Programa de Pós Graduação em Bioinformática

2020

1.	AGUIAR, RENATO S. ; POHL, FABIO ; MORAIS, GUILHERME L. ; NOGUEIRA, FABIO C. S. ; CARVALHO, JOSEANE B. ; GUIDA, LETÍCIA ; ARGE, LUIS W. P. ; MELO, ADRIANA ; MOREIRA, MARIA E. L. ; CUNHA, DANIELA P. ; GOMES, LEONARDO ; PORTARI, ELYZABETH A. ; VELASQUEZ, ERIKA ; MELANI, RAFAEL D. ; PEZZUTO, PAULA ; DE CASTRO, FERNANDA L. ; GEDDES, VICTOR E. V. ; GERBER, ALEXANDRA L. ; AZEVEDO, GIRLENE S. ; NAKAYA, H. I. ; et.al. Molecular alterations in the extracellular matrix in the brains of newborns with congenital Zika syndrome. Science Signaling. v. 13, p. eaay6736, 2020. Qualis: A2
2.	AL ASSAL, KARINA ; PRIFTI, EDI ; BELDA, EUGENI ; SALA, PRISCILA ; CLÉMENT, KARINE ; DAO, MARIA-CARLOTA ; DORÉ, JOEL ; LEVENEZ, FLORENCE ; TADDEI, CARLA R. ; FONSECA, DANIELLE CRISTINA ; ROCHA, ILANNA MARQUES ; BALMANT, BIANCA DEPIERI ; THOMAS, ANDREW MALTEZ ; SANTO, MARCO A. ; DIAS-NETO, Emmanuel ; SETUBAL, JOÃO CARLOS ; ZUCKER, JEAN-DANIEL ; BELARMINO, GILIANE ; TORRINHAS, RAQUEL SUSANA ; WAITZBERG, DAN L. ; et.al. Gut Microbiota Profile of Obese Diabetic Women Submitted to Roux-en-Y Gastric Bypass and Its Association with Food Intake and Postoperative Diabetes Remission. Nutrients. v. 12, p. 278, 2020. Qualis: A1
3.	ALVES, L. B. ; CASTILLO, W. O. ; GIULIATTI, S. Analyzing Switch Regions of Human Rab10 by Molecular Dynamics Simulations. Em: XIII Brazilian Symposium on Bioinformatics (BSB 2020), 2020, Online Meeting. Abstracts, v. XIII, p. 1-1, 2020.
4.	Alves, Levy Bueno ; Castillo-Ordoñez, William O. ; Giuliatti, Silvana. Analyzing Switch Regions of Human Rab10 by Molecular Dynamics Simulations. Em: João Carlos Setubal; Waldeyr Mendes Silva. (Org.). Lecture Notes in Computer Science. 13ed. : Springer International Publishing. 2020.v. 12558, p. 215-220.
5.	ALVES, WONDER A.L. ; Gobber, Charles F. ; J. SILVA, DENNIS ; MORIMITSU, ALEXANDRE ; HASHIMOTO, RONALDO F. ; MARCOTEGUI, BEATRIZ. Image segmentation based on ultimate levelings: from attribute filters to machine learning strategies. PATTERN RECOGNITION LETTERS. v. 133, p. 264-271, 2020. Qualis: A2
6.	AMARAL, MURILO S. ; MACIEL, LUCAS F. ; SILVEIRA, GILBERT O. ; OLBERG, GIOVANNA G. O. ; LEITE, JOÃO V. P. ; IMAMURA, LUCAS K. ; PEREIRA, ADRIANA S. A. ; Miyasato, Patricia A. ; NAKANO, ELIANA ; Verjovski-Almeida, Sergio. Long non-coding RNA levels can be modulated by 5-azacytidine in Schistosoma mansoni. Scientific Reports. v. 10, p. 21565, 2020. Qualis: A2
7.	Amaral, Murilo Sena ; GOULART, ERNESTO ; CAIRES-JÚNIOR, LUIZ CARLOS ; MORALES-VICENTE, DAVID ABRAHAM ; SOARES-SCHANOSKI, ALESSANDRA ; GOMES, ROSELANE PAIVA ; OLBERG, GIOVANNA GONÇALVES DE OLIVEIRA ; ASTRAY, RENATO MANCINI ; KALIL, JORGE E. ; Zatz, Mayana ; Verjovski-Almeida, Sergio. Differential gene expression elicited by ZIKV infection in trophoblasts from congenital Zika syndrome discordant twins. PLoS Neglected Tropical Diseases. v. 14, p. e0008424, 2020. Qualis: A1
8.	AMBRIOLA OKU, AMANDA YUMI ; ZIMEO MORAIS, GUILHERME AUGUSTO ; ARANTES BUENO, ANA PAULA ; Fujita, André ; SATO, João Ricardo. Potential Confounders in the Analysis of Brazilian Adolescent?s Health: A Combination of Machine Learning and Graph Theory. International Journal of Environmental Research and Public Health. v. 17, p. 90, 2020. Qualis: A2
9.	ANDRADE, F. ; NAKATA, A. ; GOTOH, N. ; FUJITA, A.. Large miRNA survival analysis reveals a prognostic four-biomarker signature for triple negative breast cancer. GENETICS AND MOLECULAR BIOLOGY. v. 1, p. 1, 2020. Qualis: A4
10.	ARNS, THAIS ; ANTUNES, DINLER A. ; ABELLA, JAYVEE R. ; RIGO, MAURÍCIO M. ; KAVRAKI, LYDIA E. ; Giuliatti, Silvana ; DONADI, EDUARDO A.. Structural Modeling and Molecular Dynamics of the Immune Checkpoint Molecule HLA-G. Frontiers in Immunology. v. 11, p. 1-13, 2020. Qualis: A1
11.	AZEVEDO, HÁTYLAS ; PESSOA, GUILHERME CAVALCANTE ; DE LUNA VITORINO, FRANCISCA NATHÁLIA ; NSENGIMANA, JÉRÉMIE ; NEWTON-BISHOP, JULIA ; REIS, EDUARDO MORAES ; DA CUNHA, JÚLIA PINHEIRO CHAGAS ; JASIULIONIS, MIRIAM GALVONAS. Gene co-expression and histone modification signatures are associated with melanoma progression, epithelial-to-mesenchymal transition, and metastasis. Clinical Epigenetics. v. 12, p. 1, 2020. Qualis: A1
12.	BARBOSA, MAYSA S. ; ALVES, R. ; REZENDE, IZADORA S. ; PEREIRA, S. ; CAMPOS, GUILHERME B. ; FREITAS, L. ; CHOPRA-DEWASTHALY, R. ; FERREIRA, L. C. ; GUIMARÃES, A. M. S. ; MARQUES, L. M. ; TIMENETSKY, J.. Novel antigenic proteins of Mycoplasma agalactiae as potential vaccine and serodiagnostic candidates. VETERINARY MICROBIOLOGY. v. 251, p. 10886, 2020.Qualis: A1
13.	Barroso da Silva, Fernando L. Palestra convidada em mesa temática: Abordagens inovativas em Bioinformática Estrutural: do entendimento de mecanismos a aplicações. 2020. Apresentação de Trabalho/Congresso
14.	Barroso da Silva, Fernando L. Palestra: Peculiar electrostatic mechanisms observed in biomolecular systems and constant-pH simulations. 2020. Apresentação de Trabalho/Outra
15.	Barroso da Silva, Fernando L. Peculiar electrostatic mechanisms observed in biomolecular systems and constant-pH simulations. São Paulo, SP: SAIFR. 2020. Texto de divulgação científica
16.	barroso da silva, fernando luis; CORRÊA GIRON, CAROLINA. Palestra convidada: Aspectos moleculares da COVID19. 2020. Apresentação de Trabalho/Simpósio
17.	Barroso da Silva, Fernando Luís. Palestra: From Computational Physics to Structural Bioinformatics. 2020. Apresentação de Trabalho/Outra
18.	Barroso da Silva, Fernando Luís. Palestra convidada: Developing and applying fast constant-pH simulation methods to understand anddevelop new binders to SARS-CoV-2. 2020. Apresentação de Trabalho/Simpósio
19.	BONEZI, VIVIAN ; CATANEO, ALLAN H. D. ; BRANQUINHO, MARYANA S. F. ; SILVA, MAYSA B. B. ; GONZALEZ-DIAS, PATRICIA ; PEREIRA, SAMUEL S. ; FERREIRA, LUÍS C. DE SOUZA ; Nakaya, Helder I. ; CAMPA, ANA ; WOWK, PRYSCILLA F. ; SILVEIRA, EDUARDO L. V.. Flavivirus-Mediating B Cell Differentiation Into Antibody-Secreting Cells in Humans Is Associated With the Activation of the Tryptophan Metabolism. Frontiers in Immunology. v. 11, p. 1, 2020. Qualis: A1
20.	BORDINI, D. ; PAULA, C. S. ; CUNHA, G. R. ; CAETANO, S. C. ; BAGAIOLO, L. F. ; RIBEIRO, T. C. ; MARTONE, M. C. C. ; PORTOLESE, J. ; MOYA, A. C. ; BRUNONI, D. ; BOSA, C. ; BRENTANI, H. ; COGO'MOREIRA, H. ; JESUS MARI, J.. A randomised clinical pilot trial to test the effectiveness of parent training with video modelling to improve functioning and symptoms in children with autism spectrum disorders and intellectual disability. JOURNAL OF INTELLECTUAL DISABILITY RESEARCH. v. 64, p. 629-643, 2020. Qualis: A1
21.	BORGES, JÉSSICA BASSANI ; OLIVEIRA, VICTOR FERNANDES DE ; FERREIRA, GLAUCIO MONTEIRO ; LOS, BRUNA ; BARBOSA, THAIS KRISTINI ALMENDROS AFONSO ; MARÇAL, ELISANGELA DA SILVA RODRIGUES ; DAGLI-HERNANDEZ, CAROLINA ; DE FREITAS, RENATA CAROLINE COSTA ; BORTOLIN, RAUL HERNANDES ; MORI, AUGUSTO AKIRA ; HIRATA, THIAGO DOMINGUEZ CRESPO ; NAKAYA, HELDER TAKASHI IMOTO ; BASTOS, GISELE MEDEIROS ; THUROW, HELENA STRELOW ; GONÇALVES, RODRIGO MARQUES ; ARAUJO, DANIEL BRANCO DE ; ZATZ, HENRY PAULO ; BERTOLAMI, ADRIANA ; FALUDI, ANDRÉ ARPAD ; BERTOLAMI, MARCELO CHIARA ; et.al. Genomics, epigenomics and pharmacogenomics of Familial Hypercholesterolemia (FHBGEP): A study protocol. Research in Social & Administrative Pharmacy. v. 1, p. 1, 2020. Qualis: A3
22.	BRAGA, LUCAS P. P. ; SPOR, AYMÉ ; KOT, WITOLD ; BREUIL, MARIE-CHRISTINE ; HANSEN, LARS H. ; Setubal, João C. ; PHILIPPOT, LAURENT. Impact of phages on soil bacterial communities and nitrogen availability under different assembly scenarios. Microbiome. v. 8, p. 52, 2020. Qualis: A1
23.	BRANDÃO, W.N. ; DE OLIVEIRA, M.G. ; ANDREONI, R.T. ; Nakaya, H. ; FARIAS, A.S. ; PERON, J.P.S.. Neuroinflammation at single cell level: What is new?. JOURNAL OF LEUKOCYTE BIOLOGY. v. 108, p. 1129-1137, 2020. Qualis: A2
24.	BRENTANI, ALEXANDRA ; SCOLEZE FERRER, ANA PAULA ; BRENTANI, HELENA ; LIU, CINDY H ; GRISI, SANDRA J F E ; VALENTE, MARIA HELENA ; GOMES, FILUMENA ; DE ULHÔA ESCOBAR, ANA MARIA ; FINK, GÜNTHER. Cohort profile: São Paulo Western Region Birth Cohort (ROC). INTERNATIONAL JOURNAL OF EPIDEMIOLOGY. v. 49, p. 1438-1438g, 2020. Qualis: A1
25.	BUCKERIDGE, M.S. Urbsistemas: uma abordagem sistêmica para as cidades sustentáveis, eficientes e resilientes. 2020. Apresentação de Trabalho/Seminário
26.	BUCKERIDGE, MARCOS SILVEIRA. Global analysis of the infection by COVID-19. AMBIENTE & SOCIEDADE (ONLINE). v. 23, p. 1-8, 2020. Qualis: A1
27.	BUCKERIDGE, MARCOS SILVEIRA; PHILIPPI JUNIOR, ARLINDO. Ciência e políticas públicas nas cidades: revelações da pandemia da Covid-19. ESTUDOS AVANÇADOS (ONLINE). v. 34, p. 141-156, 2020. Qualis: A1
28.	BUFACCHI, PAULO ; BIZZO, WALDIR A. ; Buckeridge, Marcos S. ; FRANCO-JACOME, DIEGO L. ; GRANDIS, ADRIANA ; CAMBLER, ARTHUR B. ; KRIEGER FILHO, GUENTHER C.. Thermal degradation of leaves from the Amazon rainforest litter considering non-structural, structural carbohydrates and lignin composition. Bioresource Technology Reports. v. 11, p. 100490, 2020. Qualis: C
29.	CANDIDO, DARLAN S. ; CLARO, INGRA M. ; DE JESUS, JAQUELINE G. ; SOUZA, WILLIAM M. ; MOREIRA, FILIPE R. R. ; DELLICOUR, SIMON ; MELLAN, THOMAS A. ; DU PLESSIS, LOUIS ; PEREIRA, RAFAEL H. M. ; SALES, FLAVIA C. S. ; MANULI, ERIKA R. ; THÉZÉ, JULIEN ; ALMEIDA, LUIZ ; MENEZES, MARIANE T. ; VOLOCH, CAROLINA M. ; FUMAGALLI, MARCILIO J. ; COLETTI, THAÍS M. ; DA SILVA, CAMILA A. M. ; RAMUNDO, MARIANA S. ; NAKAYA, H. I. ; et.al. Evolution and epidemic spread of SARS-CoV-2 in Brazil. SCIENCE. v. 1, p. eabd2161, 2020. Qualis: A1
30.	Capuani, Ligia ; BIERRENBACH, ANA LUIZA ; ALENCAR, AIRLANE PEREIRA ; MENDRONE, ALFREDO ; Ferreira, João Eduardo ; Custer, Brian ; RIBEIRO, ANTONIO LUIZ P. ; SABINO, ESTER CERDEIRA. Correction: Mortality among blood donors seropositive and seronegative for Chagas disease (1996-2000) in São Paulo, Brazil: A death certificate linkage study. PLoS Neglected Tropical Diseases. v. 14, p. e0008871, 2020. Qualis: A1
31.	CARLOTTI, D. ; NUNES, F. L. S. ; FERREIRA, J.E.. Relational data model and programs to use and view data from the FAPESP COVID-19 Data Sharing/BR repository. Repositório de Dados Científicos da USP. 2020. Repositório de Dados Cientíticos
32.	CASTILLO, WILLIAN ORLANDO ; PALOMINO, NILZA VELASCO ; TAKAHASHI, CATARINA SATIE ; Giuliatti, Silvana. Genistein and Galantamine Combinations Decrease β-Amyloid Peptide (1-42)-Induced Genotoxicity and Cell Death in SH-SY5Y Cell Line: an In Vitro and In Silico Approach for Mimic of Alzheimer?s Disease. NEUROTOXICITY RESEARCH. v. 38, p. 691-706, 2020. Qualis: A3
33.	CASTRO E SILVA, MARCOS ARAÚJO ; NUNES, KELLY ; LEMES, RENAN BARBOSA ; MAS-SANDOVAL, ÀLEX ; GUERRA AMORIM, CARLOS EDUARDO ; KRIEGER, JOSE EDUARDO ; MILL, JOSÉ GERALDO ; SALZANO, FRANCISCO MAURO ; Bortolini, Maria Cátira ; PEREIRA, ALEXANDRE DA COSTA ; COMAS, DAVID ; Hünemeier, Tábita. Genomic insight into the origins and dispersal of the Brazilian coastal natives. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. v. 00, p. 201909075, 2020. Qualis: A1
34.	Castro Guzman, Grover Enrique ; BALARDIN, JOANA BISOL ; Biazoli, Claudinei Eduardo ; SATO, João Ricardo ; Fujita, Andre. Network analysis of neuropsychiatry disorders. Precision Medicine for Investigators, Practitioners and Providers. 1ed. Em: . : Elsevier. 2020.p. 397-408.
35.	CASTRO, L.P. ; SAHBATOU, M. ; KEHDY, F.S.G. ; FARIAS, A.A. ; YURCHENKO, A.A. ; DE SOUZA, T.A. ; ROSA, R.C.A. ; MENDES-JUNIOR, C.T. ; BORDA, V. ; MUNFORD, V. ; ZANARDO, É.A. ; CHEHIMI, S.N. ; KULIKOWSKI, L.D. ; AQUINO, M.M. ; LEAL, T.P. ; TARAZONA-SANTOS, E. ; CHAIBUB, S.C. ; GENER, B. ; CALMELS, N. ; MENCK CF ; et.al. The Iberian legacy into a young genetic xeroderma pigmentosum cluster in central Brazil. MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS. v. 852, p. 503164, 2020. Qualis: A4 (MUTATION RESEARCH. GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS)
36.	CODO, ANA CAMPOS ; DAVANZO, GUSTAVO GASTÃO ; MONTEIRO, LAUAR DE BRITO ; DE SOUZA, GABRIELA FABIANO ; MURARO, STÉFANIE PRIMON ; VIRGILIO-DA-SILVA, JOÃO VICTOR ; PRODONOFF, JULIANA SILVEIRA ; CARREGARI, VICTOR CORASOLLA ; DE BIAGI JUNIOR, CARLOS ALBERTO OLIVEIRA ; CRUNFLI, FERNANDA ; JIMENEZ RESTREPO, JEFFERSSON LEANDRO ; VENDRAMINI, PEDRO HENRIQUE ; REIS-DE-OLIVEIRA, GUILHERME ; BISPO DOS SANTOS, KARINA ; TOLEDO-TEIXEIRA, DANIEL A. ; PARISE, PIERINA LORENCINI ; MARTINI, MATHEUS CAVALHEIRO ; MARQUES, RAFAEL ELIAS ; CARMO, HELISON R. ; NAKAYA, H. I. ; et.al. Elevated Glucose Levels Favor SARS-CoV-2 Infection and Monocyte Response through a HIF-1α/Glycolysis-Dependent Axis. Cell Metabolism. v. 1, p. 1, 2020. Qualis: A1
37.	COELHO, VERÔNICA ; CABRAL, AMANDA ; MARTINS, FELIPE ; ARCURI, HELEN ; CARMONA, PRISCILA ; MORAES-VIEIRA, PEDRO MANOEL MENDES ; LEMOS, FRANCINE ; FONSECA, SIMONE G. ; DE FARIA, ANA CAETANO ; MONTEIRO, SANDRA MARIA ; NORONHA, IRENE ; SAITOVITCH, DAVID ; NAKAYA, HELDER ; FERREIRA, LUDMILA RODRIGUES PINTO ; KALIL, JORGE. Toward an Integrated View of Operational Tolerance in Human Renal Transplantation: A Systems Biology Perspective. CRITICAL REVIEWS IN IMMUNOLOGY. v. 40, p. 379-403, 2020. Qualis: B2
38.	CORRÊA GIRON, CAROLINA ; LAAKSONEN, AATTO ; Barroso da Silva, Fernando L.. On the interactions of the receptor-binding domain of SARS-CoV-1 and SARS-CoV-2 spike proteins with monoclonal antibodies and the receptor ACE2. VIRUS RESEARCH. v. 285, p. 198021, 2020. Qualis: A3
39.	COUTINHO CARNEIRO, VITOR ; DE ABREU DA SILVA, ISABEL CAETANO ; Amaral, Murilo Sena ; PEREIRA, ADRIANA S. A. ; SILVEIRA, GILBERT OLIVEIRA ; PIRES, DAVID DA SILVA ; Verjovski-Almeida, Sergio ; DEKKER, FRANK J. ; ROTILI, DANTE ; MAI, ANTONELLO ; LOPES-TORRES, EDUARDO JOSÉ ; ROBAA, DINA ; SIPPL, WOLFGANG ; Pierce, Raymond J. ; BORRELLO, M. TERESA ; GANESAN, A. ; LANCELOT, JULIEN ; THIENGO, SILVANA ; FERNANDEZ, MONICA AMMON ; VICENTINO, AMANDA ROBERTA REVOREDO ; et.al. Pharmacological inhibition of lysine-specific demethylase 1 (LSD1) induces global transcriptional deregulation and ultrastructural alterations that impair viability in Schistosoma mansoni. PLoS Neglected Tropical Diseases. v. 14, p. e0008332, 2020. Qualis: A1
40.	Creighton, Rachel ; SCHUCH, VIVIANE ; URBANSKI, ALYSSON H. ; GIDDALURU, JEEVAN ; COSTA-MARTINS, ANDRE G. ; Nakaya, Helder I.. Network vaccinology. SEMINARS IN IMMUNOLOGY. v. 1, p. 101420, 2020. Qualis: A1
41.	CUTIÑO-JIMÉNEZ, ANIA MARGARITA ; Menck, Carlos Frederico Martins ; CAMBAS, YUSDIEL TORRES ; DÍAZ-PÉREZ, JUAN CARLOS. Protein signatures to identify the different genera within the Xanthomonadaceae family. BRAZILIAN JOURNAL OF MICROBIOLOGY. v. 51, p. 1515-1526, 2020. Qualis: B1
42.	da Silva, Fernando Luís Barroso; CARLONI, PAOLO ; CHEUNG, DAVID ; COTTONE, GRAZIA ; DONNINI, SERENA ; ALLEN FOEGEDING, E. ; GULZAR, MUHAMMAD ; 'JACQUIER, 'JEAN CHRISTOPHE ; LOBASKIN, VLADIMIR ; MACKERNAN, DONAL ; NAVEH, ZEYNAB MOHAMMAD HOSSEINI ; RADHAKRISHNAN, RAVI ; SANTISO, ERIK E.. Understanding and Controlling Food Protein Structure and Function in Foods: Perspectives from Experiments and Computer Simulations. Annual Review of Food Science and Technology. v. 11, p. 365-387, 2020. Qualis: Não identificado (ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY)
43.	DANTAS, LUÍZA LANE DE BARROS ; ALMEIDA-JESUS, FELIPE MARCELO ; DE LIMA, NATALIA OLIVEIRA ; ALVES-LIMA, CÍCERO ; NISHIYAMA-JR, MILTON YUTAKA ; Carneiro, Monalisa Sampaio ; SOUZA, GLAUCIA MENDES ; Hotta, Carlos Takeshi. Rhythms of Transcription in Field-Grown Sugarcane Are Highly Organ Specific. Scientific Reports. v. 10, p. 6565, 2020. Qualis: A2
44.	DE ASSIS, LEONARDO VINÍCIUS MONTEIRO ; MENDES, DAVI ; SILVA, MATHEUS MOLINA ; KINKER, GABRIELA SARTI ; PEREIRA-LIMA, ISABELLA ; MORAES, MARIA NATHÁLIA ; Menck, Carlos Frederico Martins ; CASTRUCCI, ANA MARIA DE LAURO. Melanopsin mediates UVA-dependent modulation of proliferation, pigmentation, apoptosis, and molecular clock in normal and malignant melanocytes. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. v. 1867, p. 118789, 2020. Qualis: A2 (BIOCHIMICA ET BIOPHYSICA ACTA. MOLECULAR CELL RESEARCH)
45.	de Morais, H. A. ; Santos, A.P. ; NASCIMENTO, N. C. ; KMETIUK, L. B. ; BRANDAO, P. E. ; GUIMARÃES, A. M. S. ; PETTAN-BREWER, C. ; BIONDO, A. W.. Natural infection by SARS-CoV-2 in companion animals: a review of case reports and current evidence of their role in the epidemiology of COVID-19. FRONTIERS IN VETERINARY SCIENCE. v. 591216, p. 823, 2020. Qualis: A1
46.	DE OLIVEIRA ALVES, NILMARA ; MARTINS PEREIRA, GUILHERME ; DI DOMENICO, MARLISE ; COSTANZO, GIOVANNA ; BENEVENUTO, SARAH ; DE OLIVEIRA FONOFF, ADRIANA M. ; DE SOUZA XAVIER COSTA, NATÁLIA ; RIBEIRO JÚNIOR, GABRIEL ; SATORU KAJITANI, GUSTAVO ; CESTARI MORENO, NATÁLIA ; FOTORAN, WESLEY ; IANNICELLI TORRES, JANAÍNA ; DE ANDRADE, JAILSON BITTENCOURT ; MATERA VERAS, MARIANA ; ARTAXO, PAULO ; Menck, Carlos Frederico Martins ; DE CASTRO VASCONCELLOS, PÉROLA ; SALDIVA, PAULO. Inflammation response, oxidative stress and DNA damage caused by urban air pollution exposure increase in the lack of DNA repair XPC protein. ENVIRONMENT INTERNATIONAL. v. 145, p. 106150, 2020. Qualis: A1
47.	DE OLIVEIRA, THAÍS CRIPPA ; CORDER, RODRIGO M. ; EARLY, ANGELA ; RODRIGUES, PRISCILA T. ; LADEIA-ANDRADE, SIMONE ; Alves, João Marcelo P. ; NEAFSEY, DANIEL E. ; FERREIRA, MARCELO U.. Population genomics reveals the expansion of highly inbred Plasmodium vivax lineages in the main malaria hotspot of Brazil. PLoS Neglected Tropical Diseases. v. 14, p. e0008808, 2020. Qualis: A1
48.	de SOUZA, J. B. ; ALMEIDA-SOUZA, H. O. ; ZAINI, P. A. ; ALVES, M. N. ; SOUZA, A. G. ; PIERRY, P. M. ; da Silva, Aline M. ; GOULART, L. R. ; DANDEKAR, A. M. ; NASCIMENTO, R.. Xylella fastidiosa subsp. pauca strains Fb7 and 9a5c from citrus display differential behavior, secretome, and plant virulence. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. v. 21, p. 6769, 2020. Qualis: Não identificado (PAUCA STRAINS FB7 AND 9A5C FROM CITRUS DISPLAY DIFFERENTIAL BEHAVIOR, SECRETOME, AND PLANT VIRULENCE. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES)
49.	DE SOUZA, ROBSON FRANCISCO. Métodos computacionais em biologia molecular. Em: Marilis do Valle Marques;Regina Lúcia Baldini;Rodrigo da Silva Galhardo;Tiago Campos Pereira. (Org.). Métodos de Bioquímica e Biologia Molecular - Fundamentos e Aplicações. 1ed.Ribeirão Preto. : Sociedade Brasileira de Genética. 2020.p. 1.
