILVA, C. O. ; BUCKERIDGE, M. S.. Carboidratos na bebida do café preparado sob diferentes processos. Ciência e Tecnologia de Alimentos. v. 25, n. 2, p. 382-386, 2005. Qualis: B1 (CIENCIA E TECNOLOGIA DE ALIMENTOS)
27.	MONTEIROVITORELLO, C B ; OLIVEIRA, Mariana Cabral de ; ZERILLO, M. M. ; VARANI, A. M. ; CIVEROLO, E. L. ; SLUYS MAV.. Xylella and Xanthomonas mobil`omics. Journal of Integrative Biology / Omics (Larchmont). v. 9, n. 2, p. 146-159, 2005. Qualis: Não identificado (JOURNAL OF INTEGRATIVE BIOLOGY / OMICS)
28.	Moreira, Leandro M. ; De Souza, Robson F. ; Digiampietri, Luciano A. ; Da Silva, Ana C.R. ; Setubal, Joao C.. Comparative Analyses of Xanthomonas and Xylella Complete Genomes. Journal of Integrative Biology / Omics (Larchmont). v. 9, n. 1, p. 43-76, 2005. Qualis: Não identificado (JOURNAL OF INTEGRATIVE BIOLOGY / OMICS)
29.	MORGANTE, P. G. ; BERRA, C. M. ; NAKABASHI, M. ; COSTA, R. M. A. ; MENCK CF ; M.A. VanSluys. Functional XPB/RAD25 redundancy in Arabidopsis genome: characterization of AtXPB2 and expression analysis.. Gene (Amsterdam), Netherlands. v. 344, p. 93-103, 2005. Qualis: Não identificado (GENE , NETHERLANDS)
30.	PAPINI-TERZI, Flavia ; ROCHA, Flavia R. ; VENCIO, Ricardo Z. N. ; OLIVEIRA, Katia C. ; FELIX, Juliana M. ; VINCENTINI, Renato ; ROCHA, Cristiane S. ; SIMÕES, Ana Carolina Quirino ; ULIAN, Eugenio C. ; Di MAURO, Sônia M.Z. ; DA SILVA, A. M. ; PEREIRA, Carlos A. B. ; MENOSSI, Marcelo ; SOUZA, Glaucia Mendes. Transcription profiling of signal transduction-related genes in sugarcane tissues.. DNA Research. v. 12, n. 1, p. 27-38, 2005. Qualis: A1
31.	PASHALIDIS, Stefano ; MOREIRA, Leandro M. ; ZAINI, Paulo A. ; CAMPANHARO, Joao C ; ALVES, Lucia M C ; CIAPINA, Luciane P ; VENCIO, Ricardo Z. N. ; LEMOS, Eliana G M ; DA SILVA, A. M. ; DA SILVA, Ana C. R.. Whole-genome expression Profiling of Xylella fastidiosa in response to growth on glucose.. OMICS: Journal of Integrative Biology. v. 9, p. 77-90, 2005. Qualis: Não identificado (OMICS: JOURNAL OF INTEGRATIVE BIOLOGY)
32.	PAULA, A. C. C. F. ; Souza, R.V. ; FIGUEIREDO-RIBEIRO, R. C. L. ; BUCKERIDGE, M. S.. Hypoglycemic activity of polysaccharide fractions containing b-glucan in different parts of plants of Rhynchelytrum repens (Willd.) C. E. Hubb., Poaceae. Brazilian Journal of Medical and Biological Research. v. 38, n. 6, p. 885-893, 2005. Qualis: A4
33.	REIS, EM; OJOPI, Elida P.b ; ALBERTO, Fernando L. ; RAHAL, Paula ; TSUKUMO, Fernando ; MANCINI, Ulisses M ; GUIMARÃES, Gustavo S ; THOMPSON, Gloria M A ; CAMACHO, Cleber ; MIRACCA, Elisabete C. ; CARVALHO, André L ; MACHADO, Abimael A ; PAQUOLA, Apua C. M. ; CERUTTI, Janete M. ; DASILVA, Aline M. ; PEREIRA, Gonçalo G. ; VALENTINI, Sandro R. ; NAGAI, Maria Aparecida ; KOWALSKI, Luiz Paulo ; VERJOVSKI-ALMEIDA, Sergio. Large-scale transcriptome analyses reveal new genetic marker candidates of head, neck and thyroid cancer.. Cancer Research (Chicago, Ill.), EUA. v. 65, n. 5, p. 1693-1699, 2005. Qualis: Não identificado (CANCER RESEARCH , EUA)
34.	Reis, Eduardo M. ; LOURO, Rodrigo ; NAKAYA, HELDER I. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. As Antisense RNA Gets Intronic. Journal of Integrative Biology / Omics (Larchmont), New Rochelle, NY. v. 9, n. 1, p. 2-12, 2005. Qualis: Não identificado (JOURNAL OF INTEGRATIVE BIOLOGY / OMICS , NEW ROCHELLE, NY)
35.	RIBEIRO, D. ; FARIAS, L. P. ; ALMEIDA, J. D. ; KASHIWABARA, P. M. ; RIBEIRO, A. F. C. ; SILVA FILHO, M. C. ; MENCK, C. F. M. ; SLUYS MAV.. Functional characterization of the thi1 promoter region from Arabidopsis thaliana. Journal of Experimental Botany, England. v. 56, n. 417, p. 1797-1804, 2005. Qualis: Não identificado (JOURNAL OF EXPERIMENTAL BOTANY, ENGLAND)
36.	SAMAIA, H. B.; GOMES, L. I. ; ESTEVES, G. H. ; CARVALHO, A. F. ; CRISTO, E. B. ; HIRATA JÚNIOR, R. ; MARQUES, S. M. ; CAMARGO, L. P. ; PELOSOF, A. ; ZITRON, C. ; SALLUM, R. A. ; MONTAGNINI, A. ; SOARES, F. A. ; NEVES, E. J. ; REIS, L. F. L.. Expression Profile of Malignant and Nonmalignant Lesions of Esophagus and Stomach: Differential Activity of Functional Modules Related to Inflammation and Lipid Metabolism. Cancer Research (Chicago, Ill.). v. 65, p. 7127-7136, 2005. Qualis: A1
37.	SAMAIA, H. B.; PATRÃO, D. F. C. ; CARRARO, D. M. ; SOARES, F. A. ; FOLGUEIRA, M. A. A. K. ; BRENTANI, M. M. ; REIS, L. F. L. ; CAMARGO, L. P. ; VÊNCIO, R. Z. N. ; BARBOSA, E. M.. Gene expression profile associated with response to doxorubicin-based therapy in breast cancer. Clinical Cancer Research, eua. v. 15, n. 11, p. 7434-7443, 2005. Qualis: A1 (CLINICAL CANCER RESEARCH)
38.	Sameshima, K.; Takahashi, D. Y. ; Baccalá, L. A.. Avaliando a complexidade da dinâmica cardiovascular por entropia amostral. Revista Brasileira de Hipertensão, Ribeirão Preto. v. 12, n. 1, p. 27-32, 2005.Qualis: Não identificado (REVISTA BRASILEIRA DE HIPERTENSÃO, RIBEIRÃO PRETO)
39.	SETUBAL, J; MOREIRA, L ; DASILVA, A. Bacterial phytopathogens and genome science. Current Opinion in Microbiology. v. 8, p. 595-600, 2005. Qualis: A1
40.	SILVA, P. J. S. ; HASHIMOTO, R. F. ; KIM, S. ; BARRERA, J. ; BRANDAO, L. O. ; SUH, E. ; DOUGHERTY, E. R.. Feature Selection Algorithms to Find Strong Genes. Pattern Recognition Letters. v. 26, n. 10, p. 1444-1453, 2005. Qualis: A2
41.	SIMOES, Ana C ; DASILVA, Aline M ; Verjovski-Almeida, S. ; REIS, Eduardo M. SAM Method as an Approach to Select Candidates for Human Prostate Cancer Markers. Lecture Notes In Bioinformatics. v. 3594, p. 202-205, 2005.Qualis: Não identificado (LECTURE NOTES IN BIOINFORMATICS)
42.	STOLF, B. S. ; ABREU, C. M. ; ARAUJO, M. B. M. ; DELLAMANO, M. ; MARTINS, W. K. ; CARVALHO, M. B. ; CURADO, M. P. ; DÍAZ, J. P. ; FABRI, A. ; SAMAIA, H. B. ; CARVALHO, A. F. ; SOARES, F. A. ; KOWALSKI, L. P. ; HIRATA JÚNIOR, R. ; REIS, L. F. L.. Expression profile of malignant and non-malignant diseases of the thyroid gland reveals altered expression of a common set of genes in goiter and papillary carcinomas.. Cancer Letters. v. 227, p. 59-73, 2005. Qualis: A1
43.	TORRES, TATIANA TEIXEIRA; AZEREDO-ESPIN, A.M.L.. Development of new polymorphic microsatellite markers for the New World screw-worm Cochliomyia hominivorax (Diptera: Calliphoridae). Molecular Ecology Notes. v. 5, p. 815-817, 2005. Qualis: Não identificado (MOLECULAR ECOLOGY NOTES)
44.	VENANCIO, Thiago M ; DEMARCO, Ricardo ; OLIVEIRA, Katia Cp ; SIMOES, Ana C ; DASILVA, Aline M ; Verjovski-Almeida, S.. Genomics and Gene Expression Management Tools for the Schistosoma Mansoni cDNA Microarray Project. Lecture Notes In Bioinformatics. v. 3594, p. 198-201, 2005.Qualis: Não identificado (LECTURE NOTES IN BIOINFORMATICS)
45.	Vencio, R.Z.N. ; KOIDE, T.. HTself: Self-Self Based Statistical Test for Low Replication Microarray Studies.. DNA Research. v. 12, p. 211-214, 2005. Qualis: A1
46.	VIBRANOVSKI, M. D.; SAKABE, N. J. ; OLIVEIRA, R. S. ; de SOUZA, S. J.. Signs of ancient and modern exon-shuffling are correlated to the distribution of ancient and modern domains along proteins. Journal of Molecular Evolution, Estados Unidos. v. 61, n. 3, p. 341-340, 2005.Qualis: Não identificado (JOURNAL OF MOLECULAR EVOLUTION, ESTADOS UNIDOS)

2004