50.	DIAS DA PURIFICAÇÃO, ALINE ; MARINS DE AZEVEDO, NATHALIA ; GUARANY DE ARAUJO, GABRIEL ; FRANCISCO DE SOUZA, ROBSON ; RODRIGUES GUZZO, CRISTIANE. The World of Cyclic Dinucleotides in Bacterial Behavior. MOLECULES. v. 25, p. 2462, 2020. Qualis: A2
51.	DINIZ, AUGUSTO LIMA ; DA SILVA, DANIELLE IZILDA RODRIGUES ; LEMBKE, CAROLINA GIMILIANI ; COSTA, MAXIMILLER DAL-BIANCO LAMAS ; TEN-CATEN, FELIPE ; LI, FORREST ; VILELA, ROMEL DUARTE ; Menossi, Marcelo ; WARE, DOREEN ; ENDRES, LAURICIO ; SOUZA, GLAUCIA MENDES. Amino Acid and Carbohydrate Metabolism Are Coordinated to Maintain Energetic Balance during Drought in Sugarcane. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. v. 21, p. 9124, 2020. Qualis: A2
52.	do Valle, Italo F. ; Nakaya, Helder I.. Network Medicine: Methods and Applications. Computational Biology. 1ed. Em: . : Springer International Publishing. 2020.p. 3-18.
53.	DOS-SANTOS, JOÃO CONRADO KHOURI ; SILVA-FILHO, JOÃO LUIZ ; JUDICE, CARLA C. ; KAYANO, ANA CAROLINA ANDRADE VITOR ; ALIBERTI, JÚLIO ; KHOURI, RICARDO ; DE LIMA, DIÓGENES S. ; NAKAYA, HELDER ; LACERDA, MARCUS VINICIUS GUIMARÃES ; DE PAULA, ERICH VINICIUS ; LOPES, STEFANIE COSTA PINTO ; COSTA, FABIO TRINDADE MARANHÃO. Platelet disturbances correlate with endothelial cell activation in uncomplicated Plasmodium vivax malaria. PLoS Neglected Tropical Diseases. v. 14, p. e0007656, 2020. Qualis: A1
54.	DURHAM, A. M. Alinhamento de Sequências. 2020. Apresentação de Trabalho/Conferência ou palestra
55.	FARHAT, LUIS C. ; BRENTANI, HELENA ; POLANCZYK, GUILHERME V.. Polygenic risk as a biomarker for ADHD. JOURNAL OF THE AMERICAN ACADEMY OF CHILD AND ADOLESCENT PSYCHIATRY. v. 59, p. 926-928, 2020. Qualis: A1
56.	FATORI, DANIEL ; ARGEU, ADRIANA ; BRENTANI, HELENA ; CHIESA, ANNA ; FRACOLLI, LISLAINE ; MATIJASEVICH, ALICIA ; MIGUEL, EURIPEDES C ; POLANCZYK, GUILHERME. Maternal Parenting Electronic Diary in the Context of a Home Visit Intervention for Adolescent Mothers in an Urban Deprived Area of São Paulo, Brazil: Randomized Controlled Trial. JMIR mHealth and uHealth. v. 8, p. e13686, 2020. Qualis: A3 (JMIR MHEALTH UHEALTH)
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63.	GOMES-FILHO, S. M. ; SANTOS, E. O. ; BERTOLDI, E. R. ; HEIDRICH, V. ; DAZZANI, B. ; REIS, EM ; BASSERES, D.S.. Aurora A kinase and its activator TPX2 are potential therapeutic targets in KRAS-induced pancreatic cancer. CELLULAR ONCOLOGY. v. 1, p. 1, 2020. Qualis: A1
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80.	LIU, CINDY H. ; FINK, GÜNTHER ; BRENTANI, HELENA ; BRENTANI, ALEXANDRA. Caregiver depression is associated with hair cortisol in a low-income sample of preschool-aged children. PSYCHONEUROENDOCRINOLOGY. v. 117, p. 104675, 2020. Qualis: A1
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83.	LOCOSSELLI, GIULIANO MASELLI ; BRIENEN, ROEL J. W. ; LEITE, MELINA DE SOUZA ; GLOOR, MANUEL ; KROTTENTHALER, STEFAN ; OLIVEIRA, ALEXANDRE A. DE ; BARICHIVICH, JONATHAN ; ANHUF, DIETER ; CECCANTINI, GREGORIO ; SCHÖNGART, JOCHEN ; BUCKERIDGE, MARCOS. Global tree-ring analysis reveals rapid decrease in tropical tree longevity with temperature. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. v. 117, p. 33358-33364, 2020. Qualis: A1
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87.	LÜTTGE, ULRICH ; BUCKERIDGE, MARCOS. Trees: structure and function and the challenges of urbanization. TREES-STRUCTURE AND FUNCTION. v. 1, p. 000-000, 2020. Qualis: Não identificado (TREES-STRUCTURE AND FUNCTION)
88.	MACIEIRA, BERNARDO PRETTI BECACICI ; LOCOSSELLI, GIULIANO MASELLI ; BUCKERIDGE, MARCOS SILVEIRA ; HARTMANN, HENRIK ; CUZZUOL, GERALDO ROGÉRIO FAUSTINI. Stem and leaf functional traits allow successional classification in six pioneer and non-pioneer tree species in Tropical Moist Broadleaved Forests. ECOLOGICAL INDICATORS. v. 113, p. 106254, 2020. Qualis: A1
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97.	MORIMITSU, ALEXANDRE ; PASSAT, NICOLAS ; ALVES, WONDER A.L. ; HASHIMOTO, RONALDO F.. Efficient component-hypertree construction based on hierarchy of partitions. PATTERN RECOGNITION LETTERS. v. 135, p. 30-37, 2020. Qualis: A2
98.	Nakaya, H. (II GBMeeting: Encontro da Pós-Graduação em Genética e Biologia Molecular@UNICAMP). 2020. Apresentação de Trabalho/Simpósio
99.	Nakaya, H. (CIDACS - Centro de Integração de Dados e Conhecimentos para Saúde@Salvador). 2020. Apresentação de Trabalho/Seminário
100.	Nakaya, H. (CRID retreat @ Minas Gerais) Palestrante convidado. 2020. Apresentação de Trabalho/Seminário
101.	Nakaya, H. (CEPID Obesidade@UNICAMP). 2020. Apresentação de Trabalho/Seminário
102.	Nakaya, Helder I. Projeto de Integração Tropical (PIT-TROP) @ FMT USP. 2020. Apresentação de Trabalho/Seminário
103.	Nakaya, Helder I. X Semana de Biotecnologia Industrial da Escola de Engenharia de Lorena/USP. 2020. Apresentação de Trabalho/Seminário
104.	Nakaya, Helder I. Programa de Pós-Graduação em Biologia de Sistemas do ICB USP. 2020. Apresentação de Trabalho/Seminário
105.	Nakaya, Helder I. SBBq 2020: Palestrante convidado. 2020. Apresentação de Trabalho/Congresso
106.	Nakaya, Helder I. Tópicos Avançados no Programa de pós-graduação de Biologia de Sistemas no ICB USP. 2020. Apresentação de Trabalho/Seminário
107.	Nakaya, Helder I. SBG (Genética) 2020: Palestrante. 2020. Apresentação de Trabalho/Congresso
108.	Nakaya, Helder I. ABCF - Palestrante. 2020. Apresentação de Trabalho/Congresso
109.	Nakaya, Helder I. World Vaccine Congress Seminar - Palestrante. 2020. Apresentação de Trabalho/Congresso
110.	Nakaya, Helder I. World Vaccine Congress - Mesa Redonda. 2020. Apresentação de Trabalho/Congresso
111.	Nakaya, Helder I. FeSBE Webinar Series - Palestrante. 2020. Apresentação de Trabalho/Congresso
112.	Nakaya, Helder I. XII Um Dia da Biometria @ Botucatu. 2020. Apresentação de Trabalho/Simpósio
113.	Nakaya, Helder I. Simpósio interno do Systems and Synthetic Biology (S2B). 2020. Apresentação de Trabalho/Simpósio
114.	Nakaya, Helder I. II IntegraBiotec @ São José dos Campos. 2020. Apresentação de Trabalho/Simpósio
115.	Nakaya, Helder I. BRAGFOST 2020 @ CAPES-Alemanha. 2020. Apresentação de Trabalho/Simpósio
116.	Nakaya, Helder I. Sessão Científica do Instituto Gonçalo Moniz ? Fiocruz Bahia. 2020. Apresentação de Trabalho/Seminário
117.	Nakaya, Helder I. Disciplina MPE-5758 ? ?Tópicos Avançados em Saúde da Criança e do Adolescente?. 2020. Apresentação de Trabalho/Seminário
118.	Nakaya, Helder I. Human Cell Atlas Latin America. 2020. Apresentação de Trabalho/Simpósio
119.	NAKAYA, HELDER I. (Instituto Butantan) Aula para a Disciplina: Aplicação de Imunobiológicos e Derivados de Microrganismos à Biotecnologia. 2020. Apresentação de Trabalho/Seminário
120.	NAKAYA, HELDER I. (ICB @ USP) Aula para BMI 5897 Innate and Adaptive Immunity in the CNS. 2020. Apresentação de Trabalho/Seminário
121.	NAKAYA, HELDER I. (SICO-Imunologia @ Brasília) III Simpósio de Imunologia da Região Centro-Oeste. Palestrante convidado. 2020. Apresentação de Trabalho/Simpósio
122.	NAKAYA, HELDER I. (GenoBio20 @ SBG) Palestrante convidado nos '20 anos de genômica e bioinformática no Brasil'. 2020. Apresentação de Trabalho/Congresso
123.	Nakaya, Helder I.. X-meeting 2020. 2020. Apresentação de Trabalho/Congresso
124.	Nakaya, Helder I.; THAKAR, JUILEE ; MARACAJA-COUTINHO, VINICIUS. Editorial: User-Friendly Tools Applied to Genetics or Systems Biology. Frontiers in Genetics. v. 11, p. 1, 2020. Qualis: A2
125.	Nakaya, Helder Imoto. XI Semana Acadêmica ICB/UFAM @ Manaus. ICB 50 anos: conectando vidas e histórias. 2020. Apresentação de Trabalho/Seminário
126.	Nakaya, Helder Imoto. 12o SIEPE (Salão Internacional de Ensino, Pesquisa e Extensão) @ Universidade Federal do Pampa (Unipampa). Palestrante convidado. 2020. Apresentação de Trabalho/Simpósio
127.	Nakaya, Helder Imoto. Palestra para o Centro de estudos @ ILMD/Fiocruz Amazônia. Palestrante convidado. 2020. Apresentação de Trabalho/Seminário
128.	Nakaya, Helder Imoto. VII Mostra Biofísica @ Universidade Federal de Uberlândia. Palestrante convidado. 2020. Apresentação de Trabalho/Seminário
129.	NAKAYA, HELDER TAKASHI IMOTO. Programa de Seminários do Departamento de Fisiologia do Instituto de Biociências - USP. 2020. Apresentação de Trabalho/Seminário
130.	NAKAYA, HELDER TAKASHI IMOTO. Webinar FAPESP on COVID-19. Contact tracing of COVID-19 and using it to direct government response in order to ease lockdowns. 2020. Apresentação de Trabalho/Seminário
131.	NAKAYA, HELDER TAKASHI IMOTO. Seminário INFAR. Departamento de Bioquímica. UNIFESP. 2020. Apresentação de Trabalho/Seminário
132.	NAKAYA, HELDER TAKASHI IMOTO. Webinar NuBBE (Nucleo de Bioensaios Biossíntese e Ecofisiologia de Produtos Naturais). 'Como a biologia de sistemas e a química de produtos naturais têm avançado na descoberta de importantes vias metabólicas e metabólitos'. 2020. Apresentação de Trabalho/Seminário
133.	NAKAYA, HELDER TAKASHI IMOTO. Seminário para o Programa de Pós em Genética UFPR. 2020. Apresentação de Trabalho/Seminário
134.	NAKAYA, HELDER TAKASHI IMOTO. Seminário Webinars COVID-19 UFRJ. 2020. Apresentação de Trabalho/Seminário
135.	NAKAYA, HELDER TAKASHI IMOTO. (Central University of Rajasthan@India) Integrated Strategies to Combat the Pandemic COVID-19. 2020. Apresentação de Trabalho/Simpósio
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191.	WANG, JAQUELINE YU TING ; WHITTLE, MARTIN R. ; PUGA, RENATO DAVID ; YAMBARTSEV, ANATOLY ; FUJITA, ANDRÉ ; Nakaya, Helder I.. Noninvasive prenatal paternity determination using microhaplotypes: a pilot study. BMC Medical Genomics. v. 13, p. 1, 2020. Qualis: A3
192.	WILEY, K. ; GOUVEIA, GISELE ; EUCLYDES, V. L. V. ; CAMILO, CAROLINE ; POLANCZYK, G. ; MIGUEL, E. C. ; BRENTANI. H. Lifetime exposure to traumatic stress and salivary cortisol levels in a cohort of first‐time adolescent mothers. Em: 45th Annual Meeting of the Human Biology Association, 2020. American Journal of Human Biology, v. 32, p. 62-62, 2020.
193.	WYLENSEK, DAVID ; HITCH, THOMAS C. A. ; RIEDEL, THOMAS ; AFRIZAL, AFRIZAL ; KUMAR, NEERAJ ; WORTMANN, ESTHER ; LIU, TIANZHE ; DEVENDRAN, SARAVANAN ; LESKER, TILL R. ; HERNÁNDEZ, SARA B. ; HEINE, VIKTORIA ; BUHL, EVA M. ; M. D?AGOSTINO, PAUL ; CUMBO, FABIO ; FISCHÖDER, THOMAS ; WYSCHKON, MARZENA ; LOOFT, TOREY ; PARREIRA, VALERIA R. ; ABT, BIRTE ; ALVES, J. M. P. ; et.al. A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity. Nature Communications. v. 11, p. 6389, 2020. Qualis: A1
194.	ZAINI, Paulo ; DA SILVA, A. M.. Microarranjos de DNA. Em: Marilis do Valle Marques; Regina Lúcia Baldini; Rodrigo da Silva Galhardo; Tiago Campos Pereira. (Org.). Métodos de Bioquímica e Biologia Molecular - Fundamentos e Aplicações. 1ed.Ribeirão Preto. : Sociedade Brasileira de Genética. 2020.v. 1, p. 1-10.
195.	ZANOLLA, THAIS ARBOCESE ; PERRONE, EDUARDO ; FOCK, RODRIGO AMBROSIO ; BORDINI, DANIELA ; Brentani, Helena Paula ; PEREZ, ANA BEATRIZ ALVAREZ ; BRUNONI, DECIO. TRANSLATION, CULTURAL ADAPTATION, AND EVIDENCE OF INSTRUMENT VALIDITY FOR A MORPHOLOGICAL EXAMINATION PERFORMED IN CHILDREN WITH AUTISM SPECTRUM DISORDER. REVISTA PAULISTA DE PEDIATRIA (IMPRESSO). v. 38, p. e2018318, 2020. Qualis: C
196.	ZIMMERMANN, PETRA ; PERRETT, KIRSTEN P. ; RITZ, NICOLE ; FLANAGAN, KATIE L. ; ROBINS'BROWNE, ROY ; VAN DER KLIS, FIONA R. M. ; CURTIS, NIGEL ; ABRUZZO, VERONICA ; ALLEN, KATIE ; BONNICI, RHIAN ; CASALAZ, DAN ; ELBOROUGH, HANNAH ; FREYNE, BRIDGET ; GARDINER, KAYA ; GERMANO, SUSIE ; KOLLMANN, TOBIAS ; MESSINA, NICOLE ; MORRISON, CLARE ; NAKAYA, HELDER ; PONSONBY, ANNE LOUISE ; et.al. Biological sex influences antibody responses to routine vaccinations in the first year of life. ACTA PAEDIATRICA. v. 109, p. 147-157, 2020. Qualis: A2
197.	ZIMPEL, CRISTINA KRAEMER ; PATANÉ, JOSÉ SALVATORE L. ; GUEDES, AURELIANO COELHO PROENÇA ; de Souza, Robson F. ; SILVA-PEREIRA, TAIANA T. ; CAMARGO, NAILA C. SOLER ; DE SOUZA FILHO, ANTÔNIO F. ; IKUTA, CÁSSIA Y. ; NETO, JOSÉ SOARES FERREIRA ; SETUBAL, JOÃO CARLOS ; HEINEMANN, MARCOS BRYAN ; GUIMARAES, ANA MARCIA SA. Global Distribution and Evolution of Mycobacterium bovis Lineages. Frontiers in Microbiology. v. 509125, p. 1-12, 2020. Qualis: A1

2019

1.	ADHIKARI, KAUSTUBH ; MENDOZA-REVILLA, JAVIER ; SOHAIL, ANOOD ; FUENTES-GUAJARDO, MACARENA ; LAMPERT, JODIE ; CHACÓN-DUQUE, JUAN CAMILO ; HURTADO, MALENA ; VILLEGAS, VALERIA ; GRANJA, VANESSA ; ACUÑA-ALONZO, VICTOR ; JARAMILLO, CLAUDIA ; ARIAS, WILLIAM ; LOZANO, RODRIGO BARQUERA ; EVERARDO, PAOLA ; GÓMEZ-VALDÉS, JORGE ; VILLAMIL-RAMÍREZ, HUGO ; SILVA DE CERQUEIRA, CAIO C. ; HUNEMEIER, TÁBITA ; RAMALLO, VIRGINIA ; SCHULER-FACCINI, LAVINIA ; et.al. A GWAS in Latin Americans highlights the convergent evolution of lighter skin pigmentation in Eurasia. Nature Communications. v. 10, p. 358, 2019. Qualis: A1
2.	ALVES, C. C. ; DONADI, E. A. ; Giuliatti, S.. Insights of the IRF1 DNA Binding Domain: Modeling and Dynamics of its 3D Structure. Em: X-meeting 2019 ? 15th International Conference of the AB3C, 2019, Campos do Jordão, SP. Proceedings X-Meeting 2019, v. 1, p. 202-202, 2019.
3.	ALVES, WONDER ALEXANDRE LUZ ; Gobber, Charles Ferreira ; da Silva, Dennis José ; MORIMITSU, ALEXANDRE ; HASHIMOTO, RONALDO FUMIO ; MARCOTEGUI, BEATRIZ. Ultimate Levelings with Strategy for Filtering Undesirable Residues Based on Machine Learning. Em: Burgeth B., Kleefeld A., Naegel B., Passat N., Perret B.. (Org.). Lecture Notes in Computer Science. 1ed. : Springer International Publishing. 2019.v. 11564, p. 297-309.
4.	AMANN, RUDOLF I. ; BAICHOO, SHAKUNTALA ; BLENCOWE, BENJAMIN J. ; BORK, PEER ; BORODOVSKY, MARK ; BROOKSBANK, CATH ; CHAIN, PATRICK S. G. ; COLWELL, RITA R. ; DAFFONCHIO, DANIELE G. ; DANCHIN, ANTOINE ; DE LORENZO, VICTOR ; DORRESTEIN, PIETER C. ; FINN, ROBERT D. ; FRASER, CLAIRE M. ; GILBERT, JACK A. ; HALLAM, STEVEN J. ; HUGENHOLTZ, PHILIP ; IOANNIDIS, JOHN P. A. ; JANSSON, JANET K. ; SETUBAL, J. C. ; et.al. Toward unrestricted use of public genomic data. SCIENCE. v. 363, p. 350-352, 2019. Qualis: A1
5.	AMARAL, MURILO S ; GOULART, ERNESTO ; CAIRES-JÚNIOR, LUIZ CARLOS ; MORALES-VICENTE, DAVID A. ; SOARES-SCHANOSKI, ALESSANDRA ; GOMES, R. P. ; OLBERG, GIOVANNA G. O. ; ASTRAY, RENATO MANCINI ; KALIL, JORGE ; Zatz, Mayana ; Verjovski-Almeida, S.. Differential gene expression elicited by ZIKV infection in trophoblasts from congenital Zika syndrome discordant twins. https://www.biorxiv.org/content/10.1101/867465v2.full. 2019. preprint
6.	BANDO ; IAMASHITA ; SILVA ; COSTA ; ABE ; BERTONHA ; GUTH ; Fujita ; MOREIRA-FILHO. Dynamic Gene Network Analysis of Caco-2 Cell Response to Shiga Toxin-Producing Escherichia coli-Associated Hemolytic-Uremic Syndrome. Microorganisms. v. 7, p. 195-217, 2019. Qualis: B1
7.	BAPTISTA, M.S. ; ALVES, M.J.M. ; ARANTES, G.M. ; ARMELIN, H.A. ; AUGUSTO, O. ; BALDINI, R.L. ; BASSERES, D.S. ; BECHARA, E.J.H. ; BRUNI-CARDOSO, A. ; CHAIMOVICH, H. ; COLEPICOLO NETO, P. ; COLLI, W. ; CUCCOVIA, I.M. ; DA-SILVA, A.M. ; DI MASCIO, P. ; FARAH, S.C. ; Ferreira, C. ; FORTI, F.L. ; GIORDANO, R.J. ; Verjovski-Almeida, S. ; et.al. Where do we aspire to publish? A position paper on scientific communication in biochemistry and molecular biology. Brazilian Journal of Medical and Biological Research (on line). v. 52, p. 1414-431x201989, 2019. Qualis: A4
8.	BARROS-CARVALHO, GESIELE ALMEIDA ; HUNGRIA, MARIANGELA ; LOPES, FABRÍCIO MARTINS ; VAN SLUYS, MARIE-ANNE. Brazilian-adapted soybean Bradyrhizobium strains uncover IS elements with potential impact on biological nitrogen fixation. FEMS Microbiology Letters. v. 366, p. fnz046, 2019. Qualis: B2
9.	Barroso da Silva, Fernando L.; ETCHEBEST, C. ; POVEDA CUEVAS, SERGIO ALEJANDRO. Painel: On the Identification of Interactive Amino Acids for Antibody Design in Flavivirus By Electrostatic Methods. 2019. Apresentação de Trabalho/Congresso
10.	Barroso da Silva, Fernando L.; STERPONE, F. ; DERREUMAUX, PHILIPPE. OPEP6: A new constant-pH Molecular Dynamics simulation scheme with OPEP coarse-grained force field. Journal of Chemical Theory and Computation. v. 15, p. 3875-3888, 2019. Qualis: A1
11.	barroso da silva, fernando luis. Palestra convidada: ?Reviewing the peculiar physical phenomena in pH-dependent biomolecular interactions? (NCSU/EUA). 2019. Apresentação de Trabalho/Conferência ou palestra
12.	Barroso da Silva, Fernando Luís. Palestra convidada: Developing and applying fast constant pH methods in biological systems: From biomaterials to virus (UPSud/Franca). 2019. Apresentação de Trabalho/Conferência ou palestra
13.	Barroso da Silva, Fernando Luís. Palestra convidada: Developing and applying fast constant pH methods in biological systems: From biomaterials to virus (INTS/Franca). 2019. Apresentação de Trabalho/Conferência ou palestra
14.	BEGCY, KEVIN ; MARIANO, EDUARDO D ; Lembke, Carolina G ; ZINGARETTI, SONIA MARLI ; Souza, Glaucia M ; ARAÚJO, PEDRO ; Menossi, Marcelo. Overexpression of an evolutionarily conserved drought-responsive sugarcane gene enhances salinity and drought resilience. ANNALS OF BOTANY. v. 124, p. 691-700, 2019. Qualis: A1
15.	BRAGA, STEFANIA PEGORIN ; DOS SANTOS, ALEXANDRE PAES ; PAGANINI, THAIS ; BARBOSA, DEIBS ; EPAMINO, GEORGE WILLIAN CONDOMITTI ; MORAIS, CARLOS ; MARTINS, LAYLA FARAGE ; SILVA, ALINE MARIA ; SETUBAL, JOÃO CARLOS ; VALLIM, MARCELO AFONSO ; PASCON, RENATA CASTIGLIONI. First report of cis-1,4-polyisoprene degradation by Gordonia paraffinivorans. BRAZILIAN JOURNAL OF MICROBIOLOGY. v. 19, p. 1051-1062, 2019. Qualis: B1
16.	BRENTANI, H. P. Uso da bioinformática para achar subgrupos de TEA. 2019. Apresentação de Trabalho/Simpósio
17.	BRENTANI, H. P. Como surge o TEA?. 2019. Apresentação de Trabalho/Simpósio
18.	BUCKERIDGE, M. S. Bases Históricas e Científicas da Ética Socioambiental. Em: L.F. Florit, C.A.C., Sampaio, A. Philippi Jr.. (Org.). Ética Socioambiental. 1ed.São Paulo. : Manole. 2019.v. 1, p. 152-160.
19.	BUCKERIDGE, M. S.; Philippi Jr., A. ; Yourg, R.. Combate às mudanças climáticas nas cidades. Em: P.R.Jacobi e E.Trani. (Org.). Planejando o futuro hoje: ODS 13, Adaptação e Mudanças Climáticas em São Paulo. 1ed.São Paulo. : IEE-USP. 2019.v. 1, p. 35-35.
20.	BUCKERIDGE, M.S. INFRAESTRUTURA VERDE corredores ecológicos, áreas protegidas, recuperação de áreas degradadas e soluções baseadas na natureza. 2019. Apresentação de Trabalho/Congresso
21.	BUCKERIDGE, M.S. Palestra Inaugural. 2019. Apresentação de Trabalho/Conferência ou palestra
22.	Buckeridge, Marcos S.; GRANDIS, ADRIANA ; TAVARES, EVELINE Q.P.. Disassembling the Glycomic Code of Sugarcane Cell Walls to Improve Second-Generation Bioethanol Production. Bioethanol Production from Food Crops. 1ed. Em: . : Elsevier. 2019.p. 31-43.
23.	BUCKERIDGE, MS. Ciência e Sociedade: o impacto científico e suas implicações para o Estado de São Paulo. 2019. Apresentação de Trabalho/Conferência ou palestra
24.	CAMILO, CAROLINE ; Maschietto, Mariana ; VIEIRA, HENRIQUE C. ; TAHIRA, ANA C. ; GOUVEIA, GISELE R. ; FEIO DOS SANTOS, ANA C. ; NEGRÃO, ANDRÉ B. ; RIBEIRO, MARCELO ; LARANJEIRA, RONALDO ; Vallada, Homero ; BRENTANI, HELENA. Genome-wide DNA methylation profile in the peripheral blood of cocaine and crack dependents. REVISTA BRASILEIRA DE PSIQUIATRIA. v. 41, p. 485-493, 2019. Qualis: B1
25.	CANESCHI, WASHINGTON LUIZ ; SANCHEZ, ANGÉLICA BIANCHINI ; FELESTRINO, ÉRICA BARBOSA ; LEMES, CAMILA GRACYELLE DE CARVALHO ; CORDEIRO, ISABELLA FERREIRA ; FONSECA, NATASHA PEIXOTO ; VILLA, MORGHANA MARINA ; VIEIRA, IZADORA TABUSO ; MORAES, LAURO ÂNGELO GONÇALVES ; ASSIS, RENATA DE ALMEIDA BARBOSA ; DO CARMO, FLÁVIO FONSECA ; KAMINO, LUCIANA HIROMI YOSHINO ; SILVA, ROBSON SOARES ; FERRO, JESUS APARECIDO ; FERRO, MARIA INÊS TIRABOSCHI ; FERREIRA, RAFAEL MARINI ; SANTOS, VERA LÚCIA ; SILVA, UBIANA DE CÁSSIA MOURÃO ; ALMEIDA, NALVO FRANCO ; SETUBAL, J. C. ; et.al. Serratia liquefaciens FG3 isolated from a metallophyte plant sheds light on the evolution and mechanisms of adaptive traits in extreme environments. Scientific Reports. v. 9, p. 18006, 2019. Qualis: A2
26.	CARDOZO, LUCAS E. ; RUSSO, PEDRO S. T. ; GOMES-CORREIA, BRUNO ; ARAUJO-PEREIRA, MARIANA ; SEPÚLVEDA-HERMOSILLA, GONZALO ; MARACAJA-COUTINHO, VINICIUS ; Nakaya, Helder I.. webCEMiTool: Co-expression Modular Analysis Made Easy. Frontiers in Genetics. v. 10, p. 1, 2019. Qualis: A2
27.	CARNEIRO, V. C. ; SILVA, I C A ; AMARAL, MURILO ; PEREIRA, ADRIANA S. A. ; SILVEIRA, GILBERT O. ; PIRES, DAVID S ; Verjovski-Almeida, S. ; DEKKER, F. J. ; ROTILI, D. ; MAI, A. ; TORRES, E. J. L. ; ROBAA, D. ; SIPPL, W. ; Pierce, Raymond J. ; BORRELLO, M. T. ; GANESAN, A. ; LANCELOT, J. ; THIENGO, S. ; FERNANDEZ, M. A. ; VICENTINO, A. R. R. ; et.al. Pharmacological inhibition of lysine-specific demethylase 1 (LSD1) induces global transcriptional deregulation and ultrastructural alterations that impair viability in Schistosoma mansoni. https://www.biorxiv.org/content/10.1101/829549v2.full. 2019. LSD1) induces global transcriptional deregulation and ultrastructural alterations that impair viability in Schistosoma mansoni. https://www.biorxiv.org/content/10.1101/829549v2.full, 2019 (preprint
28.	CASTILLO, W. O. ; Giuliatti, S.. Exploración in síllco de Compuestos de Origen Natural con Potencial Anti-Alzheimer. 2019. Apresentação de Trabalho/Congresso
29.	CASTILLO, W. O. ; Giuliatti, Silvana. Modelling Tertiary Structure of lncRNA related to Alzheimer's Disease. 2019. Apresentação de Trabalho/Congresso
30.	CINTHO OZAHATA, MINA ; PAGE, GRIER P. ; GUO, YUELONG ; FERREIRA, J. E. ; DINARDO, CARLA LUANA ; Carneiro-Proietti, A. B. ; Loureiro, Paula ; MOTA, ROSIMERE AFONSO ; RODRIGUES, DANIELA O.W. ; BELISARIO, ANDRÉ ROLIM ; MAXIMO, CLAUDIA ; FLOR-PARK, MIRIAM V. ; Custer, Brian ; KELLY, SHANNON ; SABINO, ESTER CERDEIRA. Clinical and Genetic Predictors of Priapism in Sickle Cell Disease: Results from the Recipient Epidemiology and Donor Evaluation Study III Brazil Cohort Study. Journal of Sexual Medicine. v. 16, p. 1988-1999, 2019. Qualis: A1 (THE JOURNAL OF SEXUAL MEDICINE)
31.	Contato, A.G. ; Aranha, G.M. ; SCARCELLA, A. S. A. ; PASIN, T. M. ; FREITAS, E. N. ; BUCKERIDGE, M.S. ; POLIZELI, MARIA DE. Optimization of fungal xyloglucanase and lichenase production by factory design. 2019. Apresentação de Trabalho/Congresso
32.	CORRÊA, THAMY LÍVIA RIBEIRO ; JÚNIOR, ATÍLIO TOMAZINI ; WOLF, LÚCIA DANIELA ; BUCKERIDGE, MARCOS SILVEIRA ; DOS SANTOS, LEANDRO VIEIRA ; MURAKAMI, MARIO TYAGO. An actinobacteria lytic polysaccharide monooxygenase acts on both cellulose and xylan to boost biomass saccharification. Biotechnology for Biofuels. v. 12, p. 1, 2019. Qualis: A1
33.	CORTESE, TATIANA TUCUNDUVA PHILIPPI ; COUTINHO, SONIA VIGGIANI ; VASCONCELLOS, MARIA DA PENHA ; BUCKERIDGE, MARCOS SILVEIRA. Tecnologias e sustentabilidade nas cidades. ESTUDOS AVANÇADOS (ONLINE). v. 33, p. 137-150, 2019. Qualis: A1
34.	DA COSTA, ZIRLANE PORTUGAL ; CAUZ-SANTOS, LUIZ AUGUSTO ; RAGAGNIN, GEOVANI TOLFO ; Van Sluys, Marie-Anne ; DORNELAS, MARCELO CARNIER ; BERGES, HÉLÈNE ; DE MELLO VARANI, ALESSANDRO ; Vieira, Maria Lucia Carneiro. Transposable element discovery and characterization of LTR-retrotransposon evolutionary lineages in the tropical fruit species Passiflora edulis. MOLECULAR BIOLOGY REPORTS. v. 46, p. 6117, 2019. Qualis: B1
35.	da Silva, Aline M. Host-range determinants and potential for phage therapy of three novel Pseudomonas aeruginosa phages. 2019. Apresentação de Trabalho/Conferência ou palestra
36.	da Silva, Aline M. Determinantes da interação específica fago-Pseudomonas aeruginosa. 2019. Apresentação de Trabalho/Conferência ou palestra
37.	da Silva, Aline M. Determinantes da interação específica fago-Pseudomonas aeruginosa. 2019. Apresentação de Trabalho/Conferência ou palestra
38.	da Silva, Aline M. Estudo de comunidades microbianas e suas implicações ecológicas. 2019. Apresentação de Trabalho/Conferência ou palestra
39.	da Silva, Dennis José ; ALVES, WONDER ALEXANDRE LUZ ; MORIMITSU, ALEXANDRE ; Gobber, Charles Ferreira ; HASHIMOTO, RONALDO FUMIO. Incremental Bit-Quads Count in Tree of Shapes. Em: Burgeth B., Kleefeld A., Naegel B., Passat N., Perret B.. (Org.). Lecture Notes in Computer Science. 1ed. : Springer International Publishing. 2019.v. 11564, p. 162-173.
40.	DASILVA, LUCAS F ; TAHIRA, A. C. ; MESEL, VINÍCIUS ; Verjovski-Almeida S. A Deep Learning approach predicts the impact of point mutations in intronic flanking regions on micro-exon splicing definition. https://www.biorxiv.org/content/10.1101/868786v1.full. 2019. preprint
41.	DE ALMEIDA, JOÃO PAULO PEREIRA ; VÊNCIO, RICARDO Z. N. ; LORENZETTI, ALAN P. R. ; CATEN, FELIPE TEN- ; GOMES-FILHO, JOSÉ VICENTE ; Koide, Tie. The Primary Antisense Transcriptome of Halobacterium salinarum NRC-1. Genes. v. 10, p. 280, 2019. Qualis: A2
42.	DE CARVALHO, SUZI P. ; DE ALMEIDA, JÉSSICA B. ; FREITAS, L. M. ; GUIMARÃES, A. M. S. ; NASCIMENTO, N. C. ; SANTOS, A. P. ; CAMPOS, GUILHERME B. ; MESSICK, J. B. ; TIMENETSKY, J. ; MARQUES, L. M.. Genomic profile of Brazilian methicillin-resistant Staphylococcus aureus resembles clones dispersed worldwide.. JOURNAL OF MEDICAL MICROBIOLOGY. v. 1, p. 1-1, 2019. Qualis: B2
43.	DE LIMA, DIÓGENES S. ; CARDOZO, LUCAS E. ; MARACAJA-COUTINHO, VINICIUS ; Suhrbier, Andreas ; MANE, KARIM ; JEFFRIES, DAVID ; SILVEIRA, EDUARDO L. V. ; AMARAL, PAULO P. ; RAPPUOLI, RINO ; DE SILVA, THUSHAN I. ; Nakaya, Helder I.. Long noncoding RNAs are involved in multiple immunological pathways in response to vaccination. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. v. 1, p. 201822046, 2019. Qualis: A1
44.	DEVENDRAN, SARAVANAN ; SHRESTHA, RACHANA ; Alves, João M. P. ; WOLF, PATRICIA G. ; LY, LINDSEY ; HERNANDEZ, ALVARO G. ; MÉNDEZ-GARCÍA, CELIA ; INBODEN, ASHLEY ; WILEY, J'NAI ; PAUL, OINDRILA ; ALLEN, AVERY ; SPRINGER, EMILY ; WRIGHT, CHRIS L. ; FIELDS, CHRISTOPHER J. ; DANIEL, STEVEN L. ; RIDLON, JASON M.. ATCC 35704: Integration of Nutritional Requirements, the Complete Genome Sequence, and Global Transcriptional Responses to Bile Acids. APPLIED AND ENVIRONMENTAL MICROBIOLOGY (ONLINE). v. 85, p. e00052-19, 2019. Qualis: A1
45.	DINIZ, AUGUSTO L. ; FERREIRA, SÁVIO S. ; TEN-CATEN, FELIPE ; MARGARIDO, GABRIEL R.A. ; DOS SANTOS, JOÃO M. ; BARBOSA, GERALDO V. DE S. ; CARNEIRO, MONALISA S. ; Souza, Glaucia M.. Genomic resources for energy cane breeding in the post genomics era. COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. v. 17, p. 1404-1414, 2019. Qualis: Não identificado (COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL)
46.	DURHAM, A. M. Alinhamento de Sequências. 2019. Apresentação de Trabalho/Conferência ou palestra
47.	ESPADA, CAROLINE R. ; MAGALHÃES, RUBENS M. ; CRUZ, MARIO C. ; MACHADO, PAULO R. ; SCHRIEFER, ALBERT ; CARVALHO, EDGAR M. ; HORNILLOS, VALENTÍN ; Alves, João M. ; CRUZ, ANGELA K. ; COELHO, ADRIANO C. ; ULIANA, SILVIA R.B.. Investigation of the pathways related to intrinsic miltefosine tolerance in Leishmania (Viannia) braziliensis clinical isolates reveals differences in drug uptake. International Journal for Parasitology-Drugs and Drug Resistance. v. 11, p. 139-147, 2019. Qualis: A1 (INTERNATIONAL JOURNAL FOR PARASITOLOGY: DRUGS AND DRUG RESISTANCE)
48.	FABRIS, ANDRÉ LUIS ; NUNES, ANDRE VINICIUS ; SCHUCH, VIVIANE ; DE PAULA-SILVA, MARINA ; OLIVEIRA DA ROCHA, GUSTAVO HENRIQUE ; Nakaya, Helder I. ; HO, PAULO LEE ; SILVEIRA, EDUARDO L.V. ; FARSKY, SANDRA HELENA POLISELLI. Hydroquinone exposure alters the morphology of lymphoid organs in vaccinated C57Bl/6 mice. ENVIRONMENTAL POLLUTION. v. 1, p. 113554, 2019. Qualis: B4
49.	FACHI, JOSÉ LUÍS ; FELIPE, JAQUELINE DE SOUZA ; PRAL, LAÍS PASSARIELLO ; DA SILVA, BRUNA KARADI ; CORRÊA, RENAN OLIVEIRA ; DE ANDRADE, MIRELLA CRISTINY PEREIRA ; DA FONSECA, DENISE MORAIS ; BASSO, PAULO JOSÉ ; CÂMARA, NIELS OLSEN SARAIVA ; DE SALES E SOUZA, ÉRICKA LORENNA ; DOS SANTOS MARTINS, FLAVIANO ; GUIMA, SUZANA EIKO SATO ; THOMAS, ANDREW MALTEZ ; SETUBAL, JOÃO CARLOS ; MAGALHÃES, YULI THAMIRES ; FORTI, FÁBIO LUIS ; CANDREVA, THAMIRIS ; RODRIGUES, HOSANA GOMES ; DE JESUS, MARCELO BISPO ; CONSONNI, SÍLVIO ROBERTO ; et.al. Butyrate Protects Mice from Clostridium difficile-Induced Colitis through an HIF-1-Dependent Mechanism. Cell Reports. v. 27, p. 750-761.e7, 2019. Qualis: A1
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51.	FATORI, D. ; MATIJASEVITCH, A. ; BRENTANI. H ; MIGUEL, E. C. ; POLANCZYK, G.. Maternal care and its association with depression and stress: a smartphone daily diary study in the context of a home-visiting intervention for adolescent mothers living in adverse conditions in São Paulo, Brazil. Em: 66th Annual Meeting of the American Academy of Child & Adolescent Psychiatry, 2019, Chicago. J Am Acad Child Adolesc Psychiatry, v. 58, p. S204, 2019.
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113.	NAKAYA, H. I.; HOFFMANN, C.. (Bonn University-USP meeting @ USP) One Health: Sustainability and Digitalisation of food supply chains. 2019. Apresentação de Trabalho/Simpósio
114.	Nakaya, Helder I. (UNICAMP@Ciclo de Seminários IB) Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
115.	Nakaya, Helder I. (GPCR signaling and drug discovery Meeting@FCF) Palestrante convidado. 2019. Apresentação de Trabalho/Conferência ou palestra
116.	Nakaya, Helder Imoto. I ESCOLA LATINO-AMERICANA DE BIOINFORMÁTICA PARA AS CIÊNCIAS ÔMICAS @ LNCC. Palestrante convidado. 2019. Apresentação de Trabalho/Simpósio
117.	Nakaya, Helder Imoto. European Bioinformatics Institute (EMBL-EBI) @ Cambridge, Inglaterra. Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
118.	Nakaya, Helder Imoto. University of Sheffield Medical School @ Sheffield, Inglaterra. Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
119.	Nakaya, Helder Imoto. 55º Congresso da Sociedade Brasileira de Medicina Tropical @ Belo Horizonte. Palestrante convidado. 2019. Apresentação de Trabalho/Congresso
120.	Nakaya, Helder Imoto. Biologia Integrativa @ 3o webinar da série promovida pela SBI. Palestrante convidado. 2019. Apresentação de Trabalho/Simpósio
121.	Nakaya, Helder Imoto. Conecta SIM 2019 - Microbiologia interligada @ VI Simpósio de Microbiologia da UFMG. Palestrante convidado. 2019. Apresentação de Trabalho/Simpósio
122.	Nakaya, Helder Imoto. XXXIV Reunião Anual da FeSBE @ Campos do Jordão. Palestrante convidado. 2019. Apresentação de Trabalho/Congresso
123.	Nakaya, Helder Imoto. Human Cell Atlas internal meeting @ USP. Palestrante convidado. 2019. Apresentação de Trabalho/Simpósio
124.	Nakaya, Helder Imoto. 65 Congresso Brasileiro de Genética @ Águas de Lindoia. Palestrante convidado. 2019. Apresentação de Trabalho/Congresso
125.	Nakaya, Helder Imoto. VSV EBOPLUS interim review @ Brussels. Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
126.	Nakaya, Helder Imoto. Bioinformática na LIV SUPFAB na Semana Paulista de Farmácia e Bioquímica @ São Carlos. Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
127.	Nakaya, Helder Imoto. 30º Congresso Brasileiro de Microbiologia @ Maceió. Palestrante convidado. 2019. Apresentação de Trabalho/Congresso
128.	Nakaya, Helder Imoto. Programa de Pós-Graduação em Psiquiatria e Psicologia Médica @ UNIFESP. Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
129.	Nakaya, Helder Imoto. Palestra para o laboratório do dr. Albert Barabási @ Boston, EUA. Palestrante convidado. 2019. Apresentação de Trabalho/Seminário
130.	Nakaya, Helder Imoto. EULAC PerMed Technical Workshop @ Montevideo, Uruguai. Palestrante convidado. 2019. Apresentação de Trabalho/Simpósio
131.	NAKAYA, HELDER TAKASHI IMOTO. Palestrante convidado no Celebrating the 10th Anniversary of SoIBio and 10th Anniversary of the Master in Bioinformatics Uruguay. 2019. Apresentação de Trabalho/Conferência ou palestra
132.	NAKAYA, HELDER TAKASHI IMOTO. Palestrante convidado no INOVIQ Feira de Inovação e 7 º workshop da pós-graduação do IQUSP. 2019. Apresentação de Trabalho/Simpósio
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137.	PALMEIRO, JUSSARA KASUKO ; de SOUZA, Robson Francisco ; SCHÖRNER, MARCOS ANDRÉ ; PASSARELLI-ARAUJO, HEMANOEL ; GRAZZIOTIN, ANA LAURA ; VIDAL, NEWTON MEDEIROS ; VENANCIO, THIAGO MOTTA ; DALLA-COSTA, LIBERA MARIA. Molecular Epidemiology of Multidrug-Resistant Klebsiella pneumoniae Isolates in a Brazilian Tertiary Hospital. Frontiers in Microbiology. v. 10, p. 1669, 2019. Qualis: A1
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140.	Patané, José S. L. ; MARTINS-JUNIOR, JOAQUIM ; RANGEL, LUIZ THIBERIO ; Varani, A. ; DIGIAMPIETRI, Luciano A. ; FACINCANI, AGDA P. ; WANG, NIAN ; FERRO, Jesus ; Almeida, N. F. ; Moreira, Leandro M ; Setubal, João C. Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses. BMC GENOMICS. v. 20, p. 700, 2019. Qualis: A2
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156.	Setubal, Joao C. Genome-resolved composting. 2019. Apresentação de Trabalho/Conferência ou palestra
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159.	SILVA, DENNIS J. ; ALVES, WONDER A.L. ; HASHIMOTO, RONALDO FUMIO. Incremental bit-quads count in component trees: theory, algorithms, and optimization. PATTERN RECOGNITION LETTERS. v. 129, p. 33-40, 2019. Qualis: A2
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162.	SILVA, MATHEUS MOLINA ; ROCHA, CLARISSA RIBEIRO REILY ; KINKER, GABRIELA SARTI ; PELEGRINI, ALESSANDRA LUIZA ; Menck, Carlos Frederico Martins. The balance between NRF2/GSH antioxidant mediated pathway and DNA repair modulates cisplatin resistance in lung cancer cells. Scientific Reports. v. 9, p. 17639, 2019. Qualis: A2
163.	SILVA, NATALIA MARIA ; DE OLIVEIRA, ALINE MÁRCIA SILVA ARAÚJO ; PEGORIN, STEFANIA ; GIUSTI, CAMILA ESCANDURA ; FERRARI, VITOR BATISTA ; BARBOSA, DEIBS ; MARTINS, LAYLA FARAGE ; MORAIS, CARLOS ; SETUBAL, JOÃO CARLOS ; VASCONCELLOS, SUZAN PANTAROTO ; DA SILVA, ALINE MARIA ; DE OLIVEIRA, JULIO CEZAR FRANCO ; PASCON, RENATA CASTIGLIONI ; VIANA-NIERO, CRISTINA. Characterization of novel hydrocarbon-degrading Gordonia paraffinivorans and Gordonia sihwensis strains isolated from composting. PLoS One. v. 14, p. e0215396, 2019. Qualis: A1
164.	SILVA-PEREIRA, T. T. ; IKUTA, CÁSSIA YUMI ; ZIMPEL, CRISTINA KRAEMER ; CAMARGO, N. C. S. ; SOUZA, A. F. ; FERREIRA NETO, JOSÉ SOARES ; HEINEMANN, MARCOS BRYAN ; GUIMARÃES, A. M. S.. Genome sequencing of Mycobacterium pinnipedii strains: genetic characterization and evidence of superinfection in a South American sea lion (Otaria flavescens). BMC GENOMICS. v. 20, p. 1030, 2019. Qualis: A2
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173.	SYED, W. A. P. ; GIULIATTI, S. Análise Estrutural e Funcional dos Polimorfismos da CYP2C19 no Atracamento de Pequenas Moléculas. Em: 27º SIICUSP: Simpósio Internacional de Iniciação Científica da Universidade de São Paulo, 2019, Ribeirão Preto e São Paulo, SP. Anais, v. 27, p. 1-1, 2019.
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178.	TOZATTO-MAIO, KARINA ; GIROT, ROBERT ; LY, INDOU DEME ; ROCHA, VANDERSON ; PINTO, ANA CRISTINA SILVA ; DIAGNE, IBRAHIMA ; BENZERARA, YAHIA ; FERNANDES, FRANCISCO ; DINARDO, CARLA LUANA ; KASHIMA, SIMONE ; ARAUJO, ITAUA LESTON ; KENZEY, CHANTAL ; FONSECA, GUILHERME HENRIQUE HENCKLAIN ; RODRIGUES, EVANDRA STRAZZA ; VOLT, FERNANDA ; JARDULI, LUCIANA RIBEIRO ; RUGGERI, ANNALISA ; MARIASELVAM, CHRISTINA MARY ; GUALANDRO, SANDRA FATIMA MENOSI ; SOLER, J. M. P. ; et.al. Polymorphisms in Inflammatory Genes Modulate the Occurrence of Clinical Complications in Patients with Sickle Cell Disease. BLOOD. v. 134, p. 4825-4825, 2019. Qualis: A1
179.	TRINDADE, SERGIO C. ; NOGUEIRA, LUIZ A. HORTA ; Souza, Glaucia M.. Relevance of LACAf biofuels for global sustainability. BIOFUELS. v. 2019, p. 1-11, 2019. Qualis: B1
180.	URBANSKI, ALYSSON H. ; Araujo, José D. ; Creighton, Rachel ; Nakaya, Helder I.. Integrative Biology Approaches Applied to Human Diseases. Computational Biology. 1ed. Em: . : Codon Publications. 2019.p. 19-36.