1.	Baccalá, L. A. ; Alvarenga, M. Y. ; Sameshima, K. ; Jorge, C. L. ; Castro, L. H. M.. Graph theoretical characterization and tracking of neural connectivity during episodes of mesial temporal epileptic seizures. Journal of Integrative Neuroscience, Imperial College Press. v. 3, n. 4, p. 379-395, 2004. Qualis: Não identificado (JOURNAL OF INTEGRATIVE NEUROSCIENCE, IMPERIAL COLLEGE PRESS)
2.	BARRERA, J. ; CESAR JUNIOR, R. M. ; FERREIRA, J. E. ; GUBITOSO, M. D.. An environment for knowledge discovery in biology. COMPUTERS IN BIOLOGY AND MEDICINE, Washington, DC ,USA, July 2004. v. 34, n. 5, p. 371-459, 2004.Qualis: Não identificado (COMPUTERS IN BIOLOGY AND MEDICINE, WASHINGTON, DC ,USA, JULY 2004)
3.	BRAGA-NETO, U. ; HASHIMOTO, R. F. ; DOUGHERTY, E. R. ; NGUYEN, D. V. ; CARROLL, R. J.. Is Cross-Validation Better than Resubstitution for Ranking Genes. Bioinformatics (Oxford). v. 20, n. 2, p. 253-258, 2004. Qualis: A1
4.	BUCKERIDGE, M. S.; RAYON, C. ; URBANOWICZ, B. ; TINÉ, M. A. S. ; Carpita NC. Mixed Linkage (1→3),(1→4)-β- d -Glucans of Grasses. Cereal Chemistry, Saint Paul. v. 81, n. 1, p. 115-127, 2004. Qualis: Não identificado (CEREAL CHEMISTRY, SAINT PAUL)
5.	Carraro, D. M. ; Sredni, S.T. ; Maschietto, M. ; CASTRO, N. P. ; De Camargo, B. ; BRENTANI, H. P.. Applications of Microarray Technology in Clinic Oncology. Bioscience Journal (UFU. Impresso), Uberlândia, MG, Brazil. v. 20, n. Supplement, p. 53-58, 2004.Qualis: Não identificado (IMPRESSO), UBERLÂNDIA, MG, BRAZIL)
6.	CHIGANCAS, V. ; SARASIN, A. ; MENCK CF. CPD-photolyase adenovirus-mediated gene transfer in normal and DNA-repair-deficient human cells. Journal of Cell Science, England. v. 117, p. 3579-3592, 2004. Qualis: Não identificado (JOURNAL OF CELL SCIENCE, ENGLAND)
7.	DEMARCO, R. ; KOWALTOWSKI, A. T. ; MACHADO, A. A. ; SOARES, M. B. ; GARGIONI, C. ; KAWANO, T. ; RODRIGUES, V. ; MADEIRA, A. M. B. N. ; Wilson, R. A. ; MENCK, C. F. M. ; SETUBAL, J. C. ; DIAS-NETO, E. ; LEITE, L. C. C. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Saci-1, -2, and -3 and Perere, Four Novel Retrotransposons with High Transcriptional Activities from the Human Parasite Schistosoma mansoni. Journal of Virology, estados unidos. v. 78, n. 6, p. 2967-2978, 2004. Qualis: Não identificado (JOURNAL OF VIROLOGY, ESTADOS UNIDOS)
8.	FERNANDEZ, S. ; KATSUYAMA, A. M. ; KASHIWABARA, A. Y. ; MADEIRA, A. M. B. N. ; DURHAM, A. M. ; GRUBER, A.. Characterization of SCAR markers of spp. of domestic fowl and construction of a public relational database (The SCARdb). FEMS MICROBIOLOGY LETTERS, Estados Unidos. v. 238, n. 1, p. 183-188, 2004. Qualis: Não identificado (OF DOMESTIC FOWL AND CONSTRUCTION OF A PUBLIC RELATIONAL DATABASE . FEMS MICROBIOLOGY LETTERS, ESTADOS UNIDOS)
9.	FerrariI, D. V. ; Sameshima, K. ; Costa Filho, O. A. ; Bevilacqua, M. C.. A telemetria de respostas neurais no sistema de implante coclear multicanal nucleus 24: revisão da literatura. Revista Brasileira de Otorrinolaringologia (Impresso), São Paulo, SP. v. 70, n. 1, p. 112-118, 2004. Qualis: Não identificado (REVISTA BRASILEIRA DE OTORRINOLARINGOLOGIA , SÃO PAULO, SP)
10.	FIETTO, JULIANA L.R. ; DEMARCO, Ricardo ; NASCIMENTO, IVAN P. ; CASTRO, IESO M. ; CARVALHO, TÉCIA M.U. ; DE SOUZA, WANDERLEY ; Bahia, Maria T. ; ALVES, MARIA J.M. ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Characterization and immunolocalization of an NTP diphosphohydrolase of Trypanosoma cruzi. Biochemical and Biophysical Research Communications (Print). v. 316, p. 454-460, 2004. Qualis: A3
11.	HASHIMOTO, R. F.; KIM, S. ; SHMULEVICH, Ilya ; ZHANG, Wei ; BITTNER, M. L. ; DOUGHERTY, E. R.. Growing Genetic Regulatory Networks from Seed Genes. Bioinformatics (Oxford), Grã-Bretanha. v. 20, n. 8, p. 1241-1247, 2004. Qualis: Não identificado (BIOINFORMATICS , GRÃ-BRETANHA)
12.	HATANAKA, E. ; FURLANETO, C. J. ; RIBEIRO, F. P. ; SOUZA, G. M. ; CAMPA, A.. Serum amyloid A-induced mRNA expression and release of tumor necrosis factor-alpha (TNF-α) in human neutrophils. IMMUNOLOGY LETTERS. v. 91, p. 33-37, 2004. Qualis: A4
13.	HÜNEMEIER, T.; Chies, JAB ; NARDI, N. B. ; CRUZ, I. M. ; PERES, A.. T-cell receptor BV gene segment polymorphisms in healthy elderly individuals from the south of Brazil.. European Journal of Immunogenetics, Inglaterra. v. 31(2), p. 77-81, 2004.Qualis: Não identificado (EUROPEAN JOURNAL OF IMMUNOGENETICS, INGLATERRA)
14.	JUNQUEIRA, A.C.M. ; LESSINGER, A.C. ; TORRES, T.T. ; VETTORE, A.L. ; SILVA, F.R. ; ARRUDA, P. ; AZEREDO-ESPIN, A.M.L.. The mitochondrial genome of the blowfly Chrysomya chloropyga (Diptera: Calliphoridae).. Gene (Amsterdam), Holanda. v. 339, p. 7-15, 2004. Qualis: Não identificado (GENE , HOLANDA)
15.	Kashima, Simone ; Roberto, Patrí­cia G. ; Soares, Andreimar M. ; Astolfi-Filho, Spartaco ; Pereira, José O. ; Giuliati, Silvana ; Jr., Milton Faria ; Xavier, Mauro A.S. ; Fontes, Marcos R.M. ; Giglio, José R. ; França, Suzelei C.. Analysis of Bothrops jararacussu venomous gland transcriptome focusing on structural and functional aspects11All sequence data reported in this paper will appear in the GenBank database under the following accession numbers: BOJU-I (AY 185200), BOJU-II (AY 185206), BOJU-III (AY 145836), BOJUMET-I (AY 55005), BOJUMET-II (AY 25584), BOJUMET-III (AY 258153), C-type lectin (AY 251283), serine-protease. Biochimie (Paris. Print). v. 86, p. 211-219, 2004. Qualis: Não identificado (PRINT))
16.	KOIDE, T.; da Silva Neto, J. F. ; Gomes, S. L. ; MARQUES, M. V.. Insertional transposon mutagenesis in the Xylella fastidiosa Citrus Variegated Chlorosis strain with transposome.. Current Microbiology. v. 48, p. 247-250, 2004. Qualis: B1
17.	KOIDE, T. ; ZAINI, P. A. ; MOREIRA, L. M. ; VENCIO, R. Z. N. ; MATSUKUMA, A. Y. ; DURHAM, A. M. ; TEIXEIRA, D. C. ; EL-DORRY, H. ; MONTEIRO, P. B. ; DA SILVA, A. C. R. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; da SILVA, A. M. ; GOMES, S. L.. DNA microarray-based genome comparison of a pathogenic and a nonpathogenic strain of Xylella fastidiosa delineates genes important for bacterial virulence.. Journal of Bacteriology (Print). v. 186, p. 5442-5449, 2004. Qualis: A3
18.	LIMA, D. U. DE ; Loh, W. ; BUCKERIDGE, M. S.. Xyloglucan?cellulose interaction depends on the sidechains and molecular weight of xyloglucan. Plant Physiology and Biochemistry (Paris), França. v. 42, n. 5, p. 389-394, 2004. Qualis: Não identificado (PLANT PHYSIOLOGY AND BIOCHEMISTRY , FRANÇA)
19.	LOURO, Rodrigo ; NAKAYA, Helder I. ; PAQUOLA, Apua C.m. ; MARTINS, Elizabeth A.l. ; DASILVA, Aline M. ; VERJOVSKI-ALMEIDA, Sergio ; REIS, EM. RASL11A, member of a novel small monomeric GTPase gene family, is differentially expressed in prostate tumors. Biochemical and Biophysical Research Communications, EUA. v. 316, n. 5, p. 618-627, 2004. Qualis: A3 (BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS)
20.	LOURO, Rodrigo ; NAKAYA, HELDER I. ; PAQUOLA, APUÃ C.M. ; MARTINS, ELIZABETH A.L. ; SILVA, ALINE M.DA ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S. ; Reis, Eduardo M.. RASL11A, member of a novel small monomeric GTPase gene family, is down-regulated in prostate tumors.. Biochemical and Biophysical Research Communications, Estados Unidos. v. 316, n. 3, p. 618-627, 2004. Qualis: A3 (BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS)