181.	WILEY, K. ; CAMILO, C. ; GOUVEIA, G. ; EUCLYDES, V. L. V. ; POLANCZYK, G. ; MIGUEL, E. C. ; BRENTANI. H. The effects of prenatal stress on infant HPA axis function at 12-months: hormonal and epigenetic mechanisms. Em: 44th Annual Meeting of the Human Biology Association, 2019, Cleveland. American Journal of Human Biology, v. 31, p. 60-60, 2019.
182.	YAMAMOTO, PEDRO K. ; SOUZA, TIAGO A. ; ANTIORIO, ANA T. F. B. ; ZANATTO, DENNIS A. ; GARCIA'GOMES, MARIANA DE SOUZA A. ; ALEXANDRE'RIBEIRO, SANDRA R. ; OLIVEIRA, NICASSIA DE SOUZA ; MENCK, CARLOS F. M. ; BERNARDI, MARIA M. ; MASSIRONI, SILVIA M. G. ; MORI, CLAUDIA M. C.. Genetic and behavioral characterization of a Kmt2d mouse mutant, a new model for Kabuki Syndrome. GENES BRAIN AND BEHAVIOR. v. 18, p. e12568, 2019. Qualis: Não identificado (GENES BRAIN AND BEHAVIOR)
183.	YANCY-CABALLERO, DAISON ; LING, LIU Y. ; Fujita, André ; FERREIRA, JOÃO E. ; DRIEMEIER, CARLOS. Intraparticle Connectivity in Sugarcane Bagasse Unveiled by Pore Network Modeling. BioEnergy Research. v. 12, p. 546-557, 2019. Qualis: A1
184.	ZIMPEL, CRISTINA KRAEMER ; CAMARGO, N. C. S. ; GUIMARÃES, A. M. S.. Characterization of Mycobacterium tuberculosis pseudogenes and their transcription. Em: Keystone Symposium. Tuberculosis: Mechanisms, Pathogenesis and Treatment., 2019, Banff. Tuberculosis: Mechanisms, Pathogenesis and Treatment, v. 1, p. 1, 2019.
185.	ZIMPEL, CRISTINA KRAEMER ; PATANE, J. S. L. ; GUEDES, A. C. P. ; SOUZA, R. F. ; PEREIRA, T. T. S. ; CAMARGO, N. C. S. ; SOUZA, A. F. ; IKUTA, CÁSSIA YUMI ; FERREIRA NETO, J. S. ; SETUBAL, J. C. ; HEINEMANN, MARCOS BRYAN ; GUIMARÃES, A. M. S.. Global distribution and evolution of Mycobacterium bovis lineages. bioRxiv, the preprint server for biology. 2019. BioRxiv Pre-Print
186.	ZUANETTI, DAIANE A ; SOLER, JÚLIA M PAVAN ; KRIEGER, JOSÉ E ; MILAN, LUIS A. Bayesian diagnostic analysis for quantitative trait loci mapping. STATISTICAL METHODS IN MEDICAL RESEARCH. v. 29, p. 096228021988895, 2019. Qualis: A2

2018

1.	ABUJADI, CAIO ; CROARKIN, PAUL E. ; BELLINI, BIANCA B. ; BRENTANI, HELENA ; MARCOLIN, MARCO A.. Intermittent theta-burst transcranial magnetic stimulation for autism spectrum disorder: an open-label pilot study. REVISTA BRASILEIRA DE PSIQUIATRIA. v. 40, p. 309-311, 2018. Qualis: B1
2.	ALVES, WONDER A. L. ; Gobber, Charles F. ; HASHIMOTO, RONALDO F.. Plant Bounding Box Detection from Desirable Residues of the Ultimate Levelings. Em: Campilho A., Karray F., ter Haar Romeny B.. (Org.). Lecture Notes in Computer Science. 1ed. : Springer International Publishing. 2018.v. 10882, p. 474-481.
3.	ALVEZ, W. A. L. ; GOBBER, C. ; HASHIMOTO, R. F.. Plant Bounding Box Detection from Desirable Residues of the Ultimate Levelings. Em: 15th International Conference on Image Analysis and Recognition - ICIAR 2018, v. 10882, p. 474-481, 2018.Qualis: Não identificado (15th International Conference on Image Analysis and Recognition - ICIAR 2018)
4.	AMARAL, PAULO P. ; LEONARDI, TOMMASO ; HAN, NAMSHIK ; VIRÉ, EMMANUELLE ; GASCOIGNE, DENNIS K. ; ARIAS-CARRASCO, RAÚL ; BÜSCHER, MAGDALENA ; PANDOLFINI, LUCA ; ZHANG, ANDA ; PLUCHINO, STEFANO ; MARACAJA-COUTINHO, VINICIUS ; Nakaya, Helder I. ; HEMBERG, MARTIN ; SHIEKHATTAR, RAMIN ; ENRIGHT, ANTON J. ; KOUZARIDES, TONY. Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci. GENOME BIOLOGY. v. 19, p. 1, 2018. Qualis: Não identificado (GENOME BIOLOGY)
5.	AMGARTEN, DEYVID ; BRAGA, LUCAS P. P. ; DA SILVA, ALINE M. ; Setubal, João C.. MARVEL, a Tool for Prediction of Bacteriophage Sequences in Metagenomic Bins. Frontiers in Genetics. v. 9, p. ARTN 304, 2018. Qualis: A2
6.	AMORIM, LETICIA ; GOUVEIA, FLAVIA V ; GERMANN, JÜRGEN ; ZAMBORI, DEBORA ; MORAIS, ROSA ; SATO, FLAVIA M ; FONGARO, CAMILA ; PORTOLESE, JOANA ; BRENTANI, HELENA ; MARTINEZ, RAQUEL. Oxytocin and Gynecomastia: Correlation or Causality?. Cureus. v. 10, p. e2661, 2018. Qualis: C
7.	ANTTILA, VERNERI ; BULIK-SULLIVAN, BRENDAN ; FINUCANE, HILARY K. ; WALTERS, RAYMOND K. ; BRAS, JOSE ; DUNCAN, LARAMIE ; ESCOTT-PRICE, VALENTINA ; FALCONE, GUIDO J. ; GORMLEY, PADHRAIG ; MALIK, RAINER ; PATSOPOULOS, NIKOLAOS A. ; RIPKE, STEPHAN ; WEI, ZHI ; YU, DONGMEI ; LEE, PHIL H. ; TURLEY, PATRICK ; GRENIER-BOLEY, BENJAMIN ; CHOURAKI, VINCENT ; KAMATANI, YOICHIRO ; SAMAIA, H. B. ; et.al. Analysis of shared heritability in common disorders of the brain. SCIENCE. v. 360, p. eaap8757, 2018. Qualis: A1
8.	ARIAS-CARRASCO, RAÚL ; VÁSQUEZ-MORÁN, YESSENIA ; Nakaya, Helder I. ; MARACAJA-COUTINHO, VINICIUS. StructRNAfinder: an automated pipeline and web server for RNA families prediction. BMC BIOINFORMATICS. v. 19, p. 55, 2018. Qualis: A1
9.	ARNOLD, PAUL D ; ASKLAND, KATHLEEN D ; BARLASSINA, CRISTINA ; BELLODI, LAURA ; BIENVENU, O J ; BLACK, DONALD ; BLOCH, MICHAEL ; BRENTANI, HELENA ; BURTON, CHRISTIE L ; CAMARENA, BEATRIZ ; Cappi, Carolina ; CATH, DANIELLE ; CAVALLINI, MARIA ; CONTI, DAVID ; COOK, EDWIN ; CORIC, VLADIMIR ; CULLEN, BERNADETTE A ; CUSI, DANIELLE ; DAVIS, LEA K ; DELORME, RICHARD ; et.al. Revealing the complex genetic architecture of obsessive-compulsive disorder using meta-analysis. MOLECULAR PSYCHIATRY. v. 23, p. 1181-1188, 2018. Qualis: A1
10.	AVILA, A. L. R. ; TAMAROZZI, E. R. ; GIULIATTI, S.. Análise da Variabilidade de Alelos da Proteína HLA-E. Em: 26º SIICUSP, Simpósio Internacional de Iniciação Científica e Tecnológica da USP, 2018, Ribeirão Preto, SP. Anais, p. 1-1, 2018.
11.	BARBOSA, MAYSA S. ; ALVES, R. P. S. ; CAMPOS, GUILHERME B. ; REZENDE, IZADORA S. ; FREITAS, L. M. ; CHOPRA-DEWASTHALY, R. ; FERREIRA, L. C. ; GUIMARÃES, A. M. S. ; MARQUES, L. M. ; Timenetsky, Jorge. Antigenicity of recombinant membrane proteins of Mycoplasma agalactiae. Em: 22nd Congress of the International Organization for Mycoplasmology, Program and Abstracts - IOM, 2018, Portsmouth, New Hampshire USA. 22nd Congress of the International Organization for Mycoplasmology, Program and Abstracts, v. 1, p. 80, 2018.
12.	BARROS, JÉSSICA BARLETTO DE SOUSA ; SILVA, PAULO ALEX NEVES DA ; KOGA, ROSEMARY DE CARVALHO ROCHA ; GONZALEZ-DIAS, PATRÍCIA ; CARMO FILHO, JOSÉ RODRIGUES ; NAGIB, PATRÍCIA RESENDE ALO ; COELHO, VERÔNICA ; Nakaya, Helder I. ; FONSECA, SIMONE GONÇALVES ; PFRIMER, IRMTRAUT ARACI HOFFMANN. Acute Zika Virus Infection in an Endemic Area Shows Modest Proinflammatory Systemic Immunoactivation and Cytokine-Symptom Associations. Frontiers in Immunology. v. 9, p. 1, 2018. Qualis: A1
13.	barroso da silva, f l; PASQUALI, SAMUELA ; DERREUMAUX, PHILIPPE. Painel: Developing and applying fast constant-pH simulation methods for RNA systems ? From pKa benchmarks to protein-RNA interactions. 2018. Apresentação de Trabalho/Congresso
14.	barroso da silva, fernando luis. Palestra convidada: Developing and applying fast constant pH methods in biological systems: From biomaterials to virus (Pasteur/Uruguai). 2018. Apresentação de Trabalho/Simpósio
15.	Barroso da Silva, Fernando Luís. Palestra convidada: Developing and applying fast constant pH methods in Biological systems: from biomaterials to virus (NCSU/EUA). 2018. Apresentação de Trabalho/Conferência ou palestra
16.	Barroso da Silva, Fernando Luís. Palestra convidada: Bioinformática Estrutural: de físico-química a biomateriais e vírus. 2018. Apresentação de Trabalho/Conferência ou palestra
17.	Barroso da Silva, Fernando Luís. Palestra convidada: Simulations at constant pH: theory meets experiments (UFRJ). 2018. Apresentação de Trabalho/Congresso
18.	Barroso da Silva, Fernando Luís. Palestra convidada: Developing and applying fast constant pH methods in biological systems: From biomaterials to virus (NCSU/EUA). 2018. Apresentação de Trabalho/Conferência ou palestra
19.	Barroso da Silva, Fernando Luís; Pasquali, S.. A FAST CONSTANT-PH MOLECULAR DYNAMICS SIMULATION FOR THE COARSE-GRAINED HIRE-RNA MODEL. Em: 47a Reunião Anual da SBBq, 2018, Joinville, SC. Abstracts, p. C12, 2018.
20.	Barroso da Silva, Fernando Luís; Pasquali, S. ; Derreumaux, P.. Developing and applying fast constant-pH simulation methods for RNA systems - From pKa benchmarks to protein-RNA interactions. Em: Regulatory & Non-Coding RNA?s Meeting, CSHL, 2018, Cold Spring Harbor, EUA. Regulatory & Non-Coding RNA?s Meeting. Cold Spring Harbor: CSHL, 2018.
21.	BAYER-SANTOS, ETHEL ; LIMA, LÍDIA DOS PASSOS ; CESETI, LUCAS DE MORAES ; RATAGAMI, CAMILA YURI ; DE SANTANA, ELIANE SILVA ; DA SILVA, ALINE MARIA ; FARAH, CHUCK SHAKER ; ALVAREZ-MARTINEZ, CRISTINA ELISA. Xanthomonas citri T6SS mediates resistance to Dictyostelium predation and is regulated by an ECF σ factor and cognate Ser/Thr kinase. ENVIRONMENTAL MICROBIOLOGY. v. 20, p. 1562-1575, 2018. Qualis: A1
22.	BENCKE-MALATO, MARTA ; De Souza, Amanda Pereira ; RIBEIRO-ALVES, MARCELO ; SCHMITZ, JACQUELINE FLORES ; BUCKERIDGE, M. S. ; MARCIO, ALVES-FERREIRA. Short-term responses of soybean roots to individual and combinatorial effects of elevated [CO2] and water deficit. PLANT SCIENCE. v. 280, p. 283-296, 2018. Qualis: A1
23.	BILT, M. T. V. ; BRENTANI, H. P.. Exames laboratoriais, marcadores genéticos e biomarcadores. Clínica Psiquiátrica de bolso. 2ºed.Barueri. Em: . : Manole. 2018.p. 75-83.
24.	BITTENCOURT, NAJARA C. ; LEITE, JULIANA A. ; SILVA, ANA BEATRIZ I. E. ; PIMENTA, TAMIRYS S. ; SILVA-FILHO, JOÃO LUIZ ; CASSIANO, GUSTAVO C. ; LOPES, STEFANIE C. P. ; DOS-SANTOS, JOAO C. K. ; BOURGARD, CATARINA ; Nakaya, Helder I. ; DA SILVA VENTURA, ANA MARIA REVORÊDO ; LACERDA, MARCUS V. G. ; FERREIRA, MARCELO U. ; MACHADO, RICARDO L. D. ; ALBRECHT, LETUSA ; COSTA, FABIO T. M.. Genetic sequence characterization and naturally acquired immune response to Plasmodium vivax Rhoptry Neck Protein 2 (PvRON2). MALARIA JOURNAL. v. 17, p. 1-1, 2018. Qualis: A1
25.	BRADWELL, KATIE R ; KOPARDE, VISHAL N ; MATVEYEV, ANDREY V ; SERRANO, MYRNA G ; ALVES, JOÃO M P ; PARIKH, HARDIK ; HUANG, BERNICE ; LEE, VLADIMIR ; ESPINOSA-ALVAREZ, ONEIDA ; ORTIZ, PAOLA A ; COSTA-MARTINS, ANDRÉ G ; TEIXEIRA, MARTA M G ; Buck, Gregory A. Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence. BMC GENOMICS. v. 19, p. 770, 2018. Qualis: A2
26.	BRAGA, LUCAS P. P. ; SOUCY, SHANNON M. ; AMGARTEN, DEYVID E. ; DA SILVA, ALINE M. ; Setubal, João C.. Bacterial Diversification in the Light of the Interactions with Phages: The Genetic Symbionts and Their Role in Ecological Speciation. FRONTIERS IN ECOLOGY AND EVOLUTION. v. 6, p. fevo.2018.00006, 2018. Qualis: A2
27.	BRENTANI. HP. Testes genéticos na prática clínica: o futuro já chegou?. 2018. Apresentação de Trabalho/Simpósio
28.	BUCKERIDGE, MS. Biomass Composition. 2018. Apresentação de Trabalho/Conferência ou palestra
29.	BUCKERIDGE, MS. O que o Brasil perde e o que ganha com as mudanças climáticas globais. 2018. Apresentação de Trabalho/Conferência ou palestra
30.	CAIRES-JÚNIOR, LUIZ CARLOS ; GOULART, ERNESTO ; MELO, UIRÁ SOUTO ; ARAUJO, BRUNO HENRIQUE SILVA ; ALVIZI, LUCAS ; SOARES-SCHANOSKI, ALESSANDRA ; DE OLIVEIRA, DANYLLO FELIPE ; KOBAYASHI, GERSON SHIGERU ; GRIESI-OLIVEIRA, KARINA ; MUSSO, CAMILA MANSO ; Amaral, Murilo Sena ; DASILVA, LUCAS FERREIRA ; ASTRAY, RENATO MANCINI ; SUÁREZ-PATIÑO, SANDRA FERNANDA ; VENTINI, DANIELLA CRISTINA ; DA SILVA, SÉRGIO GOMES ; YAMAMOTO, GUILHERME LOPES ; EZQUINA, SUZANA ; NASLAVSKY, MICHEL SATYA ; Verjovski-Almeida, S. ; et.al. Publisher Correction: Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells. Nature Communications. v. 9, p. 1114, 2018. Qualis: A1
31.	CARNEIRO-PROIETTI, ANNA B. F. ; KELLY, SHANNON ; MIRANDA TEIXEIRA, CAROLINA ; Sabino, Ester C. ; ALENCAR, CECILIA S. ; Capuani, Ligia ; SALOMON SILVA, TASSILA P. ; ARAUJO, ADERSON ; LOUREIRO, PAULA ; MÁXIMO, CLÁUDIA ; LOBO, CLARISSE ; FLOR-PARK, MIRIAM V. ; RODRIGUES, DANIELA O. W. ; MOTA, ROSIMERE A. ; Gonçalez, Thelma T. ; HOPPE, CAROLYN ; Ferreira, João E. ; OZAHATA, MINA ; PAGE, GRIER P. ; GUO, YUELONG ; et.al. Clinical and genetic ancestry profile of a large multi-centre sickle cell disease cohort in Brazil. BRITISH JOURNAL OF HAEMATOLOGY. v. 1, p. bjh.15462, 2018. Qualis: A2
32.	CASTILLO, W. O. ; GIULIATTI, S.. Assessment of the Acetylcholinesterase Inhibitory Activity of Amaryllidaceae Family Alkaloids by Molecular Docking. Em: XV Congreso Colombiano y IX Congreso Internacional de Genética Humana, 2018, Barranquilla. Resúmenes. Santa Marta, Colômbia: Universidad del Magdalena, v. 16, p. 36-37, 2018.
33.	CASTILLO, WILLIAN ORLANDO ; Giuliatti, Silvana. Assessment of the Acetylcholinesterase Inhibitory Activity of Amaryllidaceae Family Alkaloids by Molecular Docking. Em: XV Congreso Colombiano y IX Congreso Internacional de Genética Humana, 2019, Barranquilla. Duazary. Santa Marta, Colômbia: Universidad del Magdalena, v. 16, p. 91-91, 2018.
34.	CHACÓN-DUQUE, JUAN-CAMILO ; ADHIKARI, KAUSTUBH ; FUENTES-GUAJARDO, MACARENA ; MENDOZA-REVILLA, JAVIER ; ACUÑA-ALONZO, VICTOR ; BARQUERA, RODRIGO ; QUINTO-SÁNCHEZ, MIRSHA ; GÓMEZ-VALDÉS, JORGE ; EVERARDO MARTÍNEZ, PAOLA ; VILLAMIL-RAMÍREZ, HUGO ; Hünemeier, Tábita ; RAMALLO, VIRGINIA ; SILVA DE CERQUEIRA, CAIO C. ; HURTADO, MALENA ; VILLEGAS, VALERIA ; GRANJA, VANESSA ; VILLENA, MERCEDES ; VÁSQUEZ, RENÉ ; LLOP, ELENA ; SANDOVAL, JOSÉ R. ; et.al. Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance. Nature Communications. v. 9, p. 5388, 2018. Qualis: A1
35.	CIA, MARIANA CICARELLI ; CARVALHO, GISELLE ; AZEVEDO, RICARDO ANTUNES ; MONTEIRO-VITORELLO, CLAUDIA BARROS ; SOUZA, GLAUCIA MENDES ; NISHIYAMA-JÚNIOR, MILTON YUTAKA ; LEMBKE, CAROLINA GIMILIANI ; FARIA, RAPHAEL S.C.A. ; MARQUES, JOÃO PAULO RODRIGUES ; MELOTTO, MAELI ; CAMARGO, LUIS EDUARDO ARANHA. Novel insights into the early stages of ratoon stunting disease of sugarcane inferred from transcript and protein analysis. PHYTOPATHOLOGY. v. 1, p. 1-58, 2018. Qualis: A1
36.	COSTA-MARTINS, ANDRÉ G. ; Lima, Luciana ; Alves, João Marcelo P. ; Serrano, Myrna G. ; Buck, Gregory A. ; Camargo, Erney P. ; Teixeira, Marta M. G.. Genome-wide identification of evolutionarily conserved Small Heat-Shock and eight other proteins bearing α-crystallin domain-like in kinetoplastid protists. PLoS One. v. 13, p. e0206012, 2018. Qualis: A1
37.	CRUZ, J. V. ; SERAFIM, R. B. ; SILVA, G. M. ; Guiliatti, S. ; CAMPOS, J. M. ; ARAUJO NETO, M. F. ; LEITE, F. H. A. ; TAFT, C. A. ; SILVA, C. H. T. P. ; SANTOS, C. B. R.. Computational design of new protein kinase 2 inhibitors for the treatment of inflammatory diseases using QSAR, pharmacophore-structure-based virtual screening, and molecular dynamics. JOURNAL OF MOLECULAR MODELING. v. 24, p. 224, 2018. Qualis: A4
38.	CUEVAS, S. A. P. ; Barroso da Silva, Fernando L.. Painel: Análise de diferentes propriedades fisico-quimicas em variantes da proteína NS1 do vírus Zika. 2018. Apresentação de Trabalho/Simpósio
39.	CUEVAS, S. A. P. ; barroso da silva, fernando luis. Análise de diferentes propriedades fisico-quimicas em variantes da proteína NS1 do vírus Zika. Em: Curso de Verão em Bioinformática 2018, 2018, Sao Paulo. Curso de Verão em Bioinformática 2018, 2018.
40.	CUEVAS, S. A. P. ; ETCHEBEST, C. ; Barroso da Silva, Fernando Luís. Insights into the ZIKV NS1 Virology from Different Strains through a Fine Analysis of Physicochemical Properties. ACS Omega. v. 3, p. 16212-16229, 2018. Qualis: A3
41.	CUEVAS, S. A. P. ; ETCHEBEST, C. ; Barroso da Silva, Fernando Luís. Computational Analysis of the Main Physical-chemistry Properties on NS1 Protein in Zika Virus Strains. Em: 47a Reunião Anual da SBBq, 2018, Joinville, SC. Abstracts, p. C11, 2018.
42.	DA COSTA, RICARDO M F ; SIMISTER, RACHAEL ; ROBERTS, LUNED A ; TIMMS-TARAVELLA, EMMA ; CAMBLER, ARTHUR B ; CORKE, FIONA M K ; HAN, JIWAN ; WARD, RICHARD J ; BUCKERIDGE, MARCOS S ; GOMEZ, LEONARDO D ; BOSCH, MAURICE. Nutrient and drought stress: implications for phenology and biomass quality in miscanthus. ANNALS OF BOTANY. v. 1, p. 1, 2018. Qualis: A1
43.	da Silva, Aline M. Estudo de comunidades microbianas e suas implicações ecológicas. 2018. Apresentação de Trabalho/Conferência ou palestra
44.	da Silva, Aline M. Microbioma da compostagem termofílica: composição, diversidade e aplicações. 2018. Apresentação de Trabalho/Conferência ou palestra
45.	da Silva, Aline M. Outer membrane vesicles: biogenesis and functions in bacteria host interactions. 2018. Apresentação de Trabalho/Conferência ou palestra
46.	da Silva, Aline M. Insights into Xylella fastidiosa virulence and host-specificity revealed by multi‐omics approach. 2018. Apresentação de Trabalho/Conferência ou palestra
47.	da Silva, Flávia Maia ; KOSTYGOV, A. Y. ; SPODAREVA, V. V. ; BUTENKO, A. ; TOSSOU, R. ; LUKES, J. ; YURCHENKO, V. ; ALVES, JOÃO M.P.. The reduced genome of Candidatus Kinetoplastibacterium sorsogonicusi, the endosymbiont of Kentomonas sorsogonicus (Trypanosomatidae): loss of the haem-synthesis pathway. PARASITOLOGY. v. S1, p. 1-7, 2018. Qualis: A2
48.	DASILVA, LUCAS F. ; BECKEDORFF, FELIPE C. ; AYUPE, ANA C. ; AMARAL, MURILO S. ; MESEL, VINÍCIUS ; VIDEIRA, ALEXANDRE ; Reis, Eduardo M. ; REIS, EM ; SETUBAL, JOÃO C. ; VERJOVSKI-ALMEIDA, Sergio. Chromatin Landscape Distinguishes the Genomic Loci of Hundreds of Androgen-Receptor-Associated LincRNAs From the Loci of Non-associated LincRNAs. Frontiers in Genetics. v. 9, p. 1-21, 2018. Qualis: A2
49.	DE AZEVEDO, S. ; GONZÁLEZ, M. F. ; CINTAS, C. ; RAMALLO, V. ; QUINTO-SÁNCHEZ, M. ; MÁRQUEZ, F. ; HÜNEMEIER, T. ; PASCHETTA, C. ; RUDERMAN, A. ; NAVARRO, P. ; PAZOS, B. A. ; SILVA DE CERQUEIRA, C. C. ; VELAN, O. ; RAMÍREZ-ROZZI, F. ; CALVO, N. ; CASTRO, H. G. ; PAZ, R. R. ; GONZÁLEZ-JOSÉ, R.. Reply to Evteev and Heuzé: How to overcome the problem of modeling respiration departing from bony structures. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. v. 00, p. 201804796-000, 2018. Qualis: A1
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52.	DE SOUZA, AMANDA P. ; Grandis, Adriana ; ARENQUE-MUSA, BRUNA C. ; Buckeridge, Marcos S.. Diurnal variation in gas exchange and nonstructural carbohydrates throughout sugarcane development. FUNCTIONAL PLANT BIOLOGY. v. 1, p. 00-00, 2018. Qualis: A2
53.	DIGIAMPIETRI, LUCIANO ANTONIO ; Ferreira, João Eduardo. Desambiguação de nomes de autores para a identificação automática de perfis acadêmicos. EM QUESTÃO. v. 24, p. 37, 2018. Qualis: A3
54.	DODEN, H. ; SALLAM, L. A. ; DEVENDRAN, S. ; LY, L. ; DODEN, G. ; DANIEL, S. L. ; ALVES, JOÃO M.P. ; RIDLON, J. M.. Metabolism of oxo-bile acids and characterization of recombinant 12α-hydroxysteroid dehydrogenases from bile acid 7α-dehydroxylating human gut bacteria ATCC 35704, DSM 15053 and DSM 13275. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. v. 4, p. AEM.00235-18, 2018. Qualis: A1
55.	DOS SANTOS, CLEYDSON BRENO RODRIGUES ; DA SILVA RAMOS, RYAN ; ORTIZ, BRENDA LORENA SÁNCHEZ ; DA SILVA, GABRIEL MONTEIRO ; Giuliatti, Silvana ; BALDERAS-LOPEZ, JOSÉ LUIS ; NAVARRETE, ANDRÉS ; CARVALHO, JOSÉ CARLOS TAVARES. Oil from the fruits of Pterodon emarginatus Vog.: a traditional anti-inflammatory. Study combining in vivo and in silico. JOURNAL OF ETHNOPHARMACOLOGY. v. 222, p. 107-120, 2018. Qualis: A2
56.	DURAN, N. M. ; SPELZINI, D. ; BOERIS, V. ; Barroso da Silva, Fernando Luís. A Combined Experimental and Molecular Simulation Study of Factors Influencing interaction of Quinoa Proteins-Carrageenan. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. v. 107, p. 949-956, 2018. Qualis: A1
57.	FAUSET, SOPHIE ; OLIVEIRA, LAUANA ; BUCKERIDGE, MARCOS ; FOYER, CHRISTINE H. ; GALBRAITH, DAVID ; TIWARI, RAKESH ; GLOOR, MANUEL. Contrasting responses of stomatal conductance and photosynthetic capacity to warming and elevated CO2 in the tropical tree species Alchornea glandulosa under heatwave conditions. ENVIRONMENTAL AND EXPERIMENTAL BOTANY. v. 158, p. 28-39, 2018. Qualis: A1
58.	FERRAZ, T. ; ROSSONI, D. M. ; ALTHOFF, S. L. ; PISSINATTI, A. ; PAIXAO-CORTES, V. R. ; BORTOLINI, M. C. ; GONZALEZ-JOSE, R. ; MARROIG, G. ; SALZANO, F. M. ; GONCALVES, G. L. ; HÜNEMEIER, T.. Contrasting patterns of RUNX2 repeat variations are associated with palate shape in phyllostomid bats and New World primates. Scientific Reports. v. 8, p. 000-000, 2018. Qualis: A2
59.	FERREIRA, GUSTAVO RODRIGUES ; Nakaya, Helder Imoto ; COSTA, LUCIANO DA FONTOURA. Gene regulatory and signaling networks exhibit distinct topological distributions of motifs. PHYSICAL REVIEW E. v. 97, p. 1, 2018. Qualis: A1 (PHYSICAL REVIEW X)
60.	Ferreira, Joao Eduardo; ANTONIO VISINTIN, JOSE ; OKAMOTO, JUN ; CESAR BERNARDES, MAURO ; PATERLINI, ADRIANO ; ROQUE, ALEXANDER CSOKA ; RAMALHO MIGUEL, MOISES. Integrating the University of São Paulo Security Mobile App to the Electronic Monitoring System. Em: 2018 IEEE International Conference on Big Data (Big Data), p. 1377, 2018. Qualis: Não identificado (2018 IEEE International Conference on Big Data (Big Data))
61.	Ferreira, João Eduardo; Spanoudakis, George (Org.) ; Ma, Yutao (Org.) ; Zhang, Liang-Jie (Org.). Lecture Notes in Computer Science. 1 ed. Switzerland: Springer International Publishing, 2018. v. 10969, p. 192.
62.	FINK, GÜNTHER ; ANDREWS, KATHRYN G ; BRENTANI, HELENA ; GRISI, SANDRA ; SCOLEZE FERRER, ANA PAULA ; BRENTANI, ALEXANDRA. Overall and Sex-specific Associations between Fetal Adversity and Child Development at One Year: Evidence from Brazil. AMERICAN JOURNAL OF EPIDEMIOLOGY. v. 187, p. 2324-2331, 2018. Qualis: A1
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66.	GIRARDI, EDUARDO A. ; BRANDÃO, ANDRÉA D. ; COELHO, RUBENS D. ; DO COUTO, HILTON T. Z. ; Buckeridge, Marcos S. ; MOURÃO FILHO, FRANCISCO DE ASSIS A.. Regulated deficit irrigation benefits the production of container-grown citrus nursery trees. TREES-STRUCTURE AND FUNCTION. v. 32, p. 1751-1766, 2018. Qualis: Não identificado (TREES-STRUCTURE AND FUNCTION)
67.	GIRARDI, EDUARDO AUGUSTO ; BRANDÃO, ANDRÉA DIAS ; COELHO, RUBENS DUARTE ; COUTO, HILTON THADEU ZARATE DO ; BUCKERIDGE, MARCOS SILVEIRA ; MOURÃO FILHO, FRANCISCO DE ASSIS ALVES. Polyethylene glycol damages grafted citrus plants based on biometric, physiological,and biochemical responses. REVISTA BRASILEIRA DE FRUTICULTURA (ONLINE). v. 40, p. E071-E071, 2018. Qualis: B1
68.	Gobber, Charles ; ALVES, WONDER A. L. ; HASHIMOTO, RONALDO F.. Ultimate Leveling Based on Mumford-Shah Energy Functional Applied to Plant Detection. Em: Mendoza M., Velastín S.. (Org.). Lecture Notes in Computer Science. 1ed. : Springer International Publishing. 2018.v. 10657, p. 220-228.
69.	GOLDEMBERG, JOSÉ ; SOUZA, GLAUCIA MENDES ; MACIEL-FILHO, RUBENS ; CANTARELLA, HEITOR. Scaling up biofuels? A critical look at expectations performance and governance. ENERGY POLICY. v. 118, p. 655-657, 2018. Qualis: A1
70.	GUIMARÃES, A. M. S. Palestra 'Projeto Rondon e Biocientista Mirim'. Local: Departamento de Imunologia, ICB, USP. 2018. Apresentação de Trabalho/Conferência ou palestra
71.	GUIMARÃES, A. M. S. Palestra 'Caracterização molecular de micro-organismos'. Local: Unicamp, Campinas. 2018. Apresentação de Trabalho/Conferência ou palestra
72.	GUIMARÃES, A. M. S. Paletra 'Compartilhamento de experiência em atividades de educação em saúde'. Local: FMVZ, USP. 2018. Apresentação de Trabalho/Conferência ou palestra
73.	GUIMARÃES, A. M. S. Palestra ' Adaptabilidade hospedeira do Complexo Mycobacterium tuberculosis'. Local: Departamento de Imunologia, ICB, USP. 2018. Apresentação de Trabalho/Conferência ou palestra
74.	GUIMARÃES, A. M. S. Palestra 'Projetos de extensão no ICB, USP - Rondon e Biocientista Mirim'. 2018. Apresentação de Trabalho/Conferência ou palestra
75.	GUIMARÃES, A. M. S. Palestra 'Projeto Rondon e Biocientista Mirim'. Local: CTA, ICB, USP. 2018. Apresentação de Trabalho/Conferência ou palestra
76.	GUIMARÃES, A. M. S.; FURLAN, R. ; BUSSAB, G. L.. Biocientista Mirim: da Universidade à Escola, estimulando o pensamento crítico científico. Em: IV Congresso da Graduaçào da Universidade de São Paulo, 2018, São Paulo. IV Congresso da Graduaçào da Universidade de São Paulo, v. 1, p. 1, 2018.
77.	GUIMARÃES, LILIAN O. ; FERNANDES, FRANCISCO ; MONTEIRO, ELIANA F. ; CURADO, IZILDA ; HOLCMAN, MARCIA M. ; WUNDERLICH, GERHARD ; SANTOS, SIDNEY E. ; SOLER, JÚLIA M. ; KIRCHGATTER, KARIN. Influence of polymorphisms in toll-like receptors (TLRs) on malaria susceptibility in low-endemic area of the Atlantic Forest, São Paulo, Brazil. ACTA TROPICA. v. 182, p. 309-316, 2018. Qualis: A1
78.	GUZMAN, G. E. C. ; VIDAL, M. C. ; SATO, J. R. ; FUJITA, A. Identification of alterations associated with age in the clustering structure of functional brain networks. PLoS One. v. 13, p. e0195906, 2018. Qualis: A1
79.	HARRIS, SPENCER C. ; DEVENDRAN, SARAVANAN ; ALVES, JOÃO M.P. ; MYTHEN, SEAN M. ; HYLEMON, PHILLIP B. ; RIDLON, JASON M.. Identification of a gene encoding a flavoprotein involved in bile acid metabolism by the human gut bacterium Clostridium scindens ATCC 35704. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS. v. 1863, p. 276-283, 2018. Qualis: A2 (BIOCHIMICA AND BIOPHYSICA ACTA. MOLECULAR AND CELL BIOLOGY OF LIPIDS)
80.	HIRAKO, ISABELLA CRISTINA ; ASSIS, PATRÍCIA APARECIDA ; HOJO-SOUZA, NATÁLIA SATCHIKO ; REED, GEORGE ; NAKAYA, HELDER ; GOLENBOCK, DOUGLAS TAYLOR ; COIMBRA, RONEY SANTOS ; GAZZINELLI, RICARDO TOSTES. Daily Rhythms of TNFα Expression and Food Intake Regulate Synchrony of Plasmodium Stages with the Host Circadian Cycle. Cell Host & Microbe. v. 1, p. 1, 2018. Qualis: A1
81.	HUTTNER, ANGELA ; AGNANDJI, SELIDJI TODAGBE ; COMBESCURE, CHRISTOPHE ; FERNANDES, JOSÉ F ; BACHE, EMMANUEL BACHE ; KABWENDE, LUMEKA ; NDUNGU, FRANCIS MAINA ; BROSNAHAN, JESSICA ; MONATH, THOMAS P ; LEMAÎTRE, BARBARA ; GRILLET, STÉPHANE ; BOTTO, MIRIAM ; ENGLER, OLIVIER ; PORTMANN, JASMINE ; SIEGRIST, DENISE ; BEJON, PHILIP ; SILVERA, PETER ; KREMSNER, PETER ; SIEGRIST, CLAIRE-ANNE ; NAKAYA, H. I. ; et.al. Determinants of antibody persistence across doses and continents after single-dose rVSV-ZEBOV vaccination for Ebola virus disease: an observational cohort study. LANCET INFECTIOUS DISEASES. v. 18, p. 738-748, 2018. Qualis: A1 (LANCET. INFECTIOUS DISEASES)
82.	JACOVAS, VANESSA C. ; COUTO-SILVA, CAINÃ M. ; NUNES, KELLY ; LEMES, RENAN B. ; DE OLIVEIRA, MARCELO Z. ; Salzano, Francisco M. ; Bortolini, Maria Cátira ; Hünemeier, Tábita. Selection scan reveals three new loci related to high altitude adaptation in Native Andeans. Scientific Reports. v. 8, p. 000-000, 2018. Qualis: A2
83.	JOCHEMS, SIMON P. ; MARCON, FERNANDO ; CARNIEL, BEATRIZ F. ; HOLLOWAY, MARK ; MITSI, ELENA ; SMITH, EMMA ; GRITZFELD, JENNA F. ; SOLÓRZANO, CARLA ; REINÉ, JESÚS ; POJAR, SHERIN ; NIKOLAOU, ELISSAVET ; GERMAN, ESTHER L. ; HYDER-WRIGHT, ANGIE ; HILL, HELEN ; HALES, CAZ ; DE STEENHUIJSEN PITERS, WOUTER A. A. ; BOGAERT, DEBBY ; ADLER, HUGH ; ZAIDI, SEHER ; NAKAYA, H. I. ; et.al. Inflammation induced by influenza virus impairs human innate immune control of pneumococcus. NATURE IMMUNOLOGY. v. 1, p. 1, 2018. Qualis: A1
84.	KOIDE, T. Internal RNAs overlapping coding sequences can drive the production of alternative proteins in prokaryotes. 2018. Apresentação de Trabalho/Conferência ou palestra
85.	KOIDE, T. Internal RNAs overlapping coding sequences can drive the production of alternative proteins in prokaryotes. 2018. Apresentação de Trabalho/Conferência ou palestra
86.	LEADEN, LAURA ; SILVA, LARISSA G. ; RIBEIRO, RODOLFO A. ; DOS SANTOS, NAARA M. ; LORENZETTI, ALAN P. R. ; ALEGRIA, THIAGO G. P. ; SCHULZ, MARIANE L. ; MEDEIROS, MARISA H. G. ; Koide, Tie ; MARQUES, MARILIS V.. Iron Deficiency Generates Oxidative Stress and Activation of the SOS Response in Caulobacter crescentus. Frontiers in Microbiology. v. 9, p. 1, 2018. Qualis: A1
87.	LEVER, MELISSA ; Hirata, Thiago C. ; RUSSO, PEDRO S. T. ; Nakaya, Helder I.. Systems Immunology. Computational Biology. 1ed. Em: . : Springer International Publishing. 2018.p. 159-173.
88.	LEWIN, HARRIS A. ; ROBINSON, GENE E. ; KRESS, W. JOHN ; BAKER, WILLIAM J. ; CODDINGTON, JONATHAN ; CRANDALL, KEITH A. ; DURBIN, RICHARD ; EDWARDS, SCOTT V. ; FOREST, FÉLIX ; GILBERT, M. THOMAS P. ; GOLDSTEIN, MELISSA M. ; GRIGORIEV, IGOR V. ; HACKETT, KEVIN J. ; HAUSSLER, DAVID ; JARVIS, ERICH D. ; JOHNSON, WARREN E. ; PATRINOS, ARISTIDES ; RICHARDS, STEPHEN ; CASTILLA-RUBIO, JUAN CARLOS ; Van Sluys, Marie-Anne ; et.al. Earth BioGenome Project: Sequencing life for the future of life. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. v. 115, p. 4325-4333, 2018. Qualis: A1
89.	LIMA, R. A. ; PU, C. ; TAKECIAN, P. L. ; KAMAURA, L. T. ; PADILHA, BRUNO ; FERREIRA, J.E.. Modeling Time-Critical Processes with WED-flow. 2018. Apresentação de Trabalho/Conferência ou palestra
90.	LIMA, R. A. ; Pu, Calton ; TAKECIAN, P. L. ; KAMAURA, L. T. ; FERREIRA, J. E.. Modeling Time-Critical Processes with WED-Flow. Em: International Conference on Web Services, v. 10966, p. 34-48, 2018.Qualis: Não identificado (International Conference on Web Services)
91.	LOBBA, A. R. M. ; CARREIRA, A. C. O. ; CERQUEIRA, O. L. D. ; FUJITA, A ; DEOCESANO-PEREIRA, C. ; OSORIO, C. A. B. ; SOARES, F. A. ; RAMESHWAR, P. ; SOGAYAR, M. C.. High CD90 (THY-1) expression positively correlates with cell transformation and worse prognosis in basal-like breast cancer tumors. PLoS One. v. 13, p. e0199254, 2018. Qualis: A1
92.	LOCOSSELLI, G. M. ; CHACÓN-MADRID, KATHERINE ; ZEZZI ARRUDA, MARCO AURELIO ; PEREIRA DE CAMARGO, EVELYN ; LOPES MOREIRA, TIANA CARLA ; SALDIVA DE ANDRÉ, CARMEN DIVA ; AFONSO DE ANDRÉ, PAULO ; SINGER, JULIO M. ; NASCIMENTO SALDIVA, PAULO HILÁRIO ; BUCKERIDGE, M. S.. Tree rings reveal the reduction of Cd, Cu, Ni and Pb pollution in the central region of São Paulo, Brazil. ENVIRONMENTAL POLLUTION. v. 242, p. 320-328, 2018. Qualis: B4
93.	MACHICAO, JEANETH ; FILHO, HUMBERTO A. ; LAHR, DANIEL J. G. ; BUCKERIDGE, MARCOS ; BRUNO, ODEMIR M.. Topological assessment of metabolic networks reveals evolutionary information. Scientific Reports. v. 8, p. 15918, 2018. Qualis: A2
94.	Maltez Thomas, Andrew ; Prata Lima, Felipe ; Maria Silva Moura, Livia ; Maria da Silva, Aline ; DIAS-NETO, Emmanuel ; SETUBAL, JOÃO C.. Comparative Metagenomics. Em: Joao C Setubal; Jens Stoye; Peter F. Stadler. (Org.). Methods in Molecular Biology. 1ed.New York. : Springer New York. 2018.p. 243-260.
95.	Maltez Thomas, Andrew ; Prata Lima, Felipe ; Maria Silva Moura, Livia ; Maria da Silva, Aline ; DIAS-NETO, Emmanuel ; Setubal, João C.. Comparative Metagenomics. Methods in Molecular Biology. 1ed. Em: . : Springer New York. 2018.p. 243-260.
96.	Marcovitch, Jacques ; Goldemberg, José ; Axel-Berg, Justin ; Righetti, Sabine ; Santos, Solange Maria dos ; Oliveira, Luiz Nunes de ; Grácio, Maria Cláudia Cabrini ; Rosas, Fábio Sampaio ; Ranieri, Nina ; Pedrosa, Renato ; Pereira, Micael Waldhelm ; Cruz, Carlos Henrique de Brito ; Shimizu, Karen ; Ferreira, João Eduardo ; Machado, Raul ; Segurado, Aluisio Cotrim ; Beppu, Marisa Masumi ; Holland, Helber ; Guimarães, José Augusto Chaves. Repensar a universidade: desempenho acadêmico e comparações internacionais. 1a ed. Universidade de São Paulo. Escola de Comunicações e Artes, 2018. .
97.	MEDINA-RODRIGUEZ, ROSARIO ; CASTANON, CESAR BELTRAN ; HASHIMOTO, RONALDO FUMIO. Evaluation of the Impact of Initial Positions obtained by Clustering Algorithms on the Straight Line Segments Classifier. Em: 2018 IEEE Latin American Conference on Computational Intelligence (LACCI), p. 1, 2018. Qualis: Não identificado (2018 IEEE Latin American Conference on Computational Intelligence (LACCI))
98.	MORENO, NATÁLIA CESTARI ; GARCIA, CAMILA CARRIÃO MACHADO ; MUNFORD, VERIDIANA ; ROCHA, CLARISSA RIBEIRO REILY ; PELEGRINI, ALESSANDRA LUIZA ; CORRADI, CAMILA ; Sarasin, Alain ; Menck, Carlos Frederico Martins. The key role of UVA-light induced oxidative stress in human Xeroderma Pigmentosum Variant cells. FREE RADICAL BIOLOGY AND MEDICINE. v. 131, p. 432-442, 2018. Qualis: A1 (FREE RADICAL BIOLOGY & MEDICINE)
99.	MORENO, NATÁLIA CESTARI ; GARCIA, CAMILA CARRIÃO MACHADO ; ROCHA, CLARISSA RIBEIRO REILY ; MUNFORD, VERIDIANA ; Menck, Carlos Frederico Martins. ATR/Chk1 pathway is activated by oxidative stress in response to UVA light in human Xeroderma Pigmentosum Variant cells. PHOTOCHEMISTRY AND PHOTOBIOLOGY. v. 95, p. 1-10, 2018. Qualis: A4
100.	NAKAYA, H. I. (Singapore Immunology Network @ Cingapura) Systems Immunology Tools for Non-Bioinformaticians. 2018. Apresentação de Trabalho/Seminário
101.	NAKAYA, H. I. Curso de Verão em Bioinformática USP 2018 - palestra 'Perspectivas em Bioinformática'. 2018. Apresentação de Trabalho/Simpósio
102.	NAKAYA, H. I. (Medical Research Council Unit @ Gambia) Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
103.	NAKAYA, H. I. Palestra sobre Internacionalização da FCF. 2018. Apresentação de Trabalho/Conferência ou palestra
104.	NAKAYA, HELDER. São Paulo School For Advanced Science In Cell Biology. 2018. Apresentação de Trabalho/Simpósio
105.	NAKAYA, HELDER. (VSV-EBOPLUS Annual Meeting@Genova, Italia) Palestra: Scientific Advisory Board Feedback. 2018. Apresentação de Trabalho/Seminário
106.	NAKAYA, HELDER. (Seminário na UFRJ@ RJ) Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
107.	NAKAYA, HELDER. (Ribeirão Preto @ USP) 10th Summer School on Medicines. 2018. Apresentação de Trabalho/Simpósio
108.	NAKAYA, HELDER. (SP @ FACIS) Cultura vs Genes: O que determina nosso comportamento?. 2018. Apresentação de Trabalho/Simpósio
109.	NAKAYA, HELDER. (BH @ UFMG) Palestra de abertura do 50 anos da pós-graduação em Bioquímica e Imunologia. 2018. Apresentação de Trabalho/Seminário
110.	NAKAYA, HELDER. (Instituto Butantan @ CENTD) Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
111.	NAKAYA, HELDER. (Manaus @ FMT) Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
112.	NAKAYA, HELDER. (Curitiba @ FioCruz) Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
113.	NAKAYA, HELDER. (I Simpósio Cearense de Imunologia @ Fortaleza) Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
114.	NAKAYA, HELDER. (2º Congresso Latino Americano de Toxicologia Clínica e Laboratorial @ Porto Alegre) Palestrante convidado. 2018. Apresentação de Trabalho/Simpósio
115.	NAKAYA, HELDER. (Workshop Tools and Platforms for Phenotypic Drug Discovery @ USP) Palestrante convidado. 2018. Apresentação de Trabalho/Simpósio
116.	NAKAYA, HELDER. (Descoberta de novos virus @ USP) Palestrante convidado. 2018. Apresentação de Trabalho/Simpósio
117.	Nakaya, Helder I. (FESBE @ Campos do Jordão) XXXIII Reunião anual. Palestra: Analyzing arboviruses molecular mechanisms through the systems biology. 2018. Apresentação de Trabalho/Congresso
118.	Nakaya, Helder I. (MEDTROP @ Recife) 54o Congresso da SOCIEDADE BRASILEIRA DE MEDICINA TROPICAL. Palestrante convidado. 2018. Apresentação de Trabalho/Congresso
119.	Nakaya, Helder I. (INCTV @ Santos) Palestra no encontro anual do INCT de Vacinas. Palestrante convidado. 2018. Apresentação de Trabalho/Simpósio
120.	Nakaya, Helder I. (ESPCA @ Santos) Seminário na Sao Paulo School of Advanced Sciences on Vaccines, Santos. Palestrante convidado. 2018. Apresentação de Trabalho/Outra
121.	Nakaya, Helder I. (XX RCA @ SP) Palestra no XX Reunião Anual do Butantan. 2018. Apresentação de Trabalho/Simpósio
122.	Nakaya, Helder I. (Córdoba @ Argentina) The Advanced Course on Mucosal Immunology (ACMI 2018). Palestrante convidado. 2018. Apresentação de Trabalho/Simpósio
123.	Nakaya, Helder I. (Freiburg @ Alemanha) Seminário no Kolloquium 2018 Immunity and Infection. Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
124.	Nakaya, Helder I. (43nd Congress of the Brazilian Society of Immunology (SBI) @ Ouro Preto) Palestrante convidado. 2018. Apresentação de Trabalho/Congresso
125.	Nakaya, Helder I. (ICB @ USP) Seminários Gerais do Depto de Fisiologia e Biofísica do ICB/USP. Palestrante convidado. 2018. Apresentação de Trabalho/Seminário
126.	Nakaya, Helder I. (UFABC @ Sao Bernardo) Palestra na série de Seminários em Cognição com o título: Biologia Integrativa Aplicada à Saúde Humana. 2018. Apresentação de Trabalho/Seminário
127.	NARDELLI, TARLLIZA ROMANNA ; VANZELA, EMERIELLE CRISTINA ; BENEDICTO, KELI CRISTINA ; BROZZI, FLORA ; Fujita, André ; CARDOZO, ALESSANDRA K. ; EIZIRIK, DÉCIO ; BOSCHERO, ANTONIO CARLOS ; ORTIS, FERNANDA. Prolactin protects against cytokine-induced beta cell death by NFkB and JNK inhibition. JOURNAL OF MOLECULAR ENDOCRINOLOGY. v. 61, p. JME-16-0257-36, 2018. Qualis: A2
128.	NASCIMENTO, C. ; VILLELA, P. N. ; OLIVEIRA, K. C. ; KIM, H. K. ; MORETTO, A. C. ; LEITE, R. E. P. ; FERRETTI-REBUSTINI, R. E. L. ; GRINBERG, L. T. ; SUEMOTO, C. K. ; FARFEL, J. M. ; PASQUALUCCI, C. A. ; BRENTANI, H. P. ; NITRINI, R. ; JACOB FILHO, W. ; LAFER, B.. Transactive response DNA-binding protein 43 as a neuromarker of bipolar disorder. Em: 20th Annual Conference of the International Society for Bipolar Disorders, 2018, Mexico. Mexico. Bipolar Disorders, v. 20, p. 122-123, 2018.