21.	Marchetto, M. C. N. ; MUOTRI, A. R. ; BURNS, D. ; FRIEDBERG, E. ; Menck, C. F. M.. Gene transduction in skin cells: Preventing cancer in xeroderma pigmentosum mice. PNAS. Proceedings of the National Academy of Sciences of the United States of America, Estados Unidos. v. 101, n. 51, p. 17759-17764, 2004. Qualis: A1 (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA)
22.	MAYWORM, M. A. S. ; Salatino A ; BUCKERIDGE, M. S.. Chemical composition of seeds of Peltophorum dubium Vog., a legume tree from the Brazilian Caatinga with potential for sustainable use of biodiversity in semi-arid regions. Hoehnea (São Paulo), São Paulo. v. 31, n. 2, p. 175-179, 2004.Qualis: Não identificado (HOEHNEA , SÃO PAULO)
23.	MENEZES, Luis F C ; CAI, Yiqiang ; NAGASAWA, Yasuyuki ; SILVA, Ana M G ; WATKINS, Mary Lou ; DA SILVA, A. M. ; SOMLO, Stefan ; WOODFORD, Lisa M Guay ; GERMINO, Gregory G ; ONUCHIC, Luiz F. Polyductin, the PKHD1 gene product, comprises isoforms expressed in plasma membrane, primary cilium and cytoplasm. Kidney International, Estados Unidos da América. v. 66, n. 4, p. 1345-1355, 2004. Qualis: Não identificado (KIDNEY INTERNATIONAL, ESTADOS UNIDOS DA AMÉRICA)
24.	MONTEIRO-VITORELLO, Claudia B. ; Camargo, Luis E. A. ; Van Sluys, Marie A. ; Kitajima, João P. ; Truffi, Daniela ; do Amaral, Alexandre M. ; Harakava, Ricardo ; de Oliveira, Julio C. F. ; Wood, Derek ; de Oliveira, Mariana C. ; Miyaki, Cristina ; Takita, Marco A. ; da Silva, Ana C. R. ; Furlan, Luis R. ; Carraro, Dirce M. ; Camarotte, Giovana ; Almeida, Nalvo F. ; Carrer, Helaine ; Coutinho, Luiz L. ; SETUBAL, J. C.. The genome sequence of the gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli. Molecular Plant-Microbe Interactions, United States. v. 17, n. 8, p. 827-836, 2004. Qualis: Não identificado (MOLECULAR PLANT-MICROBE INTERACTIONS, UNITED STATES)
25.	SETUBAL, J. C.; SILVA, Ana Claudia Rasera da ; ALMEIDA JR, Nalvo Franco de ; FERRO, Jesus ; FURLAN, Luiz Roberto ; MOREIRA, Leandro ; SOUZA, Robson de ; OLIVEIRA, Julio Cezar de. COMPARATIVE GENOMICS ANALYSES OF CITRUS-ASSOCIATED BACTERIA. Annual Review of Phytopathology (Print), Estados Unidos. v. 42, p. 163-184, 2004. Qualis: Não identificado (ANNUAL REVIEW OF PHYTOPATHOLOGY , ESTADOS UNIDOS)
26.	NASCIMENTO, A. L. T. O. ; KO, A. I. ; MARTINS, E. A. L. ; MONTEIRO-VITORELLO, C. B. ; HO, P. L. ; HAAKE, D. A. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S. ; HARTSKEERL, R. A. ; MARQUES, M. V. ; OLIVEIRA, M. C. ; MENCK, C. F. M. ; LEITE, L. C. C. ; CARRER, H. ; COUTINHO, L. L. ; DEGRAVE, W. M. ; DELLAGOSTIN, O. A. ; EL-DORRY, H. ; FERRO, E. S. ; FERRO, M. I. T.. Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis.. Journal of Bacteriology, estados unidos. v. 186, n. 7, p. 2164-2172, 2004. Qualis: Não identificado (JOURNAL OF BACTERIOLOGY, ESTADOS UNIDOS)
27.	SETUBAL, J. C.; NASCIMENTO, Ana Lucia Tabet ; VERJOVSKI-ALMEIDA, Sergio ; SLUYS, Marie Anne Van ; MONTEIRO-VITORELLO, Claudia B. ; CAMARGO, Luis Eduardo Aranha ; DIGIAMPIETRI, Luciano A. ; HARTSKEERL, Rudy ; HO, Paulo Lee ; MARQUES, Marilis ; OLIVEIRA, Mariana Cabral de ; HAAKE, David ; MARTINS, Elizabeth. Genome features of Leptospira interrogans serovar Copenhageni.. Brazilian Journal of Medical and Biological Research. v. 37, n. 4, p. 459-477, 2004. Qualis: A4
28.	OIKAWA, M. K. ; BROINIZI, M. E. ; DERMAGOS, A. ; ARMELIN, H. A. ; FERREIRA, J. E.. GenFlow: generic flow for integration, management and analysis of molecular biology data. GENETICS AND MOLECULAR BIOLOGY, http://www.scielo.br/. v. 27, n. 4, p. 691-695, 2004. Qualis: Não identificado (GENETICS AND MOLECULAR BIOLOGY, HTTP://WWW.SCIELO.BR/)
29.	PINHEIRO, M. ; GALHARDO, R. ; LAGE, C. ; LIMA-BESSA, K. ; AIRES, K. ; MENCK CF. Different patterns of evolution for duplicated DNA repair genes in bacteria of the Xanthomonadales group. BMC Evolutionary Biology (Online), Inglaterra. v. 4, n. 1, p. 29-291, 2004. Qualis: Não identificado (BMC EVOLUTIONARY BIOLOGY , INGLATERRA)
30.	REIS, EM; NAKAYA, Helder Ikemoto ; LOURO, Rodrigo ; CANAVEZ, Flavio Canela ; FLATSCHART, Áurea V F ; ALMEIDA, Giulliana Tessarin ; EGIDIO, Camila Moura ; PAQUOLA, Apuã C M ; MACHADO, Abimael A ; FESTA, Fernanda ; YAMAMOTO, Denise ; ALVARENGA, Renato ; DASILVA, Camille C. ; BRITO, Glauber C. ; SIMON, Sérgio D. ; MOREIRA-FILHO, Carlos Alberto ; LEITE, Katia R. ; CAMARA-LOPES, Luiz H. ; CAMPOS, Franz S. ; GIMBA, Etel. Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer. Oncogene (Basingstoke), England. v. 23, n. 39, p. 6684-6692, 2004. Qualis: Não identificado (ONCOGENE , ENGLAND)
31.	ROSSI, M. ; ARAÚJO, P. G. ; JESUS, Erika Maria de ; VARANI, A. M. ; SLUYS MAV.. Comparative analysis of sugarcane Mutator-like transposases. Molecular Genetics and Genomics. v. 272, p. 194-203, 2004. Qualis: A4
32.	SAKABE, N. J. ; VIBRANOVSKI, M. D. ; de SOUZA, S. J.. A bioinformatics analysis of alternative exon usage in human genes coding for extracellular matrix proteins. Genetics and Molecular Research, Brasil. v. 3, n. 4, p. 532-544, 2004.Qualis: Não identificado (GENETICS AND MOLECULAR RESEARCH, BRASIL)
33.	Santos HP ; BUCKERIDGE, M. S.. The role of the storage carbon of cotyledons in the establishment of seedlings of Hymenaea courbaril L. under different light conditions. Annals of Botany, Bristol. v. 94, n. 6, p. 819-830, 2004. Qualis: Não identificado (ANNALS OF BOTANY, BRISTOL)
34.	SANTOS, H. P. DOS ; Purgatto, E. ; Mercier, H. ; BUCKERIDGE, M. S.. The Control of Storage Xyloglucan Mobilisation in Cotyledons of Hymenaea courbaril L.. PLANT PHYSIOLOGY, Estados Unidos. v. 135, n. 5, p. 287-299, 2004. Qualis: Não identificado (PLANT PHYSIOLOGY, ESTADOS UNIDOS)
35.	SOLER, J. M. P.; ROSA, F. H. F. P. ; CHIAVEGATTO, S. ; ANEAS, I. ; KRIEGER, J. E.. Use of Splines for Normalization of Microarray Gene Expression Data. Bioscience Journal, Especial,. p. 101-116, 2004.Qualis: Não identificado (BIOSCIENCE JOURNAL, ESPECIAL,)
36.	SOUZA, G. M. ; BUCKERIDGE, M. S.. Sistemas complexos: novas formas de ver a Botânica. Brazilian Journal of Botany, São Paulo. v. 27, n. 3, p. 407-419, 2004. Qualis: Não identificado (BRAZILIAN JOURNAL OF BOTANY, SÃO PAULO)
37.	The Ludwig_FAPESP Transcript Finishing Initiative ; SOGAYAR, M. C. ; CAMARGO, A. A. ; Giuliatti, S.. A Transcript Finishing Initiative for Closing Gaps in the Human Transcriptome. Genome Research. v. 14, p. 1413-1423, 2004. Qualis: A1
38.	TORRES, T.T.; BRONDANI, R.P.V. ; GARCIA, J.E. ; AZEREDO-ESPIN, A.M.L.. Isolation and characterization of microsatellite markers in the New World screw-worm Cochliomyia hominivorax (Diptera: Calliphoridae). Molecular Ecology Notes. v. 4, p. 182-184, 2004. Qualis: Não identificado (MOLECULAR ECOLOGY NOTES)
39.	Verjovski-Almeida, S.; DEMARCO, Ricardo. Genoma contra a esquistossomose. Scientific American Brasil, São Paulo. v. 28, p. 54-61, 2004.Qualis: Não identificado (SCIENTIFIC AMERICAN BRASIL, SÃO PAULO)
40.	Verjovski-Almeida, S.; Verjovski-Almeida, Sergio ; LEITE, LUCIANA C.C. ; DIAS-NETO, EMMANUEL ; MENCK, CARLOS F.M. ; WILSON, R.ALAN. Schistosome transcriptome: insights and perspectives for functional genomics. Trends in Parasitology, England. v. 20, n. 7, p. 304-308, 2004. Qualis: Não identificado (TRENDS IN PARASITOLOGY, ENGLAND)
41.	VINCENTZ, Michel ; CARA, F A ; OKURA, V K ; SILVA, F R da ; et al ; SLUYS MAV. ; NOBREGA, Francisco Gorgonio da ; ARRUDA, Paulo ; MENCK, Carlos Frederico Martins. Evaluation of monocot and eudicot divergence using the sugarcane transcriptome.. Plant Physiology (Bethesda), Estados Unidos. v. 134, n. 3, p. 951-959, 2004. Qualis: Não identificado (PLANT PHYSIOLOGY , ESTADOS UNIDOS)
42.	VÊNCIO, R. Z. N. ; SAMAIA, H. B. ; PATRÃO, D. F. C. ; PEREIRA, C. A. B.. Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE). BMC Bioinformatics. v. 31, n. 5, p. 119, 2004. Qualis: A1
43.	XU, PING ; WIDMER, GIOVANNI ; WANG, YINGPING ; OZAKI, LUIZ S. ; Alves, Joao M. ; Serrano, Myrna G. ; PUIU, DANIELA ; MANQUE, PATRICIO ; AKIYOSHI, DONNA ; MACKEY, AARON J. ; PEARSON, WILLIAM R. ; DEAR, PAUL H. ; BANKIER, ALAN T. ; PETERSON, DARRELL L. ; ABRAHAMSEN, MITCHELL S. ; KAPUR, VIVEK ; TZIPORI, SAUL ; Buck, Gregory A.. The genome of Cryptosporidium hominis. Nature (London). v. 431, p. 1107-1112, 2004. Qualis: A1

2003

1.	ANDRIOLI, Luiz Paulo M. ; ZAINI, Paulo A. ; Viviani W ; DA SILVA, A. M.. Dictyostelium discoideum protein phosphatase-1 catalytic subunit exhibits distinct biochemical properties. Biochemical Journal (London. 1984). v. 373, n. 3, p. 703-711, 2003. Qualis: Não identificado (1984))
2.	CARVALHO, A. B. ; VIBRANOVSKI, M. D. ; CARLSON, J. W. ; CELNIKER, S. E. ; HOSKINS, R. A. ; RUBIN, G. M. ; SUTTON, G. ; ADAMS, M. D. ; MYERS, E. W. ; CLARK, A. G.. Y chromosome and other heterochromatic sequences of the Drosophila melanogaster genome: how far can we go?. Genetica (The Hague). v. 117, p. 227-237, 2003.Qualis: A3
3.	CARVALHO, H. ; COSTA, R. M. A. ; CHIGANCAS, V. ; BRUMATTI, G. P. ; AMARANTES-MENDES, G. ; SARASIN, A. ; MENCK CF. The effect of cell confluence on ultraviolet light apoptotic responses in DNA repair-deficient cells. Mutation Research, Netherlands. v. 544, p. 159-166, 2003. Qualis: Não identificado (MUTATION RESEARCH, NETHERLANDS)
4.	CHABREGAS, S. M. ; LUCHE, D. D. ; MENCK, Carlos Frederico Martins ; SLUYS MAV. ; SILVA FILHO, M. C.. Differential usage of two in-frame translational start codons regulates subcellular localization of Arabidopsis thaliana THI1. Journal of Cell Science, England. v. 116, p. 285-291, 2003. Qualis: Não identificado (JOURNAL OF CELL SCIENCE, ENGLAND)
5.	COSTA, R. M. A. ; CHIGANCAS, V. ; GALHARDO, R. ; CARVALHO, H. ; MENCK CF. The eukaryotic nucleotide excision repair pathway. Biochimie (Paris), France. v. 85, n. 11, p. 1083-1099, 2003. Qualis: Não identificado (BIOCHIMIE , FRANCE)
6.	DEGASPERI, M. I. ; ITAYA, N. M. ; BUCKERIDGE, M. S. ; FIGUEIREDO-RIBEIRO, R. C. L.. Fructan degradation and hydrolytic activity in tuberous roots of Viguiera discolor Baker (Asteraceae), a herbaceous species from the cerrado. Brazilian Journal of Botany, São Paulo. v. 26, n. 1, p. 11-21, 2003. Qualis: Não identificado (BRAZILIAN JOURNAL OF BOTANY, SÃO PAULO)
7.	DEMARCO, Ricardo ; KOWALTOWSKI, ANDRE T ; MORTARA, Renato A ; Verjovski-Almeida, Sergio ; Verjovski-Almeida, S.. Molecular characterization and immunolocalization of Schistosoma mansoni ATP-diphosphohydrolase. Biochemical and Biophysical Research Communications (Print). v. 307, p. 831-838, 2003. Qualis: A3
8.	Diego, V.P. ; Almasy, L. ; Dyer, T.D. ; SOLER, J. M. P. ; BLANGERO, J.. Strategy and model building in the fourth dimention: A null model for genotype x age interaction as a gaussian stationary stochastic process. BMC Genetic. 2003.Qualis: A3 (BMC GENETICS)
9.	Digiampietri, Luciano A ; MEDEIROS, Claudia Maria Bauzer ; Setubal, João C.. A data model for comparative genomics. Revista Tecnologia da Informação. v. 3, p. 35-40, 2003.Qualis: Não identificado (REVISTA TECNOLOGIA DA INFORMAÇÃO)
10.	HASHIMOTO, R. F.; BARRERA, J.. A Greedy Algorithm for Decomposing Convex Structuring Elements. Journal of Mathematical Imaging and Vision, USA. v. 18, n. 3, p. 269-289, 2003. Qualis: A1 (JOURNAL OF MATHEMATICAL IMAGING AND VISION)
11.	HASHIMOTO, R. F.; DOUGHERTY, E. R. ; Marcel Brun ; Zheng-Zheng Zhou ; BITTNER, M. L. ; TRENT, J. M.. Efficient Selection of Feature Sets Possessing High Coefficients of Determination Based on Incremental Determinations. Signal Processing. v. 83, n. 4, p. 695-712, 2003. Qualis: A1
12.	Lima, D U ; Oliveira, R.C. ; BUCKERIDGE, M. S.. Seed storage hemicelluloses as wet-end additives in papermaking. Carbohydrate Polymers, Irlanda. v. 52, n. 4, p. 367-373, 2003. Qualis: Não identificado (CARBOHYDRATE POLYMERS, IRLANDA)
13.	MADEIRA, L. ; DEMARCO, R. ; GAZARINI, M. ; Verjovski-Almeida, S. ; GARCIA, C.. Human Malaria Parasites Display a Receptor for Activated C Kinase (RACK) Ortholog. Biochemical and Biophysical Research Communications (Print), USA. v. 306, p. 995-1001, 2003.Qualis: A3 (BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS)
14.	Merino, Emilio F ; Fernandez-Becerra, Carmen ; Madeira, Alda MBN ; MACHADO, Ariane L ; Durham, Alan ; Gruber, Arthur ; Hall, Neil ; del Portillo, Hernando A. Pilot survey of expressed sequence tags (ESTs) from the asexual blood stages of Plasmodium vivax in human patients. Malaria Journal (Online), Internet. v. 2, n. 21, p. 21, 2003. Qualis: Não identificado (MALARIA JOURNAL , INTERNET)
15.	PAPINITERZI, F. S. ; GALHARDO, R. ; FARIAS, L. P. ; MENCK, C. F. M. ; SLUYS MAV.. Point Mutation is Responsible for Arabidopsis tz-201 Mutant Phenotype Affecting Thiamin Biosynthesis.. Plant and Cell Physiology, Japan. v. 44, n. 8, p. 865-860, 2003.Qualis: Não identificado (PLANT AND CELL PHYSIOLOGY, JAPAN)
16.	PAQUOLA, A. C. M. ; NISHYIAMA, M. Y. ; REIS, E. M. ; da SILVA, A. M. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. ESTWeb: bioinformatics services for EST sequencing projects. Bioinformatics (Oxford. Print). v. 19, p. 1587-1588, 2003. Qualis: Não identificado (PRINT))
17.	PAQUOLA, A. C.M. ; MACHADO, A. A. ; REIS, E. M. ; da SILVA, A. M. ; Verjovski-Almeida, S. ; Verjovski-Almeida, S.. Zerg: a very fast BLAST parser library. Bioinformatics (Oxford. Print). v. 19, p. 1035-1036, 2003. Qualis: Não identificado (PRINT))
18.	PAQUOLA, Apua C. M. ; MACHADO, Abimael A ; REIS, EM ; SILVA, Aline M. da ; VERJOVSKI-ALMEIDA, Sergio. Zerg: a very fast BLAST parser library. Bioinformatics (Oxford), England. v. 19, n. 8, p. 1035-1036, 2003. Qualis: Não identificado (BIOINFORMATICS , ENGLAND)
19.	PIAZZA, J. P. ; Setubal, João C. New ways for automatic detection of contaminants in EST projects. Revista Tecnologia da Informação. v. 3, p. 36-41, 2003.Qualis: Não identificado (REVISTA TECNOLOGIA DA INFORMAÇÃO)
20.	RIBEIRO, F. P. ; FURLANETO, C. J. ; RIBEIRO, W. B. ; SOUZA, G. M. ; CASSATELA, M. ; CAMPA, A.. mRNA expression and release of interleukin-8 induced by serum amyloid A in neutrophils and monocytes. MEDIATORS OF INFLAMMATION. v. 12, p. 173-178, 2003. Qualis: A3
21.	ROSSI, M. ; ARAÚJO, P. G. ; PAULET, F. ; GARSMEUR, O. ; VM Dias ; CHEN, H. ; SLUYS MAV. ; DHONT, A.. Genomic distribution and characterization of EST-derived resistance gene analogs (RGAs) in sugarcane.. Molecular Genetics and Genomics. v. 269, n. 3, p. 406-419, 2003. Qualis: A4