129.	NASCIMENTO, N. C. ; GUIMARÃES, A. M. S. ; SANTOS, A. P. ; CHU, Y. ; Marques, L.M. ; MESSICK, J. B.. RNA-Seq based transcriptome of whole blood from immunocompetent pigs (Sus scrofa) experimentally infected with Mycoplasma suis strain Illinois. VETERINARY RESEARCH. v. 49, p. 49, 2018.Qualis: A1
130.	NUNES, PAULA VILLELA ; NASCIMENTO, CAMILA FERNANDES ; KIM, HELENA KYUNGHEE ; ANDREAZZA, ANA CRISTINA ; Brentani, Helena Paula ; SUEMOTO, CLAUDIA KIMIE ; LEITE, RENATA ELAINE PARAIZO ; FERRETTI-REBUSTINI, RENATA ELOAH DE LUCENA ; PASQUALUCCI, CARLOS AUGUSTO ; NITRINI, RICARDO ; GRINBERG, LEA TENENHOLZ ; YOUNG, LIONEL TREVOR ; JACOB-FILHO, WILSON ; LAFER, BENY. Low brain-derived neurotrophic factor levels in post-mortem brains of older adults with depression and dementia in a large clinicopathological sample.. JOURNAL OF AFFECTIVE DISORDERS. v. 241, p. 176-181, 2018. Qualis: A1
131.	PADILHA, BRUNO ; ROBERTO, R. L. ; SCHWERZ, A. L. ; PU, C. ; FERREIRA, J. E.. WED-SQL: an intermediate declarative language for PAIS execution. Em: International Conference on Web Services, v. 10966, p. 407-421, 2018.Qualis: Não identificado (International Conference on Web Services)
132.	PADOVANI DE SOUZA, KLEBER ; SETUBAL, JOÃO CARLOS ; PONCE DE LEON F. DE CARVALHO, ANDRÉ CARLOS ; OLIVEIRA, GUILHERME ; CHATEAU, ANNIE ; ALVES, RONNIE. Machine learning meets genome assembly. BRIEFINGS IN BIOINFORMATICS. v. 72, p. 1, 2018. Qualis: A1
133.	PAGLIUSO, DÉBORA ; GRANDIS, ADRIANA ; IGARASHI, EGLEE S. ; LAM, ERIC ; Buckeridge, Marcos S.. Correlation of Apiose Levels and Growth Rates in Duckweeds. Frontiers in Chemistry. v. 6, p. 291, 2018. Qualis: A2
134.	PAQUOLA, APUÃ C. M. ; ASIF, HUMA ; PEREIRA, CARLOS ALBERTO DE BRAGANÇA ; FELTES, BRUNO CÉSAR ; BONATTO, DIEGO ; Lima, Wanessa Cristina ; Menck, Carlos Frederico Martins. Horizontal Gene Transfer Building Prokaryote Genomes: Genes Related to Exchange Between Cell and Environment are Frequently Transferred. JOURNAL OF MOLECULAR EVOLUTION. v. 86, p. 190-203, 2018. Qualis: A3
135.	Patané, José S. L. ; MARTINS, JOAQUIM ; Setubal, João C.. Phylogenomics. Methods in Molecular Biology. 1ed. Em: . : Springer New York. 2018.p. 103-187.
136.	PATRIOTA, A. G. ; VIDAL, M. C. ; JESUS, D. A. C. ; FUJITA, A. ANOCVA: a non-parametric statistical test to compare clustering structures. Em: Fabricio Alves Barbosa da Silva; Nicolas Carels; Floriano Paes Silva Junior. (Org.). Theoretical and Applied Aspects of Systems Biology. 1ed. : Springer International Publishing. 2018.v. 27, p. 1.
137.	PEREIRA, ADRIANA S. A. ; AMARAL, MURILO S. ; VASCONCELOS, ELTON J. R. ; PIRES, DAVID S. ; ASIF, HUMA ; DASILVA, LUCAS F. ; MORALES-VICENTE, DAVID A. ; CARNEIRO, VITOR C. ; ANGELI, CLAUDIA B. ; PALMISANO, GIUSEPPE ; FANTAPPIE, MARCELO R. ; PIERCE, RAYMOND J. ; Setubal, João C. ; VERJOVSKI-ALMEIDA, Sergio. Inhibition of histone methyltransferase EZH2 in Schistosoma mansoni in vitro by GSK343 reduces egg laying and decreases the expression of genes implicated in DNA replication and noncoding RNA metabolism. PLoS Neglected Tropical Diseases. v. 12, p. e0006873, 2018. Qualis: A1
138.	PERES, RAPHAEL S. ; DONATE, PAULA B. ; TALBOT, JHIMMY ; CECILIO, NERRY T. ; LOBO, PATRICIA R. ; MACHADO, CAIO C. ; LIMA, KALIL W.A. ; OLIVEIRA, RENE D. ; CARREGARO, VANESSA ; Nakaya, Helder I. ; CUNHA, THIAGO M. ; ALVES-FILHO, JOSÉ CARLOS ; LIEW, FOO Y. ; LOUZADA-JUNIOR, PAULO ; CUNHA, FERNANDO Q.. TGF-β signalling defect is linked to low CD39 expression on regulatory T cells and methotrexate resistance in rheumatoid arthritis. JOURNAL OF AUTOIMMUNITY. v. 1, p. 1, 2018. Qualis: A1
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143.	RAMADAN, EMAN ; MAGED, MOHAMAD ; EL HOSSEINY, AHMED ; CHAMBERGO, FELIPE S. ; Setubal, João C. ; EL DORRY, HAMZA. Molecular adaptations of bacterial mercuric reductase to the hypersaline Kebrit Deep in the Red Sea. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. v. 85, p. e01431, 2018. Qualis: A1
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146.	RUSSO, PEDRO S. T. ; FERREIRA, GUSTAVO R. ; CARDOZO, LUCAS E. ; BÜRGER, MATHEUS C. ; ARIAS-CARRASCO, RAUL ; MARUYAMA, SANDRA R. ; HIRATA, THIAGO D. C. ; LIMA, DIÓGENES S. ; PASSOS, FERNANDO M. ; FUKUTANI, KIYOSHI F. ; LEVER, MELISSA ; SILVA, JOÃO S. ; MARACAJA-COUTINHO, VINICIUS ; Nakaya, Helder I.. CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses. BMC BIOINFORMATICS. v. 19, p. 1, 2018. Qualis: A1
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148.	Sarasin, Alain ; Menck, Carlos F.M. ; Cabral-Neto, Januario B.. Xeroderma Pigmentosum: When the Sun Is the Enemy. Em: P Boffeta and P Hainault. (Org.). Reference Module in Biomedical Sciences. 1ed. : Elsevier. 2018.v. 3, p. 562-571.
149.	SATO, F. P. ; BRENTANI. HP ; MERCADANTE, M. T.. Transtornos do Espectro Autista. Em: Forlenza OV, Miguel EC. (Org.). Clínica Psiquiátrica de bolso. 2ªed.Barueri. : Manole. 2018.p. 154-174.
150.	Sato, Joao Ricardo ; VIDAL, MACIEL ; DE SIQUEIRA SANTOS, SUZANA ; MASSIRER, Katlin Brauer ; Fujita, Andre. Complex network measures in Autism Spectrum Disorders. IEEE-ACM Transactions on Computational Biology and Bioinformatics. v. 15, p. 1-1, 2018. Qualis: A1 (IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS)
151.	SCHWERZ, ANDRE LUIS ; LIBERATO, RAFAEL ; Pu, Calton ; Ferreira, Joao Eduardo. Robust and Reliable Process-Aware Information Systems. IEEE Transactions on Services Computing. v. 1, p. 1-1, 2018. Qualis: A1
152.	Setubal, João C. A microbial-molecular view of what happens when organic waste from a Zoo is composted. 2018. Apresentação de Trabalho/Conferência ou palestra
153.	Setubal, João C.; Almeida, Nalvo F. ; WATTAM, ALICE R.. Comparative Genomics for Prokaryotes. Methods in Molecular Biology. 1ed. Em: . : Springer New York. 2018.p. 55-78.
154.	Setubal, João C.; Stadler, Peter F.. Gene Phylogenies and Orthologous Groups. Methods in Molecular Biology. 1ed. Em: . : Springer New York. 2018.p. 1-28.
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156.	SILVA, FLB; Derreumaux, P. ; PASQUALI, SAMUELA. Protein-RNA complexation driven by the charge regulation mechanism. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. v. 498, p. 264-273, 2018. Qualis: A3
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159.	SOUZA, G. M. ; NETTO, P. E. A. ; VERDADE, LUCIANO M. ; BALLESTER, MARIA VICTORIA R. ; CANTARELLA, HEITOR ; JOHNSON, FRANCIS X. ; CIANNELLA, R. ; BECKERS, T. ; BONOMI, A. ; BOROTO, R. ; CRUZ, C. H. B. ; BUCKERIDGE, M. S. ; CHUM, HELENA ; CORTEZ, L. A. B. ; MAIA, R. ; DIAZ-CHAVEZ, ROCIO ; GOLDEMBERG, JOSÉ ; HILBERT, JORGE A. ; NOGUEIRA, L. A. H. ; KAFAROV, V. ; et.al. Sustainable Bioenergy: Latin America and Africa.. SCOPE. v. 1, p. 1, 2018.Qualis: Não identificado (SCOPE)
160.	SOUZA, GM. Sugarcane Genome Sequencing Initiative. 2018. Apresentação de Trabalho/Conferência ou palestra
161.	SOUZA, GM. Sugarcane Genome Sequencing Initiative. 2018. Apresentação de Trabalho/Conferência ou palestra
162.	SOUZA, GM. Conference Green Rio 2018. 2018. Apresentação de Trabalho/Conferência ou palestra
163.	SOUZA, GM. Biotecnologia para o desenvolvimento sustentável. 2018. Apresentação de Trabalho/Conferência ou palestra
164.	SOUZA, GM. Bioenergy & Sustainability: Latin America and Africa. 2018. Apresentação de Trabalho/Conferência ou palestra
165.	SOUZA, GM. Bioenergy & Sustainability: Latin America and Africa. 2018. Apresentação de Trabalho/Conferência ou palestra
166.	SOUZA, GM. Bioenergy & Sustainability: Latin America and Africa. 2018. Apresentação de Trabalho/Conferência ou palestra
167.	SOUZA, GM. Bioenergy & Sustainability: Latin America and Africa. 2018. Apresentação de Trabalho/Conferência ou palestra
168.	SOUZA, GM. Biofuture Plataform e Conferência ABLC. 2018. Apresentação de Trabalho/Outra
169.	SOUZA, GM. Fostering Sustainable Feedstock Production for Advanced Biofuels on underutilised land. 2018. Apresentação de Trabalho/Outra
170.	SPECK-HERNANDEZ, C. A. ; ASSIS, A. F. ; FELICIO, R. F. ; COTRIM-SOUSA, L. ; PEZZI, N. ; LOPES, G. S. ; BOMBONATO-PRADO, K. F. ; Giuliatti, S ; PASSOS, G. A.. Aire Disruption Influences the Medullary Thymic Epithelial Cell Transcriptome and Interaction With Thymocytes. Frontiers in Immunology. v. 9, p. 964, 2018. Qualis: A1
171.	STUMP, G. V. ; BIASAO, M. C. R. ; SATO, F. ; MORAES, R. M. C. B. ; BRENTANI, H. P.. Espectro Autista. Em: Sandra J.F.E. Grisi; Ana Maria U. Escobar; Filumena M.S.Gomes. (Org.). Desenvolvimento da Criança. 1ªed.São Paulo / São Paulo. : Atheneu. 2018.p. 83-93.
172.	TAMAROZZI, E. R. ; Silvana Giuliatti. Understanding the Role of Intrinsic Disorder of Viral Proteins in the Oncogenicity of Different Types of HPV. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. v. 19, p. 198-15, 2018. Qualis: A2
173.	TAMAYO, MARIOLY VERNHES ; SCHUCH, A.P. ; Yagura, Teiti ; GIL, LUIS BALY ; MENCK CF ; SÁNCHEZ-LAMAR, ANGEL. Genoprotective Effect of Extract Against UVA, UVB, and Solar Radiation. PHOTOCHEMISTRY AND PHOTOBIOLOGY. v. 94, p. 1026-1031, 2018. Qualis: A4
174.	TAVARES, E. Q. P. ; GRANDIS, A. ; LEMBKE, C. G. ; SOUZA, G. M. ; PURGATTO, E. ; DE SOUZA, A. P. ; BUCKERIDGE, M. S.. Roles of auxin and ethylene in aerenchyma formation in sugarcane roots. PLANT SIGNALLING & BEHAVIOR (ONLINE). v. 13, p. e1422464, 2018. Qualis: A3 (PLANT SIGNALING & BEHAVIOR)
175.	TEIXEIRA, RAPHAEL D. ; GUZZO, CRISTIANE R ; ARÉVALO, SANTIAGO JUSTO ; ANDRADE, MAXUEL O. ; ABRAHÃO, JOSIELLE ; De Souza, Robson F ; FARAH, CHUCK S.. A bipartite periplasmic receptor-diguanylate cyclase pair (XAC2383-XAC2382) in the bacterium Xanthomonas citri. Journal of Biological Chemistry (Online). v. 293, p. jbc.RA118.0034-10781, 2018. Qualis: A1
176.	TEN-CATEN, FELIPE ; VÊNCIO, RICARDO Z. N. ; LORENZETTI, ALAN PÉRICLES R. ; ZARAMELA, LIVIA SOARES ; SANTANA, ANA CAROLINA ; Koide, Tie. Internal RNAs overlapping coding sequences can drive the production of alternative proteins in archaea. RNA Biology. v. 15, p. 1-14, 2018. Qualis: A2
177.	VAN DER HEIJDEN, YURI F. ; ABDULLAH, FAREED ; ANDRADE, BRUNO B. ; ANDREWS, JASON R. ; CHRISTOPHER, DEVASAHAYAM J. ; CRODA, JULIO ; EWING, HEATHER ; HAAS, DAVID W. ; HATHERILL, MARK ; HORSBURGH, C. ROBERT ; MAVE, VIDYA ; Nakaya, Helder I. ; ROLLA, VALERIA ; SRINIVASAN, SUDHA ; SUGIYONO, RETNA INDAH ; UGARTE-GIL, CESAR ; HAMILTON, CAROL. Building capacity for advances in tuberculosis research; proceedings of the third RePORT international meeting. TUBERCULOSIS. v. 113, p. 153-162, 2018. Qualis: A3
178.	VASCONCELOS, ELTON J R ; MESEL, VINÍCIUS C ; DASILVA, LUCAS F ; PIRES, DAVID S ; LAVEZZO, GUILHERME M ; PEREIRA, ADRIANA S A ; AMARAL, MURILO S ; Verjovski-Almeida, Sergio. Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes. Database-The Journal of Biological Databases and Curation. v. 2018, p. bay068, 2018. Qualis: A1 (DATABASE: THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION)
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2017

1.	ACKEN, K. ; SANTISO, E. E. ; Barroso da Silva, Fernando Luís. On the chain length effects on the complexation of a polyelectrolyte with milk proteins. Em: Symposium on Molecular Theory and Modeling, 2017, Raleigh. Symposium on Molecular Theory and Modeling. NCSU: Symposium on Molecular Theory and Modeling, p. 24-24, 2017.
2.	ACKEN, K. ; SANTISO, ERIK ; Barroso da Silva, Fernando L.. Painel: On the Chain Length Effects on the Complexation of a Polyelectrolyte with Milk Proteins. 2017. Apresentação de Trabalho/Simpósio
3.	ALVES, C. C. ; DONADI, E. A. ; GIULIATTI, S. In silico Modeling of the C2H2 Zinc-Finger Domain of the GLI3 Transcription Factor. Em: X-meeting 2017 - 13th International Conference of the AB3C, 2017, São Pedro, SP. Proceedings X-Meeting 2017, v. 1, p. 130-130, 2017.
4.	ALVES, J. M. P. Working Together: Amino Acid Biosynthesis in Endosymbiont-harbouring Trypanosomatidae. The Handbook of Microbial Metabolism of Amino Acids. 1ed.Oxfordshire. Em: . : CABI. 2017.p. 371-383.
5.	ALVES, WONDER A.L. ; HASHIMOTO, RONALDO F. ; MARCOTEGUI, BEATRIZ. Ultimate levelings. COMPUTER VISION AND IMAGE UNDERSTANDING. v. 165, p. 60-74, 2017. Qualis: A2
6.	AMGARTEN, DEYVID ; MARTINS, LAYLA FARAGE ; LOMBARDI, KAREN CRISTINA ; ANTUNES, LUCIANA PRINCIPAL ; DE SOUZA, ANA PAULA SILVA ; NICASTRO, GIANLUCCA GONÇALVES ; KITAJIMA, ELLIOTT WATANABE ; QUAGGIO, RONALDO BENTO ; UPTON, CHRIS ; SETUBAL, JOÃO CARLOS ; DA SILVA, ALINE MARIA. Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages. BMC GENOMICS. v. 18, p. ARTN 346, 2017. Qualis: A2
7.	Amorim, CEG ; NUNES, K. ; MEYER, D. ; COMAS, D. ; BORTOLINI, M. C. ; SALZANO, F. M. ; HÜNEMEIER, T.. Genetic Signature of Natural Selection in First Americans. Proceedings of the National Academy of Sciences of the United States of America. v. 00, p. 000, 2017. Qualis: A1
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21.	Barroso da Silva, Fernando Luís. Painel: Aspectos práticos do uso do Método da ABP na disciplina de Físico-Química de polímeros e sistemas dispersos do Curso de Farmácia-Bioquímica (USP). 2017. Apresentação de Trabalho/Congresso
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108.	MASOTTI, C. ; BRITO, L.A. ; NICA, A.C. ; LUDWIG, K.U. ; NUNES, K. ; SAVASTANO, C.P. ; MALCHER, C. ; FERREIRA, S.G. ; KOBAYASHI, G.S. ; BUENO, D.F. ; ALONSO, N. ; FRANCO, D. ; ROJAS-MARTINEZ, A. ; DOS SANTOS, S.E. ; GALANTE, P.A. ; MEYER, D. ; HÜNEMEIER, T. ; MANGOLD, E. ; DERMITZAKIS, E.T. ; PASSOS-BUENO, M.R. ; et.al. MRPL53 , a New Candidate Gene for Orofacial Clefting, Identified Using an eQTL Approach. JOURNAL OF DENTAL RESEARCH. v. 00, p. 002203451773580-000, 2017. Qualis: A1
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110.	MEIRELES, D.A. ; DOMINGOS, R.M. ; GAIARSA, J.W. ; RAGNONI, E.G. ; BANNITZ-FERNANDES, R. ; DA SILVA NETO, J.F. ; DE SOUZA, R.F. ; NETTO, L.E.S.. Functional and evolutionary characterization of Ohr proteins in eukaryotes reveals many active homologs among pathogenic fungi. Redox Biology. v. 12, p. 600-609, 2017. Qualis: A1
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126.	NAKAYA, H. I. (Museu do Amanhã @ Rio) Palestra convidado: Inovações na Saúde: O que o Brasil tem a ver com isso?. 2017. Apresentação de Trabalho/Conferência ou palestra
127.	NAKAYA, H. I. (Fórum Área Básica @ Ribeirão Preto) Palestrante convidado: Pescando ? ?Pescando ?Pescando Boas Ideias Nesse Mar de Dados de Dados Biológicos. 2017. Apresentação de Trabalho/Simpósio
128.	NAKAYA, H. I. (Nex Biomed - Evento de Inovação @ SP) Palestrante convidado: Renascença farmacológica: avanços e desafios no desenvolvimento de remédios. 2017. Apresentação de Trabalho/Conferência ou palestra
129.	NAKAYA, H. I. (XXXII Reunião Anual da Federação de Sociedades de Biologia Experimental ? FeSBE @ Campos do Jordão) Palestrante convidado. 2017. Apresentação de Trabalho/Congresso
130.	NAKAYA, H. I. (RePORT International Meeting @ RJ) Palestrante convidado. 2017. Apresentação de Trabalho/Simpósio
131.	NAKAYA, H. I. (42nd Congress of the Brazilian Society of Immunology (SBI), Mucosal Immuno 2017 @ Salvador) Palestrante convidado. 2017. Apresentação de Trabalho/Congresso
132.	NAKAYA, H. I. Palestra para o curso de Ciências Moleculares USP. 2017. Apresentação de Trabalho/Seminário
133.	NAKAYA, H. I. (XIX Congresso Farmacêutico de São Paulo @ SP) Palestrante convidado. 2017. Apresentação de Trabalho/Congresso
134.	NAKAYA, H. I. (Flanders Annual Meeting - Immunity for Health @ Bélgica) Keynote speaker. 2017. Apresentação de Trabalho/Simpósio
135.	NAKAYA, H. I. (2 Encontro Científico Internacional do Instituto Evandro Chagas @ Belém) Palestrante convidado. 2017. Apresentação de Trabalho/Simpósio
136.	NAKAYA, H. I. (VII Simpósio do Programa de Pós-Graduação em Biologia Molecular @ UNB) Palestrante convidado. 2017. Apresentação de Trabalho/Simpósio
137.	NAKAYA, H. I. (Seminário no INCA @ RJ) Palestrante convidado. 2017. Apresentação de Trabalho/Seminário
138.	NAKAYA, H. I. (11th International Congress of Pharmaceutical Sciences @ Ribeirão Preto) Palestrante convidado. 2017. Apresentação de Trabalho/Congresso
139.	NAKAYA, H. I. (II JORNADA CIENTÍFICA DA ESCOLA DE CIÊNCIAS EXATAS E DA COMPUTAÇÃO @ PUC Goiânia) Palestrante convidado. 2017. Apresentação de Trabalho/Simpósio
140.	NAKAYA, HELDER I. (Seminar for LSTM @ Liverpool) Palestrante convidado. 2017. Apresentação de Trabalho/Seminário
141.	NAKAYA, HELDER I. (Seminar for Institut de Biologie Moléculaire et Cellulaire @ Strasbourg) Palestrante convidado. 2017. Apresentação de Trabalho/Seminário
142.	NAKAYA, HELDER I. (Seminar for University College London @ London) Palestrante convidado. 2017. Apresentação de Trabalho/Seminário
143.	NAKAYA, HELDER I. (AAAS annual meeting@Boston, EUA) Invited speaker. 2017. Apresentação de Trabalho/Conferência ou palestra
144.	NAKAYA, HELDER I. (VSV-EBOVAC Annual Meeting@Genova, Italia) Palestra: Scientific Advisory Board Feedback. 2017. Apresentação de Trabalho/Simpósio
145.	NAKAYA, HELDER I. UNICAMP@SP Palestra para a posse na Academia Brasileira de Ciências. 2017. Apresentação de Trabalho/Simpósio
146.	NAKAYA, HELDER I. UNICAMP: Seminários do Instituto de Biologia. 2017. Apresentação de Trabalho/Seminário
147.	NAKAYA, HELDER I. (V Seminário Anual Científico e Tecnológico de Bio-Manguinhos@FioCruz-RJ) Palestrante convidado. 2017. Apresentação de Trabalho/Simpósio
148.	NAKAYA, HELDER I. (Universidad de La Frontera@Temuco, Chile) Invited speaker. 2017. Apresentação de Trabalho/Seminário
149.	NAKAYA, HELDER I. (9th IUPAP International Conference on Biological Physics@RJ) Invited speaker. 2017. Apresentação de Trabalho/Conferência ou palestra
150.	NAKAYA, HELDER I. Seminários da Medicina LIM56. 2017. Apresentação de Trabalho/Seminário
151.	Nakaya, Helder I. (2nd BRICS Young Scientist Forum@China) Palestrante convidado. 2017. Apresentação de Trabalho/Congresso
152.	Nakaya, Helder I. (FM @ USP) IUIS-Brazil Advanced course on Vaccines. 2017. Apresentação de Trabalho/Seminário
153.	NASCIMENTO, C. ; KIM, H. K. ; OLIVEIRA, K. ; MORETTO, A. C. ; BRENTANI, H. P. ; ANDREAZZA, A. ; LEITE, R. P. ; FERRETTI-REBUSTINI, R. ; SUEMOTO, C. K. ; PASQUALUCCI, C. A. ; NITRINI, R. ; FARFEL, J. ; JACOB FILHO, W. ; NUNES, P. V. ; LAFER, B.. Increased levels of TDP-43 protein in postmortem brain tissue of bipolar disorder subjects. Em: 19th Annual Conference of the International-Society-for-Bipolar-Disorders, 2017, Washington. Bipolar Disorders, v. 19, p. 126-126, 2017.