22.	SAKABE, N. J. ; SOUZA, J. E. S. ; GALANTE, P. A. F. ; OLIVEIR, P. S. L. ; PASSETTI, Fábio ; SAMAIA, H. B. ; OSÓRIO, E. C. ; ZAIATS, A. C. ; LEERKES, M. R. ; KITAJIMA, J. P. ; BRENTANI, R. R. ; STRAUSBERG, R. L. ; SIMPSON, A. J. G. ; DE SOUZA, S. J.. Orestes are enriched in exon variants affecting the encoded proteins. Comptes Rendus. Biologies. v. 326, p. 979-985, 2003. Qualis: Não identificado (BIOLOGIES)
23.	BRENTANI, Helena ; CABALLERO, Otavia L. ; CAMARGO, Anamaria A. ; DASILVA, Aline M. ; SILVA, JR., Wilson Araujo da ; DIAS-NETO, Emmanuel ; GRIVET, Marco ; GRUBER, Arthur ; GUIMARAES, Pedro Edson Moreira ; ISELI, Christian ; JONGENEEL, Victor ; KELSO, Janet ; NAGAI, Maria Aparecida ; OJOPI, Elida P.b ; OSORIO, Elisson C. ; REIS, EM ; RIGGINS, Gregory J. ; SIMPSON, Andrew John George ; SOUZA, Sandro de ; STEVENSON, Brian J.. The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags. PNAS. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, EUA. v. 100, n. 23, p. 13418-13423, 2003. Qualis: A1 (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA)
24.	SHMULEVICH, Ilya ; GLUHOVSKY, Ilya ; HASHIMOTO, R. F. ; DOUGHERTY, E. R. ; ZHANG, Wei. Steady-State Analysis of Genetic Regulatory Networks Modelled by Probabilistic Boolean Networks. Comparative and Functional Genomics. v. 4, p. 601-608, 2003. Qualis: Não identificado (COMPARATIVE AND FUNCTIONAL GENOMICS)
25.	SLUYS MAV.; OLIVEIRA, Mariana Cabral de ; MONTEIROVITORELLO, C B ; MIYAKI, C. Y. ; FURLAN, L. R. ; CAMARGO, L E A ; SILVA, A. C. R. ; MOON, D. H. ; TAKITA, M. A. ; LEMOS, E. G. M. ; MACHADO, M. A. ; FERRO, M. I. T. ; SILVA, F R da ; GOLDMAN, M. H. S. ; GOLDMAN, G. H. ; LEMOS, M. V. F. ; DORRY, H. E. ; TSAI, S. M. ; CARRER, H. ; CARRARO, D. M.. Comparative Analyses of the Complete Genome Sequences of Pierce's Disease and Citrus Variegated Chlorosis Strains of Xylella fastidiosa. Journal of Bacteriology, EUA. v. 185, n. 3, p. 1018-1026, 2003. Qualis: A3 (JOURNAL OF BACTERIOLOGY)
26.	SOLER, J. M. P.; BLANGERO, J.. Longitudinal Familial Analysis of Blood Pressure Involving Parametric (Co)variance Functions. BMC Genetic. 2003.Qualis: A3 (BMC GENETICS)
27.	SUDA, C. N. K. ; BUCKERIDGE, M. S. ; Giorgini, J.. Cell wall hydrolases in the seeds of Euphorbia heterophylla L. during germination and early seedling development.. Revista Brasileira de Fisiologia Vegetal, Campinas. v. 15, n. 3, p. 135-143, 2003. Qualis: Não identificado (REVISTA BRASILEIRA DE FISIOLOGIA VEGETAL, CAMPINAS)
28.	TINÉ, M. A. S. ; Lima, D U ; BUCKERIDGE, M. S.. Galactose branching modulates the action of cellulase on seed storage xyloglucans. Carbohydrate Polymers, Irlanda. v. 52, p. 135-141, 2003. Qualis: Não identificado (CARBOHYDRATE POLYMERS, IRLANDA)
29.	VERJOVSKI-ALMEIDA, Sergio ; DEMARCO, Ricardo ; MARTINS, Elizabeth A.l. ; GUIMARÃES, Pedro E.m ; OJOPI, Elida P.b ; PAQUOLA, Apua C. M. ; PIAZZA, João Paulo ; NISHYIAMA JR., Milton Yutaka ; KITAJIMA, João Paulo ; ADAMSON, Rachel E. ; ASHTON, Peter D ; BONALDO, Maria F ; COULSON, Patricia S ; DILLON, Gary P ; FARIAS, Leonardo P ; GREGORIO, Sheila P ; HO, Paulo L ; LEITE, Ricardo A ; MAQUIAS, Cosme C ; REIS, EM. Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni. Nature Genetics, Grã-Bretanha. v. 35, n. 2, p. 148-157, 2003. Qualis: Não identificado (NATURE GENETICS, GRÃ-BRETANHA)
30.	VETTORE, A. L. ; da SILVA, F. R. ; KEMPER, E. L. ; SOUZA, G. M. ; DA SILVA, A. M. ; FERRO, M. I. T. ; HENRIQUE-SILVA, F. ; GIGLIOTI, E. A. ; LEMOS, M. V. F. ; Coutinho, L. L. ; NOBREGA, M. P. ; Carrer, H. ; FRANCA, S. C. ; BACCI, M. ; GOLDMAN, M. H. S. ; GOMES, S. L. ; NUNES, L. R. ; Camargo, L. E. A. ; SIQUEIRA, W. J. ; VAN SLUYS, M. A.. Analysis and functional annotation of an expressed sequence tag collection for tropical crop sugarcane.. Genome Research, United States. v. 13, n. 12, p. 2725-2735, 2003. Qualis: Não identificado (GENOME RESEARCH, UNITED STATES)
31.	VÊNCIO, R. Z. N. ; SAMAIA, H. B. ; PEREIRA, C. A. B.. Using credibility intervals instead of hypothesis tests in SAGE analysis. BMC Bioinformatics. v. 19, p. 2461-2464, 2003. Qualis: A1
32.	Zaidan, E. ; Sameshima, K.. Desenvolvimento de listas de palavras foneticamente balanceadas para avaliação do processamento auditivo.. Pró-Fono, Barueri, SP. v. 15, n. 3, p. 307-316, 2003.Qualis: Não identificado (PRÓ-FONO, BARUERI, SP)

2002

1.	AIDAR, M. P. M. ; COSTA, P. F. ; MARTINEZ, C. A. ; DIETRICH, S. M. C. ; BUCKERIDGE, M. S.. Effect of atmospheric CO2 enrichment on the establishment of seedlings of jatobá, Hymenaea courbaril L. (Leguminosae, Caesalpinioideae). Biota Neotropica, Campinas. v. 2, n. 1, 2002.Qualis: Não identificado (BIOTA NEOTROPICA, CAMPINAS)
2.	BUCKERIDGE, M. S.; AIDAR, M. P. M.. Carbon sequestration in the rain forest: alternatives using environmentally friendly biotechnology. Biota Neotropica, Campinas. v. 2, n. 2, 2002.Qualis: Não identificado (BIOTA NEOTROPICA, CAMPINAS)
3.	CAVALCANTE, A. ; MASCIO, P. ; MENCK CF ; L.F. Agnez-Lima. Cytotoxicity and mutagenesis induced by singlet oxygen in wild type and DNA repair deficient Escherichia coli strains.. DNA Repair, Netherlands. v. 1, n. 12, p. 1051-1056, 2002. Qualis: Não identificado (DNA REPAIR, NETHERLANDS)
4.	CHIGANCAS, V. ; BATISTA, L. F. Z. ; BRUMATTI, G. P. ; AMARANTES-MENDES, G. ; YASUI, A. ; MENCK CF. Photorepair of RNA polymerase arrest and apoptosis after ultraviolet irradiation in normal and xpb deficient rodent cells.. Cell Death and Differentiation, England. v. 9, n. 10, p. 1099-1107, 2002.Qualis: Não identificado (CELL DEATH AND DIFFERENTIATION, ENGLAND)
5.	da Silva Neto, J ; KOIDE, T.. Site-directed gene disruption in Xylella fastidiosa. FEMS Microbiology Letters. v. 210, n. 1, p. 105-110, 2002. Qualis: B2
6.	da Silva, A. C. R. ; Ferro, J. A. ; Reinach, F. C. ; Farah, C. S. ; Furlan, L. R. ; Quaggio, R. B. ; Monteiro-Vitorello, C. B. ; Sluys, M. A. Van ; Almeida, N. F. ; Alves, L. M. C. ; do Amaral, A. M. ; Bertolini, M. C. ; Camargo, L. E. A. ; Camarotte, G. ; Cannavan, F. ; Cardozo, J. ; Chambergo, F. ; Ciapina, L. P. ; Cicarelli, R. M. B. ; de SOUZA, Robson Francisco. Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.. Nature (London), Estados Unidos. v. 417, n. 6887, p. 459-463, 2002. Qualis: Não identificado (NATURE , ESTADOS UNIDOS)
7.	Da SILVA, F. L. B.; BOGREN, D. ; SÖDERMAN, O. ; ÅKESSON, Torbjörn ; JÖNSSON, Bo. Titration of fatty acids solubilized in cationic, nonionic and anionic micelles. Theory and experiment.. Journal of Physical Chemistry B. v. 106, n. 13, p. 3515-3522, 2002. Qualis: A2
8.	FIETTO, J. L. R. ; DEMARCO, Ricardo ; Verjovski-Almeida, S.. Use of degenerate primers and touchdown PCR for construction of cDNA Libraries.. BioTechniques. v. 32, n. 6, p. 1404-1411, 2002.Qualis: A4
9.	FURLANETO, C. J. ; RIBEIRO, F. P. ; TANAKA, E. ; SOUZA, G. M. ; CASSATELA, M. ; CAMPA, A.. Apolipoproteins A-I and A-II downregulate neutrophil functions. Lipids. v. 37, p. 925-928, 2002. Qualis: B1
10.	HASHIMOTO, R. F.; BARRERA, J.. A Note on Park and Chin´s Algorithm. IEEE Transactions on Pattern Analysis and Machine Intelligence. v. 24, n. 1, p. 139-144, 2002. Qualis: Não identificado (IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE)
11.	HIRATA JR., R. ; BARRERA, J. ; HASHIMOTO, R. F. ; DANTAS, D. O. ; ESTEVES, G. H.. Segmentation of Microarray Images by Mathematical Morphology. Real-Time Imaging, USA. v. 8, n. 6, p. 491-505, 2002. Qualis: Não identificado (REAL-TIME IMAGING, USA)
12.	ISELI, C. ; DE SOUZA, S. J. ; SAMAIA, H. B. ; STEVENSON, B. J. ; CAMARGO, A. A. ; STRAUSBERG, R. L. ; BUETOW, K. H. ; SIMPSON, A. J. G. ; JONGENEEL, C. V.. Long-range heterogeneity at the 3´ end of human mRNAs. Genome Research. v. 12, p. 1068-1074, 2002. Qualis: A1
13.	JORGE, S. A. C. ; MENCK CF ; SIES, H. ; OSBORNE, M. R. ; PHILLIPS, D. H. ; SARASIN, A. ; STARY, A.. Mutagenic fingerprint of ozone in human cells.. DNA Repair, Netherlands. v. 1, n. 5, p. 369-378, 2002. Qualis: Não identificado (DNA REPAIR, NETHERLANDS)
14.	MAGALHAES, G. ; MUOTRI, A. R. ; MARCHETTO, M. ; MENCK CF ; VENTURA, A.. An adenovirus vector containing the suicide gene thymidine kinase for a broad application in cancer gene therapy.. Memórias do Instituto Oswaldo Cruz, Brazil. v. 97, n. 4, p. 547-552, 2002.Qualis: Não identificado (MEMÓRIAS DO INSTITUTO OSWALDO CRUZ, BRAZIL)
15.	MEIDANIS, J. ; BRAGA, M. ; Verjovski-Almeida, S.. Whole Genome Analysis of Transporters in the plant pathogen Xylella fastidiosa. Microbiology and Molecular Biology Reviews. v. 66, n. 6, p. 272-299, 2002.Qualis: Não identificado (MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS)
16.	MENCK CF. Shining light on photolyases. Nature Genetics, United States. v. 32, p. 338-339, 2002. Qualis: Não identificado (NATURE GENETICS, UNITED STATES)
17.	MUOTRI, A. R. ; MARCHETTO, M. ; SUZUKI, M. F. ; OKAZAKI, K. ; LOTFI, C. F. P. ; BRUMATTI, G. P. ; AMARANTES-MENDES, G. ; MENCK CF. Low amounts of the DNA repair XPA protein are sufficient to recover UV-resistance.. Carcinogenesis (New York), England. v. 23, n. 6, p. 1039-1046, 2002.Qualis: Não identificado (CARCINOGENESIS , ENGLAND)
18.	MUOTRI, A. R. ; MARCHETTO, M. ; ZERBINI, L. ; LIBERMANN, T. ; VENTURA, A. ; SARASIN, A. ; MENCK CF. Complementation of the DNA repair deficiency in human xeroderma pigmentosum group A and C cells by recombinant adenovirus-mediated gene transfer.. Human Gene Therapy, United States. v. 13, n. 15, p. 1833-1844, 2002.Qualis: Não identificado (HUMAN GENE THERAPY, UNITED STATES)
19.	MUOTRI, A. R. ; MARCHETTO, M. C. ; SUZUKI, M. F. ; OKAZAKI, K. ; LOTFI, C. F. ; BRUMATTI, G. ; AMARANTEMENDES, G. P. ; MENCK CF. Low amounts of the DNA repair XPA progein are sufficient to recover UV-resistance. Carcinogenesis (New York. Print). v. 23, p. 1039-1046, 2002.Qualis: Não identificado (PRINT))
20.	POTOMATI, A. ; BUCKERIDGE, M. S.. Effect of abscisic acid on the mobilisation of galactomannan and embryo development of Sesbania virgata (Cav.) Pers. (Leguminosae - Faboideae). Brazilian Journal of Botany, São Paulo. v. 25, n. 3, p. 303-310, 2002. Qualis: Não identificado (BRAZILIAN JOURNAL OF BOTANY, SÃO PAULO)
21.	SETUBAL, J. C.; SILVA, Ana Claudia Rasera da ; SIMPSON, A. J. G. ; KITAJIMA, Joao Paulo ; FERRO, Jesus ; SLUYS, Marie Anne Van ; MONTEIRO-VITORELLO, Claudia B. ; CAMARGO, Luis Eduardo Aranha ; MENCK, Carlos F. M. ; OLIVEIRA, Mariana Cabral de. C OMPARATIVE G ENOMIC A NALYSIS OF P LANT -A SSOCIATED B ACTERIA. Annual Review of Phytopathology (Print), EUA. v. 40, p. 169-189, 2002. Qualis: A1 (ANNUAL REVIEW OF PHYTOPATHOLOGY)
22.	SLUYS MAV.; VITORELLO, C. B. M. ; CAMARGO, L E A ; MENCK, Carlos Frederico Martins ; SILVA, A. C. R. ; FERRO, J. A. ; OLIVEIRA, Mariana Cabral de ; SETUBAL, J. C. ; KITAJIMA, J. P. ; SIMPSON, A. J.. Comparative genomic analysis of plant-associated bacteria.. Annual Review of Phytopathology (Print), Estados Unidos. v. 40, p. 169-189, 2002. Qualis: Não identificado (ANNUAL REVIEW OF PHYTOPATHOLOGY , ESTADOS UNIDOS)
23.	STANCATO, G. C. ; MAZZAFERA, P. ; BUCKERIDGE, M. S.. Effects of light stress on the growth of the epiphytic orchid Cattleya forbesii Lindl. X Laelia tenebrosa Rolfe. Brazilian Journal of Botany, São Paulo. v. 25, n. 2, p. 229-235, 2002. Qualis: Não identificado (BRAZILIAN JOURNAL OF BOTANY, SÃO PAULO)
24.	TAMINATO, A. ; BAGATTINI, R. ; GORJAO, R. ; CHEN, G. ; KUSPA, A. ; SOUZA, G. M.. A role for YakA, cAMP and PKA in the regulation of stress responses of Dictyostelium discoideum cells. Molecular Biology of the Cell. v. 13, p. 2266-2275, 2002.Qualis: A2

2001

1.	ARAÚJO, P. G. ; CASACUCERTA, J. M. ; COSTA, A. P. P. ; HASHIMOTO, R. Y. ; GRANDBASTIEN, M. A. ; SLUYS MAV.. Retrolyc1 subfamilies defined by different U3 LTR regulatory regions in the Lycopersicon genus. Molecular and General Genetics. v. 266, n. 1, p. 35-41, 2001. Qualis: Não identificado (MOLECULAR AND GENERAL GENETICS)
2.	Baccalá, L. A. ; Sameshima, K.. Partial directed coherence a new concept in neural structure determination. Biological Cybernetics, Berlim. v. 84, n. 6, p. 463-474, 2001. Qualis: Não identificado (BIOLOGICAL CYBERNETICS, BERLIM)
3.	Baccalá, L. A. ; Sameshima, Koichi. Overcoming the limitations of correlation analyais for many simultaneously processed neural structures. Progress in Brain Research. v. 130, p. 33-47, 2001. Qualis: A4
4.	BARRERA, J. ; HASHIMOTO, R. F.. Sup-Compact and Inf-Compact Representations of W-Operators. Fundamenta Informaticae. v. 45, n. 4, p. 283-294, 2001.Qualis: A2
5.	BUCKERIDGE, M. S.; Vergara C. ; Carpita NC. Insight into multi-site mechanisms of glycosyl transfer in (1,4)-beta-D-glycans provided by the cereal mixed-linkage (1,3),(1,4)-beta-D-glucan synthase. Phytochemistry. v. 57, p. 1045-1053, 2001. Qualis: A2
6.	CAMARGO, Anamaria A. ; SAMAIA, Helena Brentani ; DIAS-NETO, Emmanuel ; SIMÃO, Daniel F. ; MIGOTTO, Italo A. ; BRIONES, Marcelo R. S. ; COSTA, Fernando F. ; NAGAI, Maria Aparecida ; VERJOVSKI-ALMEIDA, Sergio ; ZAGO, Marco A. ; ANDRADE, Luis Eduardo C. ; CARRER, Helaine ; EL-DORRY, Hamza ; ESPREAFICO, Enilza M. ; HABR-GAMA, Angelita ; GIANNELLA-NETO, Daniel ; GOLDMAN, Gustavo H. ; GRUBER, Arthur ; HACKEL, Christine ; REIS, EM. The contribution of 700,000 ?ORF sequence tags? to the definition of the human transcriptome.. PNAS. Proceedings of the National Academy of Sciences of the United States of America, USA. v. 98, n. 21, p. 12103-12108, 2001. Qualis: A1 (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA)
7.	CAMARGO, A. A. ; NUNES, D. N. ; SAMAIA, H. B. ; LIU, L. ; COLLINS, V. P. ; SIMPSON, A. J. G. ; DIAS NETO, E.. Molecular characterization of DDX26, a human DEAD-box RNA helicase, located on chromosome 7p12. Brazilian Journal of Medical and Biological Research. v. 34, p. 1237-1245, 2001. Qualis: A4
8.	Carvalho P.G.B. ; Borgetti, F. ; BUCKERIDGE, M. S. ; Morhy, L. ; Fereira Filho, E.X.. Temperature-dependent germination and endo-beta-mannanase activity in sesame seeds. Revista Brasileira de Fisiologia Vegetal, Viçosa. v. 13, n. 2, p. 139-148, 2001. Qualis: Não identificado (REVISTA BRASILEIRA DE FISIOLOGIA VEGETAL, VIÇOSA)
9.	CHABREGAS, S. M. ; LUCHE, D. D. ; FARIAS, L. P. ; RIBEIRO, A. F. ; SLUYS MAV. ; MENCK, C. F. M. ; SILVA-FILHO, M. C.. Dual targetting properties of the N-terminal signal sequence of Arabidopsis thaliana THI1 protein to mitochondria and chloroplast. Plant Molecular Biology. v. 46, p. 639-650, 2001. Qualis: A1