154.	NAVARRO, BRUNO V. ; ELBL, PAULA ; DE SOUZA, AMANDA P. ; JARDIM, VINICIUS ; DE OLIVEIRA, LEANDRO F. ; MACEDO, AMANDA F. ; DOS SANTOS, ANDRÉ L. W. ; Buckeridge, Marcos S. ; FLOH, ENY I. S.. Carbohydrate-mediated responses during zygotic and early somatic embryogenesis in the endangered conifer, Araucaria angustifolia. PLoS One. v. 12, p. e0180051, 2017. Qualis: A1
155.	NICASTRO, G. G. ; de Souza, R. F.. Comparative genomics of bacterial toxins associated with the type IV secretion system. 2017. Apresentação de Trabalho/Congresso
156.	OLIVEIRA, ANA-CAROLINA ; GOMES-NETO, JOÃO FRANCISCO ; BARBOSA, CARLOS-HENRIQUE DANTAS ; GRANATO, ALESSANDRA ; REIS, BERNARDO S ; SANTOS, BRUNO MAIA ; FUCS, RITA ; CANTO, FÁBIO B ; Nakaya, Helder I ; NÓBREGA, ALBERTO ; BELLIO, MARIA. Crucial role for T cell-intrinsic IL-18R-MyD88 signaling in cognate immune response to intracellular parasite infection. eLife. v. 6, p. 1, 2017. Qualis: A1
157.	OLIVEIRA, ROSÂNGELA C. ; Yamaguti, Maurício ; MARQUES, LUCAS M. ; Buzinhani, Melissa ; RIZZO, HUBER ; MEIRA-JUNIOR, ENOCH BRANDÃO DE SOUZA ; GUIMARÃES, ANA MÁRCIA S. ; GREGORY, LILIAN ; Timenetsky, Jorge. Molecular characterization of ureaplasmas isolated from reproductive tract of goats and sheep from Brazil. Brazilian Journal of Microbiology (Impresso). v. pii, p. S1517-8382(16)3, 2017. Qualis: B1
158.	PATANÉ, JOSÉ S.L. ; MARTINS, JOAQUIM ; CASTELÃO, ANA BEATRIZ ; NISHIBE, CHRISTIANE ; MONTERA, LUCIANA ; BIGI, FABIANA ; ZUMÁRRAGA, MARTIN J. ; CATALDI, ANGEL A. ; JUNIOR, ANTÔNIO FONSECA ; ROXO, ELIANA ; OSÓRIO, ANA LUIZA A.R. ; JORGE, KLAUDIA S. ; THACKER, TYLER C. ; Almeida, Nalvo F. ; ARAÚJO, FLABIO R. ; Setubal, João C.. Patterns and Processes of Mycobacterium bovis Evolution Revealed by Phylogenomic Analyses. Genome Biology and Evolution. v. 9, p. 521-535, 2017. Qualis: A1
159.	PAULA, V. ; FORLENZA, O. V. ; GATTAZ, W. ; SCHALLING, M. ; VILLAESCUSA, C. ; VALLADA, H. ; BRENTANI. H. Integrated analysis of microarray and proteomics data by hippocampal rat neurons and human IPS neurons treated with different doses of lithium. Em: XXV World Congress of Psychiatric Genetics (WCPG), 2017, Orlando, Florida. European Neuropsychopharmacology, p. 77, 2017.
160.	PEDROSO, JOSÉ LUIZ ; MUNFORD, VERIDIANA ; BASTOS, ANDRÉ UCHIMURA ; CASTRO, LIGIA PEREIRA DE ; MARUSSI, VICTOR HUGO ROCHA ; SILVA, GISELE SAMPAIO ; ARITA, JULIANA HARUMI ; Menck, Carlos F.M. ; BARSOTTINI, ORLANDO G.. LMNB1 mutation causes cerebellar involvement and a genome instability defect. JOURNAL OF THE NEUROLOGICAL SCIENCES. v. 379, p. 249-252, 2017. Qualis: A4
161.	PELLEGRINA, DIOGO ; SEVERINO, PATRICIA ; BARBEIRO, HERMES ; DE SOUZA, HERALDO ; MACHADO, MARCEL ; PINHEIRO-DA-SILVA, FABIANO ; REIS, EDUARDO. Insights into the Function of Long Noncoding RNAs in Sepsis Revealed by Gene Co-Expression Network Analysis. Non-Coding RNA. v. 3, p. 5, 2017. Qualis: B2
162.	PRADA-MEDINA, CESAR A. ; FUKUTANI, KIYOSHI F. ; PAVAN KUMAR, NATHELLA ; GIL-SANTANA, LEONARDO ; BABU, SUBASH ; LICHTENSTEIN, FLÁVIO ; WEST, KIM ; SIVAKUMAR, SHANMUGAM ; MENON, PRADEEP A. ; VISWANATHAN, VIJAY ; ANDRADE, BRUNO B. ; Nakaya, Helder I. ; KORNFELD, HARDY. Systems Immunology of Diabetes-Tuberculosis Comorbidity Reveals Signatures of Disease Complications. Scientific Reports. v. 7, p. 1, 2017. Qualis: A2
163.	PROW, NATALIE A. ; TANG, BING ; Gardner, Joy ; LE, THUY T. ; TAYLOR, ADAM ; POO, YEE S. ; NAKAYAMA, ERI ; HIRATA, THIAGO D. C. ; Nakaya, Helder I. ; SLONCHAK, ANDRII ; MUKHOPADHYAY, PAMELA ; MAHALINGAM, SURESH ; SCHRODER, WAYNE A. ; KLIMSTRA, WILLIAM ; Suhrbier, Andreas. Lower temperatures reduce type I interferon activity and promote alphaviral arthritis. PLoS Pathogens. v. 13, p. e1006788, 2017. Qualis: A1
164.	PUIGVERT, MARINA ; GUARISCHI-SOUSA, RODRIGO ; ZULUAGA, PAOLA ; COLL, NÚRIA S. ; MACHO, ALBERTO P. ; Setubal, João C. ; VALLS, MARC. Transcriptomes of Ralstonia solanacearum during Root Colonization of Solanum commersonii. Frontiers in Plant Science. v. 8, p. 370, 2017. Qualis: A1
165.	QUINTO-SANCHEZ, M. ; CINTAS, C. ; Cerqueira, Caio C S ; RAMALLO, V. ; ACUNA-ALONZO, V. ; ADHIKARI, K. ; CASTILLO, L. ; GOMEZ-VALDES, J. ; EVERARDO, P. ; AVILA, F. ; HÜNEMEIER, T. ; JARAMILLO, C. ; ARIAS, W. ; FUENTES, M. ; Gallo, C ; Poletti, G ; SCHULER-FACCINI, L. ; BORTOLINI, M. C. ; CANIZALES-QUINTEROS, S. ; Rothhammer F ; et.al. Socioeconomic Status Is Not Related with Facial Fluctuating Asymmetry: Evidence from Latin-American Populations. Plos One. v. 12, p. e0169287, 2017. Qualis: A1
166.	Racioppi, Luigi ; LENTO, WILLIAM ; HUANG, WEI ; ARVAI, STEPHANIE ; DOAN, PHUONG L ; HARRIS, JEFFREY R ; MARCON, FERNANDO ; Nakaya, Helder I ; LIU, YAPING ; CHAO, NELSON. Calcium/calmodulin-dependent kinase kinase 2 regulates hematopoietic stem and progenitor cell regeneration. Cell Death & Disease. v. 8, p. e3076, 2017. Qualis: A2
167.	RAICES, J. ; OTTO, P. A. ; Vibranovski, M.D.. Model of Haploid Selection for the Evolution of New Genes. 2017. Apresentação de Trabalho/Seminário
168.	RAICES, J. ; OTTO, P. A. ; Vibranovski, M.D.. Resolving differences on the chromosomal distributions of Drosophila new genes. 2017. Apresentação de Trabalho/Conferência ou palestra
169.	REALES, GUILLERMO ; ROVARIS, DIEGO L. ; JACOVAS, VANESSA C. ; Hünemeier, Tábita ; SANDOVAL, JOSÉ R. ; SALAZAR-GRANARA, ALCIBIADES ; DEMARCHI, DARÍO A. ; TARAZONA-SANTOS, EDUARDO ; FELKL, ALINE B. ; SERAFINI, MICHELE A. ; Salzano, Francisco M. ; BISSO-MACHADO, RAFAEL ; COMAS, DAVID ; PAIXÃO-CÔRTES, VANESSA R. ; Bortolini, Maria Cátira. A tale of agriculturalists and hunter-gatherers: Exploring the thrifty genotype hypothesis in native South Americans. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY. v. 00, p. 000-000, 2017. Qualis: A2
170.	REIS, VIVIANE NERI DE SOUZA ; KITAJIMA, JOÃO PAULO ; TAHIRA, ANA CAROLINA ; FEIO-DOS-SANTOS, ANA CECÍLIA ; FOCK, RODRIGO AMBRÓSIO ; LISBOA, BIANCA CRISTINA GARCIA ; SIMÕES, SÉRGIO NERY ; KREPISCHI, ANA C. V. ; Rosenberg, Carla ; LOURENÇO, NAILA CRISTINA ; PASSOS-BUENO, MARIA RITA ; BRENTANI, HELENA. Integrative Variation Analysis Reveals that a Complex Genotype May Specify Phenotype in Siblings with Syndromic Autism Spectrum Disorder. Plos One. v. 12, p. e0170386, 2017. Qualis: A1
171.	REYES, ALEJANDRO ; P. ALVES, JOÃO MARCELO ; Durham, Alan Mitchell ; Gruber, Arthur. Use of profile hidden Markov models in viral discovery: current insights. Advances in Genomics and Genetics. v. Volume 7, p. 29-45, 2017. Qualis: C
172.	REZENDE LIMA, WÂNIA ; CORREA MARTINS, DAVID ; SIMÔNIO PARREIRA, KLEBER ; SCARPELLI, PEDRO ; SANTOS DE MORAES, MIRIAM ; TOPALIS, PANTELIS ; FUMIO HASHIMOTO, RONALDO ; R. S. GARCIA, CÉLIA. Genome-wide analysis of the human malaria parasite Plasmodium falciparum transcription factor PfNF-YB shows interaction with a CCAAT motif. Oncotarget. v. 8, p. 113987-114001, 2017. Qualis: A2
173.	RIBEIRO, A. H. ; LOTUFO, P. ; FUJITA, A ; GOULART, A. ; CHOR, D. ; MILL, J. G. ; BENSENOR, I. ; SANTOS, I. S.. Association Between Short-Term Systolic Blood Pressure Variability and Carotid Intima-Media Thickness in ELSA-Brasil Baseline. AMERICAN JOURNAL OF HYPERTENSION. v. 1, p. 1, 2017. Qualis: A3
174.	RODRIGUES, MARIA GABRIELA FONTANETTI ; SOARES, MURILO RACY ; GIMENEZ, DANIELE FERNANDA JOVINO ; FONSECA, LARISSA FERNANDA SIMIELLI ; TORRIERI, ERICO ; RAMOS, ESTER SILVEIRA ; Giuliatti, Silvana. Detection of differentially methylated regions of irradiated fig tree selections. SCIENTIA AGRICOLA. v. 74, p. 285-293, 2017. Qualis: A2
175.	ROSSI, F ; GIRARDELLO, R ; MORAIS, C ; CURY, AP ; MARTINS, LF ; SILVA, AM ; ABDALA, E ; SETUBAL, JC ; DUARTE, AJ. Plasmid-mediated mcr-1 in carbapenem-susceptible Escherichia coli ST156 causing a blood infection: an unnoticeable spread of colistin resistance in Brazil?. Clinics. v. 72, p. 642-644, 2017. Qualis: B4
176.	ROVERSI, F. M. ; PERICOLE, F. V. ; MACHADO-NETO, J. A. ; DUARTE, A. S. ; LONGHINI, A. L. L. ; CORROCHER, F. A. ; PALODETTO, B. ; FERRO, K. P. ; ROSA, R. G. ; Baratti, Mariana O ; Verjovski-Almeida, S. ; TRAINA, F. ; MOLINARI, A. ; BOTTA, M. ; SAAD, S. T. O.. Hematopoietic cell kinase (HCK) is a potential therapeutic target for dysplastic and leukemic cells due to integration of erythropoietin/PI3K pathway and regulation of erythropoiesis. BIOCHIMICA ET BIOPHYSICA ACTA. MOLECULAR BASIS OF DISEASE. v. 1863, p. 450-461, 2017. Qualis: Não identificado (MOLECULAR BASIS OF DISEASE)
177.	Schuch, André Passaglia ; MORENO, NATÁLIA CESTARI ; SCHUCH, NATIELEN JACQUES ; Menck, Carlos Frederico Martins ; GARCIA, CAMILA CARRIÃO MACHADO. Sunlight damage to cellular DNA: focus on oxidatively generated lesions. Free Radical Biology & Medicine. v. xxx, p. 1, 2017. Qualis: A1
178.	SHERIDAN, MEGAN A. ; YUNUSOV, DINAR ; BALARAMAN, VELMURUGAN ; ALEXENKO, ANDREI P. ; YABE, SHINICHIRO ; Verjovski-Almeida, Sergio ; SCHUST, DANNY J. ; FRANZ, ALEXANDER ; SADOVSKY, YOEL ; EZASHI, TOSHIHIKO ; ROBERTS, R. MICHAEL. Vulnerability of primitive human placental trophoblast to Zika virus. Proceedings of the National Academy of Sciences of the United States of America. v. 00, p. 201616097, 2017. Qualis: A1
179.	Souza, FAL ; Guimarães, LO ; Guiliatti, S. ; Gerson, S ; FONTES, A. M.. Genetic Mechanisms of Resistance to Ara-C in Acute Myeloid Leukemia. Em: XIII Congresso da Mutagen-Brasil, 2017, Ribeirão Preto. Resumos (Abstracts), p. MS17, 2017.
180.	SOUZA, GLAUCIA MENDES; BALLESTER, MARIA VICTORIA R. ; DE BRITO CRUZ, CARLOS HENRIQUE ; CHUM, HELENA ; DALE, BRUCE ; DALE, VIRGINIA H. ; FERNANDES, ERICK C.F. ; FOUST, TOM ; KARP, ANGELA ; LYND, LEE ; MACIEL, RUBENS ; MILANEZ, ARTUR ; NIGRO, FRANCISCO ; OSSEWEIJER, PATRICIA ; VERDADE, LUCIANO M. ; VICTORIA, REYNALDO L. ; VAN DER WIELEN, LUUK. The role of bioenergy in a climate-changing world. ENVIRONMENTAL DEVELOPMENT. v. 23, p. 57-64, 2017. Qualis: A1
181.	SOUZA, GM. Bioenergy Research. Matchmaking meeting for new projects. 2017. Apresentação de Trabalho/Conferência ou palestra
182.	SOUZA, GM. Bioenergia e sustentabilidade. 2017. Apresentação de Trabalho/Seminário
183.	SOUZA, GM. Bioenergy & Sustainability: bridging the gaps. 2017. Apresentação de Trabalho/Conferência ou palestra
184.	SOUZA, GM. Bioenergy Research. Workshop Denmark-Brazil. 2017. Apresentação de Trabalho/Conferência ou palestra
185.	SOUZA, GM. Bioenergy Technology, Innovation and the Environment. 2017. Apresentação de Trabalho/Conferência ou palestra
186.	SOUZA, GM. The sugarcane genome. 2017. Apresentação de Trabalho/Conferência ou palestra
187.	SOUZA, GM. Biofuture Summit 17. 2017. Apresentação de Trabalho/Outra
188.	SOUZA, GM. Task Force on Sustainability. 2017. Apresentação de Trabalho/Outra
189.	SPINDOLA, LETICIA MARIA ; PAN, PEDRO MARIO ; MORETTI, PATRICIA NATALIA ; OTA, VANESSA KIYOMI ; SANTORO, MARCOS LEITE ; COGO-MOREIRA, HUGO ; GADELHA, ARY ; SALUM, GIOVANNI ; MANFRO, GISELE GUS ; MARI, JAIR JESUS ; BRENTANI, HELENA ; GRASSI-OLIVEIRA, RODRIGO ; BRIETZKE, ELISA ; MIGUEL, EURIPEDES CONSTANTINO ; ROHDE, LUIS AUGUSTO ; SATO, JOÃO RICARDO ; BRESSAN, RODRIGO AFFONSECA ; BELANGERO, SINTIA IOLE. Gene expression in blood of children and adolescents: Mediation between childhood maltreatment and major depressive disorder. Journal of Psychiatric Research. v. 92, p. 24-30, 2017. Qualis: A1
190.	SRIVASTAVA, D. ; Barroso da Silva, Fernando Luís ; GUBBINS, K. E. ; SANTISO, E. E.. pKa shifts due to the presence of a polyelectrolyte chain around milk proteins. Em: Symposium on Molecular Theory and Modeling, 2017, Raleigh, NC. Symposium on Molecular Theory and Modeling. Raleigh, NC: NCSU, p. 22-22, 2017.
191.	SRIVASTAVA, D. ; SANTISO, ERIK ; GUBBINS, KEITH E. ; Barroso da Silva, Fernando L.. Painel: pKa Changes due to the Presence of a Polyelectrolyte Chain around Milk Proteins. 2017. Apresentação de Trabalho/Simpósio
192.	SRIVASTAVA, DEEPTI ; SANTISO, ERIK ; GUBBINS, KEITH E. ; barroso da silva, fernando luis. Computationally mapping pKa shifts due to the presence of a polyelectrolyte chain around whey proteins. LANGMUIR. v. 33, p. 11417-11428, 2017. Qualis: A1
193.	TAMAROZZI, E. R. ; ARNS, T. C. ; GIULIATTI, S.. In silico Analysis of Interaction between Oncoprotein E6 and European Variants of HPV type 16 with Molecular Targets E6AP and p53. Em: Third International Symposium on Inflammatory Diseases - INFLAMMA III, 2017, Ribeirão Preto, SP. Abstracts, v. 1, p. S59-S60, 2017.
194.	TAMAYO, M. V. ; SCHUCH, A.P. ; FUENTES-LEON, F. ; MENCK CF ; Sánchez-Lamar, A.. Extracto acuoso de Pinus caribaea inhibe el daño inducido por radiaciones ultravioletas, en ADN plasmídico. JOURNAL OF PHARMACY & PHARMACOGNOSY RESEARCH. v. 5, p. 262-269, 2017.Qualis: B3
195.	TAVARES, EQP ; GRANDIS, A ; LEMBKE, CG ; SOUZA, GM ; PURGATTO, E ; DE SOUZA, AP ; BUCKERIDGE, MS. Roles of Auxin and Ethylene in Aerenchyma Formation in Sugarcane Roots. PLANT SIGNALLING & BEHAVIOR (ONLINE). v. 1, p. 00-00, 2017. Qualis: A3 (PLANT SIGNALING & BEHAVIOR)
196.	Van Sluys, M. A. Aplicações do genoma em Biotecnologia. 2017. Apresentação de Trabalho/Conferência ou palestra
197.	VAN SLUYS, M.-A. ; Van Sluys, Marie Anne. Transposable elements between two karma; evolutionary and cell biology viewpoints. 2017. Apresentação de Trabalho/Conferência ou palestra
198.	Van Sluys, Marie Anne. W954-Virus-like Attachment Sites as Structural Landmarks of Plants Retrotransposons. 2017. Apresentação de Trabalho/Simpósio
199.	VASCONCELOS, E. J. R. ; DASILVA, LUCAS FERREIRA ; PIRES, D. S. ; LAVEZZO, G. M. ; PEREIRA, ADRIANA DA SILVA ANDRADE ; AMARAL, MURILO S. ; Verjovski-Almeida, S.. The Schistosoma mansoni genome encodes thousands of long non-coding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports. v. 7, p. 10508, 2017. Qualis: A2
200.	VIDAL, MACIEL C. ; Sato, João R. ; BALARDIN, JOANA B. ; TAKAHASHI, DANIEL Y. ; Fujita, André. ANOCVA in R: A Software to Compare Clusters between Groups and Its Application to the Study of Autism Spectrum Disorder. Frontiers in Neuroscience. v. 11, p. 1, 2017. Qualis: A2
201.	Vieira, Natassia M. ; SPINAZZOLA, JANELLE M. ; ALEXANDER, MATTHEW S. ; Moreira, Yuri B. ; KAWAHARA, GENRI ; GIBBS, DEVIN E. ; MEAD, LILLIAN C. ; Verjovski-Almeida, Sergio ; Zatz, Mayana ; KUNKEL, LOUIS M.. Repression of phosphatidylinositol transfer protein α ameliorates the pathology of Duchenne muscular dystrophy. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (ONLINE). v. 114, p. 201703556, 2017. Qualis: A1
202.	VILELA, MARIANE DE MENDONÇA ; DEL-BEM, LUIZ-EDUARDO ; Van Sluys, Marie-Anne ; DE SETTA, NATHALIA ; KITAJIMA, JOÃO PAULO ; CRUZ, GUILHERME MARCELO QUEIROGA ; SFORÇA, DANILO AUGUSTO ; DE SOUZA, ANETE PEREIRA ; FERREIRA, PAULO CAVALCANTI GOMES ; GRATIVOL, CLÍCIA ; CARDOSO-SILVA, CLAUDIO BENICIO ; Vicentini, Renato ; VINCENTZ, Michel. Analysis of three sugarcane homo/homeologous regions suggests independent polyploidization events of Saccharum officinarum and Saccharum spontaneum. Genome Biology and Evolution. v. 9, p. evw293-278, 2017. Qualis: A1
203.	WANG, NIAN ; PIERSON, ELIZABETH A. ; SETUBAL, JOÃO CARLOS ; XU, JIN ; LEVY, JULIEN G. ; ZHANG, YUNZENG ; LI, JINYUN ; RANGEL, LUIZ THIBERIO ; MARTINS, JOAQUIM. The Candidatus Liberibacter-Host Interface: Insights into Pathogenesis Mechanisms and Disease Control. Annual Review of Phytopathology. v. 55, p. 451-482, 2017. Qualis: A1
204.	WILEY, K. ; MIGUEL, E. C. ; POLANCZYK, G. ; BASTOS, E. ; EUCLYDES, E. ; BRENTANI, H.. Exposure to traumatic events and hair coprtisol concentrations in a cohort of pregmant adolescents in urban Brazil. Em: 42nd Annual Meeting Human Biology Association, 2017, New Orleans, LA. American Journal of Human Biology, v. 29, p. 49-49, 2017.
205.	YAGURA, TEITI ; SCHUCH, ANDRÉ PASSAGLIA ; GARCIA, CAMILA CARRIÃO MACHADO ; ROCHA, CLARISSA RIBEIRO REILY ; MORENO, NATÁLIA CESTARI ; ANGELI, JOSÉ PEDRO FRIEDMANN ; MENDES, DAVI ; Severino, Divinomar ; BIANCHINI SANCHEZ, ANGELICA ; DI MASCIO, P. ; de Medeiros, Marisa Helena Gennari ; MENCK CF. Direct participation of DNA in the formation of singlet oxygen and base damage under UVA irradiation. FREE RADICAL BIOLOGY AND MEDICINE. v. 108, p. 86-93, 2017. Qualis: A1 (FREE RADICAL BIOLOGY & MEDICINE)
206.	YANCY-CABALLERO, DAISON ; LING, LIU Y. ; ARCHILHA, NATHALY L. ; FERREIRA, J. E. ; DRIEMEIER, C.. Mineral Particles in Sugar Cane Bagasse: Localization and Morphometry Using Microtomography Analysis. ENERGY & FUELS (ONLINE). v. 31, p. 12288-12296, 2017. Qualis: A1
207.	ZIMPEL, CRISTINA KRAEMER ; BRANDAO, P. ; SOUZA, A. F. ; FERREIRA NETO, J. S. ; HEINEMANN, MARCOS BRYAN ; GUIMARÃES, A. M. S.. Comparative analysis among Mycobacterium bovis genomes indicates the occurrence of pseudogenization events. Em: I Workshop in Microbial Molecular Biology, 2017, São Paulo. Livro de Resumos do I Workshop in Microbial Molecular Biology, v. 1, p. 9, 2017.