10.	Charchat, H. ; Nitrini, R. ; Caramelli, P. ; Sameshima, Koichi. Investigação de Marcadores Clínicos dos Estágios Iniciais da Doença de Alzheimer com Testes Neuropsicológicos Computadorizados. Psicologia. Reflexão e Crítica, Porto Alegre, RS, Brasil. v. 14, n. 2, p. 305-316, 2001. Qualis: Não identificado (REFLEXÃO E CRÍTICA, PORTO ALEGRE, RS, BRASIL)
11.	COSTA, R. M. A. ; MORGANTE, P. G. ; BERRA, C. M. ; NAKABASHI, M. ; BRUNEAU, D. ; BOUCHEZ, D. ; SWEDER, K. ; M.A. VanSluys ; MENCK CF. The participation of AtXPB1, the XPB/RAD25 homologue gene from Arabidopsis thaliana, in DNA repair and plant development.. Plant J, Inglaterra. v. 28, n. 4, p. 385-395, 2001. Qualis: Não identificado (PLANT J, INGLATERRA)
12.	COSTA, R. M. A. ; LIMA, W. C. ; VOGEL, C. I. G. ; BERRA, C. M. ; LUCHE, D. D. ; MEDINA-SILVA, R. ; GALHARDO, R. ; MENCK CF ; OLIVEIRA, V. S.. DNA repair-related genes in sugarcane expressed sequence tags (ESTs).. Genetics and Molecular Biology, Ribeirão Preto. v. 24, n. 1-4, p. 131-140, 2001.Qualis: Não identificado (GENETICS AND MOLECULAR BIOLOGY, RIBEIRÃO PRETO)
13.	Da SILVA, F. L. B.; JÖNSSON, Bo ; PENFOLD, R.. A critical investigation of the Tanford-Kirkwood model by means of Monte Carlo simulations. Protein Science, Estados Unidos. v. 10, p. 1415-1425, 2001. Qualis: Não identificado (PROTEIN SCIENCE, ESTADOS UNIDOS)
14.	Da SILVA, F. L. B.; OLIVARES, Wilmer ; DEGREVE, L. ; ÅKESSON, Torbjörn. Application of a New Reverse Monte Carlo Algorithm to PolyatomicMolecular Systems I. Liquid water. Journal of Chemical Physics, Estados Unidos. v. 114, n. 2, p. 907-914, 2001. Qualis: Não identificado (JOURNAL OF CHEMICAL PHYSICS, ESTADOS UNIDOS)
15.	DOBO, B. A. ; CLARK, A. G. ; VIBRANOVSKI, M. D.. Identification of five new genes on the Y chromosome of Drosophila melanogaster. PNAS. Proceedings of the National Academy of Sciences of the United States of America, Estados Unidos. v. 98, n. 23, p. 13225-13230, 2001.Qualis: A1 (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA)
16.	DURAN, N. ; MENCK CF. Chomobacterium violaceum: a review on pharmacological and industrial perspectives.. Critical Reviews in Microbiology, Estados Unidos. v. 27, n. 3, p. 201-222, 2001.Qualis: Não identificado (CRITICAL REVIEWS IN MICROBIOLOGY, ESTADOS UNIDOS)
17.	Fanselow, E. E. ; SAMESHIMA, K. ; Baccalá, L. A. ; Nicolelis, M. A. L.. Thalamic bursting in rats during different awake behavioral states. PNAS. Proceedings of the National Academy of Sciences of the United States of America, Nova Iorque. v. 98, n. 26, p. 15330-15335, 2001. Qualis: A1 (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA)
18.	FROHME, M. ; CAMARGO, A. ; CZINK, C. ; MATSUKUMA, A. ; SIMPSON, A. ; HOHEISEL, J. ; Verjovski-Almeida, S.. Directed gap closure in large scale sequencing projects. Genome Research, USA. v. 11, p. 901-903, 2001.Qualis: Não identificado (GENOME RESEARCH, USA)
19.	HASHIMOTO, R. F.; BARRERA, J.. From the Sup-Decomposition to Sequential Decompositions. Journal of Mathematical Imaging and Vision. v. 15, n. 3, p. 197-216, 2001. Qualis: A1
20.	L.F. Agnez-Lima ; P. DiMascio ; DEMPLE, B. ; MENCK CF. Singlet molecular oxygen triggers the soxRS regulon of Escherichia coli.. Biological Chemistry, Berlin, Alemanha. v. 382, p. 1071-1075, 2001.Qualis: Não identificado (BIOLOGICAL CHEMISTRY, BERLIN, ALEMANHA)
21.	L.F. Agnez-Lima ; R.L. Napolitano ; R.P. Fuchs ; P. DiMascio ; MUOTRI, A. R. ; MENCK CF. DNA repair and sequence context affect 1O2-induced mutagenesis in bacteria. Nucleic Acids Research, USA. v. 29, p. 2899-2903, 2001.Qualis: Não identificado (NUCLEIC ACIDS RESEARCH, USA)
22.	Lima, D U ; BUCKERIDGE, M. S.. Interaction between cellulose and storage xyloglucans: the influence of degree of galactosylation. Carbohydrate Polymers, Inglaterra. v. 46, n. 2, p. 157-163, 2001. Qualis: Não identificado (CARBOHYDRATE POLYMERS, INGLATERRA)
23.	Lima, D U ; Santos HP ; TINÉ, M. A. S. ; MOLLE, F. D. ; BUCKERIDGE, M. S.. Patterns of expression of cell wall related genes in sugar cane. GENETICS AND MOLECULAR BIOLOGY, Campinas. v. 24, n. 1, p. 191-198, 2001. Qualis: Não identificado (GENETICS AND MOLECULAR BIOLOGY, CAMPINAS)
24.	LIMA, W. C. ; MEDINA-SILVA, R. ; GALHARDO, R. ; MENCK CF. Distribution of DNA repair-related ESTs in sugarcane.. Genetics and Molecular Biology, EUA. v. 24, n. 1-4, p. 141-146, 2001. Qualis: A4 (GENETICS AND MOLECULAR BIOLOGY)
25.	MARCHETTO, M. ; MUOTRI, A. R. ; MAGALHAES, G. ; ZERBINI, L. ; LIBERMANN, T. ; VENTURA, A. ; MENCK CF. The EGFP recombinant adenovirus: an example of efficient gene delivery and expression in human cells.. Virus Reviews and Research, São Paulo. v. 6, p. 23-33, 2001.Qualis: Não identificado (VIRUS REVIEWS AND RESEARCH, SÃO PAULO)
26.	Marques, M ; DA SILVA, A. M. ; GOMES, Suely Lopes. Genetic Organization of Plasmid pXF51 from the Plant Pathogen Xylella fastidiosa. Plasmid (San Diego. Print). v. 45, n. 3, p. 184-199, 2001. Qualis: Não identificado (PRINT))
27.	MORGANTE, P. G. ; PERES, L. E. P. ; VECHI, C. ; KRAUS, J. ; SLUYS MAV.. Shoot regeneration capacity from roots and transgenic hairy roots of different tomato cultivars and wild related species.. Plant Cell, Tissue and Organ Culture. v. 65, p. 37-44, 2001.Qualis: A1
28.	PANEGASSI, V. R. ; SERRA, G. E. ; BUCKERIDGE, M. S.. Potencial tecnológico do galactomanano de sementes de faveiro (Dimorphandra mollis) para uso na indústria de alimentos. Revista Brasileira de Ciência e Tecnologia de Alimentos. Ciência e Tecnologia de Alimentos, Campinas. v. 20, n. 3, p. 406-415, 2001. Qualis: Não identificado (CIÊNCIA E TECNOLOGIA DE ALIMENTOS, CAMPINAS)
29.	PEREIRA, A. C. ; CUOCO, M. A. R. ; MOTA, G. F. ; SILVA, F. F. ; FREITAS, H. F. G. ; BOCCHI, E. A. ; SOLER, J. M. P. ; MANSUR, A. ; KRIEGER, J. E.. Hemochromatosis gene Cys282Ty mutation is associated with Ischemic, but not Non-Ischemic Heart Failure. The American Journal of Cardiology. v. 88, n. 4, p. 388-391, 2001.Qualis: A2
30.	RODRIGUES, L. ; LUZ, J. G. C. ; SOLER, J. M. P.. Ocorrência da mineralização do complexo do ligamento estilo-hioideo em acientes com disfunção da ATM e em indivíduos assintomáticos. Brazilian Oral Research. 2001.Qualis: A2
31.	ROSSI, M. ; ARAÚJO, P. G. ; SLUYS MAV.. Survey of transposable elements in sugarcane expressed sequence tags (ESTs). Genetics and Molecular Biology, Estados Unidos. v. 24, p. 147-154, 2001.Qualis: Não identificado (GENETICS AND MOLECULAR BIOLOGY, ESTADOS UNIDOS)
32.	S Chabregas ; LUCHE, D. D. ; LP Farias ; RIBEIRO, A. F. ; M.A. VanSluys ; MENCK CF ; MC Sliva-Filho. Dual targeting properties of the N-terminal sequence of Arabidopsis thaliana THI1 protein to mitochondria and chloroplasts. Plant Molecular Biology, USA. v. 46, p. 639-650, 2001. Qualis: A1 (PLANT MOLECULAR BIOLOGY)
33.	SALTINO, A. ; SALATINO, M. L. F. ; MELLOSILVA, R. ; SLUYS MAV. ; GIANNASI, D ; PRICE, R.A. Phylogenetic inference in Velloziaceae using chloroplast trnL-F sequences.. Systematic Botany. v. 26, p. 92-103, 2001.Qualis: A3
34.	SOUZA, Glaucia Mendes ; SIMÕES, Ana Carolina Quirino ; OLIVEIRA, Katia C. ; GARAY, H. M. ; FIORINI, Leonardo Costa ; GOMES, F. S. ; NISHIYAMA-JUNIOR, M. Y. ; DA SILVA, A. M.. The sugarcane signal transduction (SUCAST) catalogue: prospecting signal transduction in sugarcane.. Genetics and Molecular Biology. v. 24, n. 1-4, p. 25-34, 2001. Qualis: A4
35.	STANCATTO, J. ; MAZZAFERA, P. ; BUCKERIDGE, M. S.. Effect of a drought period on the mobilisation of non structural carbohydrates and water status in the epiphytic orchid Cattleya forbesii Lindl. X Laelia tenebrosa Rolfe.. Plant Physiology and Biochemistry (Paris), França. v. 39, n. 11, p. 1009-1016, 2001. Qualis: Não identificado (PLANT PHYSIOLOGY AND BIOCHEMISTRY , FRANÇA)
36.	WERNECK, R. ; SETUBAL, J. C.. Finding minimum congestion spanning trees. ACM Journal of Experimental Algorithmics. v. 6, p. 1-20, 2001.Qualis: Não identificado (ACM JOURNAL OF EXPERIMENTAL ALGORITHMICS)
37.	Wood, D. W. ; Setubal, J.C.. The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58. Science, USA. v. 294, p. 2317-2323, 2001. Qualis: Não identificado (SCIENCE, USA)

2000

1.	ALVES, J. M. P.; Gusmão, C.X. ; Teixeira, M. M. G. ; Freitas, D. ; Foronda, A.S. ; Affonso, H.T.. Random amplified polymorphic DNA profiles as a tool for the characterization of Brazilian keratitis isolates of the genus Acanthamoeba. Brazilian Journal of Medical and Biological Research (Impresso), Ribeirão Preto/SP. v. 33, n. 1, p. 19-26, 2000. Qualis: A4 (BRAZILIAN JOURNAL OF MEDICAL AND BIOLOGICAL RESEARCH)
2.	Borges ELB ; Borges RCG ; BUCKERIDGE, M. S.. Alterações nas composições de carboidratos e de ácidos graxos em semenes de jacarandá-da-bahia osmocondicionadas.. Revista Brasileira de Fisiologia Vegetal. v. 12, p. 10-16, 2000. Qualis: Não identificado (REVISTA BRASILEIRA DE FISIOLOGIA VEGETAL)
3.	BUCKERIDGE, M. S.; Lima, D U ; Santos HP ; TINÉ, M. A. S.. Polissacarídeos de reserva de parede celular em sementes, estrutura, metabolismo, funções e aspectos ecológicos. Revista Brasileira de Fisiologia Vegetal, Brasília. v. 12, p. 137-162, 2000. Qualis: Não identificado (REVISTA BRASILEIRA DE FISIOLOGIA VEGETAL, BRASÍLIA)
4.	BUCKERIDGE, M. S.; TINÉ, M. A. S. ; Lima, D U ; Santos HP. Mobilisation of storage cell wall polysaccharides in seeds. Plant Physiology and Biochemistry (Paris). v. 38, p. 141-156, 2000. Qualis: A1
5.	CARVALHO-ALVES, P. C. ; HERING, V. R. ; OLIVEIRA, J. M. S. ; SALINAS, R. K. ; Verjovski-Almeida, S.. Requirement of the hinge domain for dimerization of Ca2+-ATPase large cytoplasmic portion expressed in bacteria. Biochimica et Biophysica Acta. Bioenergetics. v. 1467, n. 1, p. 73-84, 2000.Qualis: C
6.	CHIGANCAS, V. ; MIYAJI, E. N. ; MUOTRI, A. R. ; JACYSYN, J. ; AMARANTES-MENDES, G. ; YASUI, A. ; MENCK CF. Photorepair prevents ultraviolet-induced apoptosis in human cells expressing the marsupial photolyase gene. Cancer Research, USA. v. 60, p. 2458-2463, 2000. Qualis: Não identificado (CANCER RESEARCH, USA)
7.	D NETO, e ; CORREA, R.G ; Verjovski-Almeida, S. ; BRIONES, M. ; NAGAI, M. A. ; JUNIOR, W.S ; ZAGO, M. A. ; BORDIN, S. ; COSTA, F. F. ; GOLDMAN, G. H. ; CARVALHO, A. F. ; MATSUKUMA, A. ; BAIA, G. S. ; SIMPSON, D. H. ; BURSTEIN, A. ; OLIVEIRA, P. S. L. ; BUCHER, P. ; JONGENEEL, C. V. ; O'HARE, M. J. ; SOARES, F.. Shotgun sequencing of the human transcriptome with open reading frame expressed sequence tags,. PNAS. Proceedings of the National Academy of Sciences of the United States of America. v. 97, p. 3491-3496, 2000.Qualis: A1
8.	DEGREVE, L. ; Da SILVA, F. L. B.. Detailed study of 1M aqueous NaCl solution by computer simulations. Journal of Molecular Liquids. v. 87, n. 2-3, p. 217-232, 2000. Qualis: A1
9.	DESOUZA, S. ; CAMARGO, A. ; BRIONES, M. ; COSTA, F. ; NAGAI, M ; Verjovski-Almeida, S. ; 69_other_authors ; BRENTANI, R. R. ; REIS, L. F. L. ; DIAS NETO, E. ; SIMPSON, A. J.. Identification of human chromosome 22 transcribed sequences with ORF expressed sequence tags. PNAS. Proceedings of the National Academy of Sciences of the United States of America. v. 97, p. 12690-12693, 2000.Qualis: A1
10.	FIETTO, J. ; DEMARCO, R. ; Verjovski-Almeida, S. ; D NETO, e ; SIMPSON, A.. Construction of ORESTES cDNA Libraries using Touch-down PCR. U S Letters Patent Application no 196716, Addendum to the Patent. 2000.Qualis: Não identificado (U S LETTERS PATENT APPLICATION NO 196716, ADDENDUM TO THE PATENT)
11.	Giuliatti, S.; Gallo Jr., L. ; Almeida-Filho, O.C. ; SCHMIDT, A. ; Marin-Neto, J.A. ; Pelá, C.A. ; Maciel, B.C.. A pulsatile flow model for in vitro quantitative evaluation of prosthetic valve regurgitation. Brazilian Journal of Medical and Biological Research. v. 33, p. 341-346, 2000. Qualis: A4
12.	HASHIMOTO, R. F.; BARRERA, J. ; FERREIRA, C. E.. A Combinatorial Optimization Technique for the Sequential Decomposition of Erosions and Dilations. Journal of Mathematical Imaging and Vision. v. 13, p. 17-33, 2000. Qualis: A1
13.	KOBORI, R. F. ; VECCHIA, P. T. D. ; KUROZAWA, C. ; SOLER, J. M. P.. Avaliação da resistência de linhagens de Capsicum annum quando inoculadas com três concentrações de inóculo de Phytophthora capsici. Summa Phytopathologica. v. 26, n. 1, p. 77-81, 2000.Qualis: B3
14.	MAYWORM, M. A. S. ; BUCKERIDGE, M. S. ; Salatino A. Monomer composition of polysaccharides of seed cell walls and the taxonomy of the Vochysiaceae. Phytochemistry. v. 55, p. 581-587, 2000. Qualis: A2
15.	MIYAJI, E. N. ; JOHNSON, R. ; EVENE, E. ; MEZZINA, M. ; SARASIN, A. ; MENCK CF. Characterization of a mutant rat kangaroo cell line with alteration in cell cycle and DNA repair. Genetics and Molecular Biology, Brasil. v. 23, p. 689-694, 2000.Qualis: Não identificado (GENETICS AND MOLECULAR BIOLOGY, BRASIL)
16.	SAMAIA, H. B.; VALLADA, H. P.. Aspectos genéticos da doença de Alzheimer. Revista de Psiquiatria Clínica. v. 27, p. 104-110, 2000. Qualis: Não identificado (REVISTA DE PSIQUIATRIA CLÍNICA)
17.	SAMAIA, H. B.; VALLADA, H. P.. Esquizofrenia: aspectos genéticos e estudos de fatores de risco.. Revista de Psiquiatria Clínica. v. 22, n. I, p. 2-4, 2000. Qualis: Não identificado (REVISTA DE PSIQUIATRIA CLÍNICA)
18.	Simpson, A. J. G. ; Reinach, F.C. ; Arruda, P. ; Abreu, F. A. ; Acencio, M. ; Alvarenga, R. ; Alves, L. M. C. ; Araya, J. E. ; Baia, G. S. ; Baptista, C. S. ; Barros, M. H. ; Bonaccorsi, E. D. ; Bordin, S. ; Bové, J. M. ; Briones, M. R. S. ; Bueno, M. R. P. ; CAMARGO, A. A. ; Camargo, L. E. A. ; Carraro, D. M. ; DA SILVA, A. M.. The genome sequence of the plant pathogen Xylella fastidiosa.. Nature (London), Londres. v. 406, p. 151-157, 2000. Qualis: Não identificado (NATURE , LONDRES)
19.	SOLER, J. M. P.; SINGER, J. M.. Optimal Covariance Adjustment in Growth Curve Models. Computational Statistics & Data Analysis. v. 33, n. 1, p. 101-110, 2000.Qualis: A2
20.	TINÉ, M. A. S. ; CORTELAZZO, A. L. ; BUCKERIDGE, M. S.. Xyloglucan mobilisation in cotyledons of developing plantlets of Hymenaea courbaril L. (Leguminosae-Caesalpinoideae). Plant Science (Limerick). v. 154, p. 117-126, 2000. Qualis: A1
21.	TINÉ, M. A. S. ; CORTELAZZO, A. L. ; BUCKERIDGE, M. S.. Occurrence of xyloglucan containing protuberances in the storage cell walls of cotyledons of Hymenaea courbaril L. Brazilian Journal of Botany. v. 23, p. 413-417, 2000. Qualis: B1

(*) Relatório criado com produções desde 2000 até 2024
Data de processamento: 05/12/2024 01:27:53