208.	ZIMPEL, CRISTINA KRAEMER ; BRANDÃO, PAULO E. ; DE SOUZA FILHO, ANTÔNIO F. ; de Souza, Robson F. ; IKUTA, CÁSSIA Y. ; FERREIRA NETO, JOSÉ SOARES ; CAMARGO, NAILA C. SOLER ; HEINEMANN, MARCOS BRYAN ; GUIMARÃES, ANA M. S.. Complete Genome Sequencing of Mycobacterium bovis SP38 and Comparative Genomics of Mycobacterium bovis and M. tuberculosis Strains. Frontiers in Microbiology. v. 8, p. 2389, 2017. Qualis: A1
209.	ZIMPEL, CRISTINA KRAEMER ; BRUM, J. S. ; SOUZA, A. F. ; BIONDO, A. W. ; PEROTTA, J. H. ; DIB, C. C. ; Bonat, Marcelo ; FERREIRA NETO, JOSÉ SOARES ; BRANDAO, P. E. ; HEINEMANN, MARCOS BRYAN ; GUIMARÃES, A. M. S.. Mycobacterium bovis in a European bison (Bison bonasus) raises concerns about tuberculosis in Brazilian captive wildlife populations: a case report. BMC Research Notes. v. 10, p. xxx, 2017.Qualis: B1

2016

1.	ADHIKARI, K. ; FONTANIL, T. ; Cal, S. ; Mendoza-Revilla, J. ; FUENTES, M. ; Chacon-Duque, J. C. ; AL-SAADI, F. ; JOHANSSON, J. ; QUINTO-SANCHEZ, M. ; JARAMILLO, C. ; ARIAS, W. ; BARQUERA, R. ; MACIN, G. ; GOMEZ-VALDES, J. ; VILLAMIL-RAMIREZ, H. ; HÜNEMEIER, T. ; RAMALLO, V. ; CERQUEIRA, C. C. S. ; HURTADO, M. ; VILLEGAS, V. ; et.al. A genome-wide association scan in admixed Latin Americans identifies loci influencing facial and scalp hair features. Nature Communications. v. 7, p. 10815, 2016. Qualis: A1
2.	ADHIKARI, K. ; FUENTES, M. ; Mendoza-Revilla, J. ; Chacon-Duque, J. C. ; QUINTO-SANCHEZ, M. ; ACUNA-ALONZO, V. ; JARAMILLO, C. ; ARIAS, W. ; BARQUERA, R. ; MACIN, G. ; GOMEZ-VALDES, J. ; VILLAMIL-RAMIREZ, H. ; HÜNEMEIER, T. ; RAMALLO, V. ; CERQUEIRA, C. C. S. ; HURTADO, M. ; VILLEGAS, V. ; GRANJA, V. ; GALLO, C. ; Poletti, G ; et.al. A genome-wide association scan implicates DCHS2, RUNX2, GLI3, PAX1 and EDAR in human facial variation. Nature Communications. v. 7, p. 11616, 2016. Qualis: A1
3.	AFIONIS, STAVROS ; STRINGER, LINDSAY C. ; FAVRETTO, NICOLA ; TOMEI, JULIA ; Buckeridge, Marcos S.. Unpacking Brazil?s Leadership in the Global Biofuels Arena: Brazilian Ethanol Diplomacy in Africa. Global Environmental Politics. v. 16, p. 127-150, 2016. Qualis: Não identificado (GLOBAL ENVIRONMENTAL POLITICS)
4.	ALMEIDA, DIEGO DANTAS ; KITAJIMA, JOÃO PAULO ; NISHIYAMA, MILTON YUTAKA ; CONDOMITTI, GEORGE WILLIAN ; OLIVEIRA, URSULA CASTRO DE ; SETÚBAL, JOÃO CARLOS ; JUNQUEIRA-DE-AZEVEDO, INÁCIO L. M.. The complete mitochondrial genome of Bothrops jararaca (Reptilia, Serpentes, Viperidae). Mitochondrial DNA Part B. v. 1, p. 907-908, 2016. Qualis: B4 (MITOCHONDRIAL DNA PART A)
5.	ALMEIDA, FERNANDA NASCIMENTO ; TUNES, GISELA ; DA COSTA, JULIO CEZAR BRETTAS ; Sabino, Ester Cerdeira ; MENDRONE-JÚNIOR, ALFREDO ; Ferreira, João Eduardo. A provenance model based on declarative specifications for intensive data analyses in hemotherapy information systems. Future Generation Computer Systems. v. 59, p. 105-113, 2016. Qualis: A1
6.	ALVES, JOÃO M. P. ; DE OLIVEIRA, ANDRÉ L. ; SANDBERG, TATIANA O. M. ; MORENO-GALLEGO, JAIME L. ; DE TOLEDO, MARCELO A. F. ; DE MOURA, ELISABETH M. M. ; OLIVEIRA, LILIANE S. ; Durham, Alan M. ; MEHNERT, DOLORES U. ; ZANOTTO, PAOLO M. DE A. ; REYES, ALEJANDRO ; Gruber, Arthur. GenSeed-HMM: A Tool for Progressive Assembly Using Profile HMMs as Seeds and its Application in Alpavirinae Viral Discovery from Metagenomic Data. Frontiers in Microbiology (Online). v. 7, p. 00269, 2016. Qualis: A1
7.	ALVES, WONDER A. L. ; Gobber, Charles F. ; Araújo, Sidnei A. ; HASHIMOTO, RONALDO F.. Segmentation of Retinal Blood Vessels Based on Ultimate Elongation Opening. Em: Campilho A., Karray F.. (Org.). Lecture Notes in Computer Science. 1ed. : Springer International Publishing. 2016.v. 9730, p. 727-733.
8.	ANTUNES, LUCIANA PRINCIPAL ; MARTINS, LAYLA FARAGE ; PEREIRA, ROBERTA VERCIANO ; THOMAS, ANDREW MALTEZ ; BARBOSA, DEIBS ; LEMOS, LEANDRO NASCIMENTO ; SILVA, GIANLUCA MAJOR MACHADO ; MOURA, LIVIA MARIA SILVA ; EPAMINO, GEORGE WILLIAN CONDOMITTI ; DIGIAMPIETRI, LUCIANO ANTONIO ; LOMBARDI, KAREN CRISTINA ; RAMOS, PATRICIA LOCOSQUE ; QUAGGIO, RONALDO BENTO ; DE OLIVEIRA, JULIO CEZAR FRANCO ; PASCON, RENATA CASTIGLIONI ; CRUZ, JOÃO BATISTA DA ; DA SILVA, ALINE MARIA ; SETUBAL, JOÃO CARLOS. Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics. Scientific Reports. v. 6, p. 38915, 2016. Qualis: A2
9.	ARANHA, B. E. ; SILVA, G. M. ; TAMAROZZI, E. R. ; GIULIATTI, S. Triagem Virtual da Oncoproteína E6 do Papilomavírus Humano (HPV). Em: 24º SIICUSP: Simpósio Internacional de Iniciação Científica da Universidade de São Paulo, 2016, Ribeirão Preto, SP. Anais, v. 1, p. 1-1, 2016.
10.	ARANHA, B. E. ; SILVA, G. M. ; TAMAROZZI, E. R. ; GIULIATTI, S. Triagem Virtual da Oncoproteína E6 do Papilomavírus Humano (HPV). Em: XII Prêmio Jovem Cientista, 2016, Ribeirão Preto, SP. Resumos, v. 1, p. 1-1, 2016.
11.	ARNS, T. C. ; ANTUNES, D. A. ; TAMAROZZI, E. R. ; KAVRAKI, L. E. ; GIULIATTI, S ; DONADI, E. A.. In silico Modeling and Molecular Dynamics of Major Histocompatibility Complex HLA-G7 Isoform. Em: XLI Congress of the Brazilian Society of Immunology, 2016, Campos do Jordão, SP. Abstracts, v. 1, p. 1-1, 2016.
12.	ARNS, T. C. ; ANTUNES, D. A. ; TAMAROZZI, E. R. ; KAVRAKI, L. E. ; GIULIATTI, S ; DONADI, E. A.. In silico Modeling and Molecular Dynamics of Major Histocompatibility Complex HLA-G7 Isoform. Em: VIII Escola de Modelagem Molecular em Sistemas Biológicos, 2016, Petrópolis, RJ. Livro de Resumos, v. 1, p. 125-125, 2016.
13.	BARBOSA, A. R. ; TAHIRA, A. C. ; BRENTANI, H.. Differential Gene Expression Analysis of Placentas from Mus musculus Exposed to Different Stress Conditions. 2016. Apresentação de Trabalho/Congresso
14.	barroso da silva, fernando luis; PASQUALI, SAMUELA ; DERREUMAUX, PHILIPPE ; DIAS, Luis Gustavo. Electrostatics analysis of the mutational and pH effects of the N-terminal domain self-association of the Major Ampullate Spidroin. Soft Matter (Print). v. 12, p. 5600-5612, 2016. Qualis: A2
15.	Barroso da Silva, Fernando Luís. Palestra convidada: Protein complexation driven by electrostatic interactions (ENS Cachan/França). 2016. Apresentação de Trabalho/Conferência ou palestra
16.	Barroso da Silva, Fernando Luís. Palestra convidada: Protein complexation driven by electrostatic interactions (Unige/Suiça). 2016. Apresentação de Trabalho/Conferência ou palestra
17.	Barroso da Silva, Fernando Luís. Palestra convidada: Protein complexation driven by electrostatic interactions (IBPC/França). 2016. Apresentação de Trabalho/Conferência ou palestra
18.	Barroso da Silva, Fernando Luís. Palestra convidada: Electrostatic interactions in and between biomolecules: Developing and applying fast constant pH methods in biological systems (UCD/Irlanda). 2016. Apresentação de Trabalho/Conferência ou palestra
19.	Barroso da Silva, Fernando Luís. Palestra convidada: Protein complexation driven by electrostatic interactions (INTS/França). 2016. Apresentação de Trabalho/Conferência ou palestra
20.	Barroso da Silva, Fernando Luís. Palestra convidada: Electrostatic Interactions in and between Biomolecules: Developing and Applying Fast Constant pH Methods in Biological Systems (CCES/Unicamp). 2016. Apresentação de Trabalho/Simpósio
21.	Barroso da Silva, Fernando Luís. Palestra: Simplified models to rationalize complex protein interactions in food and pharma (CECAM/Irlanda). 2016. Apresentação de Trabalho/Simpósio
22.	Barroso da Silva, Fernando Luís. Palestra convidada: Electrostatic interactions in and between biomolecules: Developing and applying fast constant pH methods in Biological systems (NCSU/EUA). 2016. Apresentação de Trabalho/Conferência ou palestra
23.	BASSALO, M. ; TEIXEIRA, G. S. ; PEREIRA, G. A. G. ; VIEIRA, ANDREIA PRATA ; Van Sluys, Marie Anne ; BARAU, J. ; TAVARES, K. C. S. ; BORSOI, J. ; PEREIRA, L. V.. Metodos para uso de CRISPR. Em: Tiago Campos Pereira. (Org.). Introdução a Técnica de CRISPR. 1ed.Ribeirao Preto. : SBG. 2016.v. 1, p. 151-192.
24.	BASTOS, E. P. ; BRENTANI, H. ; PEREIRA, C. A. B. ; POLPO, A. ; LIMA, L. ; PUGA, R. D. ; PASINI, F. S. ; OSORIO, C. A. B. T. ; ROELA, R. A. ; ACHATZ, M. I. ; TRAPÉ, A. P. ; GONZALEZ-ANGULO, A. M. ; BRENTANI, M. M.. A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer. Plos One. v. 11, p. e0154325, 2016. Qualis: A1
25.	BOROVINA JOSKO, J. M. ; FERREIRA, J. E.. Visualization properties for data quality visual assessment: An exploratory case study. Information Visualization (Print). v. 1, p. 1-20, 2016. Qualis: B1
26.	BOROVINA JOSKO, J. M. ; OIKAWA, M. K. ; FERREIRA, J. E.. A Formal Taxonomy to Improve Data Defect Description. Em: Database Systems for Advanced Applications, v. 9645, p. 307-320, 2016.Qualis: Não identificado (Database Systems for Advanced Applications)
27.	BRENTANI, H. P. Transtornos do Espectro autista. 2016. Apresentação de Trabalho/Outra
28.	BRENTANI. HP; POLANCZYK, G. ; MIGUEL, E. C.. Brazil and Autism. Em: Fred R. Volkmar. (Org.). Encyclopedia of Autism Spectrum Disorders. 1ªed. : Springer New York. 2016.p. 1-11.
29.	BUCKERIDGE, M. S. Sugarcane as a Bioenergy Source: History, performance, policies and perspectives of second-generation bioethanol in Brazil. 2016. Apresentação de Trabalho/Simpósio
30.	BUCKERIDGE, M. S. How the Glycomic Code affects the Human Umwelt. 2016. Apresentação de Trabalho/Conferência ou palestra
31.	BUCKERIDGE, M. S. Desvendando o Código Glicômico da Parede Celular para aumentar a eficiência de hidrólise enzimática na produção de etanol de segunda geração. 2016. Apresentação de Trabalho/Seminário
32.	BUCKERIDGE, M. S. The Glycomic code of sugarcane cell walls and the production of bioenergy. 2016. Apresentação de Trabalho/Conferência ou palestra
33.	BUCKERIDGE, M. S. Mudanças Climáticas e seus efeitos sobre a biodiversidade. 2016. Apresentação de Trabalho/Conferência ou palestra
34.	BUCKERIDGE, M.S. 146. Key Messages of IPCC?s Fifth Assessment Report for Central and South America. 2016. Apresentação de Trabalho/Comunicação
35.	Busch, Michael P. ; Sabino, Ester C. ; BRAMBILLA, DONALD ; LOPES, MARIA ESTHER ; Capuani, Ligia ; CHOWDHURY, DHULY ; MCCLURE, CHRISTOPHER ; LINNEN, JEFFREY M. ; PRINCE, HARRY ; SIMMONS, GRAHAM ; LEE, TZONG-HAE ; KLEINMAN, STEVEN ; CUSTER, BRIAN. Duration of Dengue Viremia in Blood Donors and Relationships Between Donor Viremia, Infection Incidence and Clinical Case Reports During a Large Epidemic. JOURNAL OF INFECTIOUS DISEASES. v. 214, p. 49-54, 2016. Qualis: A1 (THE JOURNAL OF INFECTIOUS DISEASES)
36.	CANEVARI, Renata A. ; MARCHI, FABIO A. ; DOMINGUES, MARIA A. C. ; DE ANDRADE, VICTOR PIANA ; CALDEIRA, JOSÉ R. F. ; VERJOVSKI-ALMEIDA, Sergio ; ROGATTO, Silvia R. ; Reis, Eduardo M. ; REIS, EM. Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma. Tumor Biology. v. 37, p. 13855-13870, 2016. Qualis: A4
37.	CAPPI, C ; Brentani, H ; LIMA, L ; SANDERS, S J ; ZAI, G ; DINIZ, B J ; REIS, V N S ; HOUNIE, A G ; CONCEIÇÃO DO ROSÁRIO, M ; MARIANI, D ; REQUENA, G L ; PUGA, R ; SOUZA-DURAN, F L ; SHAVITT, R G ; PAULS, D L ; MIGUEL, E C ; FERNANDEZ, T V. Whole-exome sequencing in obsessive-compulsive disorder identifies rare mutations in immunological and neurodevelopmental pathways. Translational Psychiatry. v. 6, p. e764, 2016. Qualis: A1
38.	Cappi, Carolina ; DINIZ, JULIANA BELO ; REQUENA, GUARACI L. ; LOURENÇO, TIAYA ; LISBOA, BIANCA CRISTINA GARCIA ; BATISTUZZO, MARCELO CAMARGO ; Marques, Andrea H. ; HOEXTER, MARCELO Q. ; PEREIRA, CARLOS A. ; MIGUEL, EURIPEDES CONSTANTINO ; BRENTANI, HELENA. Epigenetic evidence for involvement of the oxytocin receptor gene in obsessive-compulsive disorder. BMC Neuroscience (Online). v. 17, p. 79, 2016. Qualis: A4
39.	CARDOSO, CLARECI SILVA ; Sabino, Ester Cerdeira ; OLIVEIRA, CLAUDIA DI LORENZO ; DE OLIVEIRA, LEA CAMPOS ; FERREIRA, ARIELA MOTA ; CUNHA-NETO, EDÉCIO ; BIERRENBACH, ANA LUIZA ; Ferreira, João Eduardo ; HAIKAL, DESIRÉE SANT'ANA ; REINGOLD, ARTHUR L ; RIBEIRO, ANTONIO LUIZ P. Longitudinal study of patients with chronic Chagas cardiomyopathy in Brazil (SaMi-Trop project): a cohort profile. BMJ Open. v. 6, p. e011181, 2016. Qualis: A1
40.	CARDOZO, FLÁVIO AUGUSTO ; ZIMPEL, CRISTINA KRAEMER ; Guimaraes, Ana Marcia Sa ; PESSOA, ADALBERTO ; RIVERA, IRMA NELLY GUTIERREZ. Draft Genome Sequence of Marine-Derived CHZ306, a Potential Chitinase Producer Strain. Genome Announcements. v. 4, p. e01293-16, 2016. Qualis: B3
41.	CARVALHO, S. P. ; MACHADO-LIMA, A. ; BRENTANI, H. P. ; FOCK, R. A. ; BRUNONI, D. ; NUNES, F. L.. Uma contribuicão ao auxiılio do diagnostico do autismo a partir do processamento de imagens para extraçao de medidas antropometricas. Revista de Informática Teórica e Aplicada: RITA. v. 23, p. 100-123, 2016.Qualis: C
42.	CERQUEIRA, C. C. S. ; RAMALLO, V. ; HÜNEMEIER, T. ; AZEVEDO, S. ; QUINTO-SANCHEZ, M. ; PASCHETTA, C. ; CINTAS, C. ; GONZALEZ, M. ; SCHULER-FACCINI, L. ; BORTOLINI, M. C. ; GONZALEZ-JOSE, R.. Predicting Physical Features and Diseases by DNA Analysis: Current Advances and Future Challenges. Journal of Forensic Research. v. 7, p. 336, 2016. Qualis: B4
43.	CHILE, T. ; GOUVEIA, G. R. ; BRENTANI, H. P. ; ALEXANDRINO-JUNIOR, C. ; RIBEIZ, S. R. I. ; BOTTINO, C. M. C.. Evaluation of 5HTTLPR and BDNF rs6265 polymorphisms in a Brazilian elderly population. 2016. Apresentação de Trabalho/Congresso
44.	CRUZ, C. H. B. ; SOUZA, G. M. ; CANTARELLA, H. ; VAN SLUYS, MARIE-ANNE ; FILHO, RUBENS MACIEL. Proalcool 40 anos. Universidades e empresas: 40 anos de ciência e tecnologia para o etanol brasileiro. 1 ed. Blucher, 2016. p. 223.
45.	CUEVAS, S. A. P. ; Da SILVA, F. L. B.. Refining the calibration of a coarse-grained force field for protein complexation. Em: XMeeting 2016 - 12th International Conference of the Brazilian Association of Bioinformatics and Computational Biology (AB3C), 2016, Belo Horizonte - MG. Book of abstracts, 2016.
46.	da Silva, Aline M. Composting as a source of new bacteria and thermostable enzymes viewed through metagenomics and metatranscriptomics. 2016. Apresentação de Trabalho/Conferência ou palestra
47.	da Silva, Fernando Luis Barroso. Palestra convidada: Desenvolvendo e aplicando métodos de simulação a pH constante (FFCLRP/USP). 2016. Apresentação de Trabalho/Conferência ou palestra
48.	DAMASIO, ANDRÉ RICARDO DE LIMA ; RUBIO, MARCELO VENTURA ; GONÇALVES, THIAGO AUGUSTO ; PERSINOTI, GABRIELA FELIX ; SEGATO, FERNANDO ; PRADE, ROLF ALEXANDER ; CONTESINI, FABIANO JARES ; De Souza, Amanda Pereira ; BUCKERIDGE, MARCOS SILVEIRA ; SQUINA, FABIO MARCIO. Xyloglucan breakdown by endo-xyloglucanase family 74 from Aspergillus fumigatus. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. v. 101, p. 2893-2903, 2016. Qualis: A2
49.	DE ALMEIDA, JOÃO PAULO PEREIRA ; GOMES-FILHO, JOSÉ VICENTE ; GUTIERREZ, J. M. ; ten-Caten, F ; LORENZETTI, ALAN P. R. ; Vencio, R. Z. N. ; KOIDE, T.. Massive deletions mediated by IS in megaplasmid PNRC200 of Halobacterium salinarum NRC-1. Em: Brazilian International Congress of Genetics, 2016, Caxambu. Brazilian International Congress of Genetics 2016, 2016.
50.	DE ARAÚJO LIMA, LEANDRO ; FEIO-DOS-SANTOS, ANA CECÍLIA ; BELANGERO, SINTIA IOLE ; GADELHA, ARY ; BRESSAN, RODRIGO AFFONSECA ; SALUM, GIOVANNI ABRAHÃO ; PAN, PEDRO MARIO ; MORIYAMA, TAIS SILVEIRA ; GRAEFF-MARTINS, ANA SOLEDADE ; TAMANAHA, ANA CARINA ; ALVARENGA, PEDRO ; KRIEGER, FERNANDA VALLE ; FLEITLICH-BILYK, BACY ; JACKOWSKI, ANDREA PAROLIN ; BRIETZKE, ELISA ; SATO, JOÃO RICARDO ; POLANCZYK, GUILHERME VANONI ; MARI, JAIR DE JESUS ; MANFRO, GISELE GUS ; HASHIMOTO, R. F. ; et.al. An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in Attention-Deficit/Hyperactivity Disorder. Scientific Reports. v. 6, p. 22851, 2016. Qualis: A2
51.	DE OLIVEIRA, GILBERTO SANTOS ; KAWAHARA, REBECA ; ROSA-FERNANDES, LIVIA ; AVILA, CARLA C. ; LARSEN, MARTIN R. ; PEREIRA ALVES, JOÃO MARCELO ; PALMISANO, GIUSEPPE. Novel DNA coding regions and protein arginylation reveal unexplored T. cruzi proteome and PTMs. INTERNATIONAL JOURNAL OF MASS SPECTROMETRY. v. 1, p. 1, 2016. Qualis: A3
52.	DE SOUZA, AMANDA P. ; ARENQUE, BRUNA C. ; Tavares, Eveline Q. P. ; Buckeridge, Marcos S.. Transcriptomics and Genetics Associated with Plant Responses to Elevated CO2 Atmospheric Concentrations. Plant Genomics and Climate Change. 1ed. Em: . : Springer New York. 2016.p. 67-83.
53.	DELBONI, Lariani Aparecida ; Barroso da Silva, Fernando Luís. On the complexation of whey proteins. Food Hydrocolloids. v. 55, p. 89-99, 2016. Qualis: A1
54.	DEOCESANO-PEREIRA, CARLOS ; AMARAL, MURILO S. ; PARREIRA, KLEBER S. ; AYUPE, ANA C. ; JACYSYN, JACQUELINE F. ; AMARANTE-MENDES, GUSTAVO P. ; Reis, Eduardo M. ; Verjovski-Almeida, Sergio. Long non-coding RNA INXS is a critical mediator of BCL-XS induced apoptosis. Nucleic Acids Research. v. 00, p. gkw713, 2016. Qualis: A1
55.	DOS SANTOS, A. P. ; GUIMARÃES, A. M. S. ; Biondo, Alexander W.. Micoplasmoses Hemotrópicas em Animais de Companhia. Em: Megid J; Ribeiro MG, Paes AC. (Org.). Doenças Infecciosas de Animais de Produção e Companhia. 1ed.Rio de Janeiro. : Guanabara Koogan. 2016.v. 1, p. 1063-1070.
56.	DRIEMEIER, CARLOS ; LING, LIU YI ; SANCHES, GUILHERME M. ; PONTES, ANGÉLICA O. ; MAGALHÃES, PAULO S. GRAZIANO ; Ferreira, João E.. A computational environment to support research in sugarcane agriculture. Computers and Electronics in Agriculture. v. 130, p. 13-19, 2016. Qualis: A1
57.	DURAN, N. M. ; SPELZINI, D. ; BOERIS, V. ; da Silva, Fernando Luis Barroso. Interaction of quinoa protein and carrageenan. Experiment and computational simulation. Em: FRONTIERS IN PHYSICAL SCIENCES, HUMBOLDT KOLLEG, 2016, Buenos Aires, Argentina. FRONTIERS IN PHYSICAL SCIENCES, HUMBOLDT KOLLEG, p. 40-40, 2016.
58.	EGAN, KIEREN J ; VON SCHANTZ, MALCOLM ; NEGRÃO, ANDRÉ B ; SANTOS, HADASSA C ; HORIMOTO, ANDRÉA R V R ; DUARTE, NUBIA E ; GONÇALVES, GUILHERME C ; SOLER, JÚLIA M P ; DE ANDRADE, MARIZA ; LORENZI-FILHO, GERALDO ; VALLADA, HOMERO ; TAPOROSKI, TÂMARA P ; PEDRAZZOLI, MARIO ; AZAMBUJA, ANA P ; DE OLIVEIRA, CAMILA M ; ALVIM, RAFAEL O ; KRIEGER, JOSÉ E ; PEREIRA, ALEXANDRE C. Cohort profile: the Baependi Heart Study-a family-based, highly admixed cohort study in a rural Brazilian town. BMJ Open. v. 6, p. e011598, 2016. Qualis: A1
59.	ELLEBEDY, ALI H ; JACKSON, KATHERINE J L ; KISSICK, HAYDN T ; Nakaya, Helder I ; DAVIS, CARL W ; ROSKIN, KRISHNA M ; MCELROY, ANITA K ; OSHANSKY, CHRISTINE M ; Elbein, Rivka ; THOMAS, SHINE ; LYON, GEORGE M ; SPIROPOULOU, CHRISTINA F ; Mehta, Aneesh K ; THOMAS, PAUL G ; BOYD, SCOTT D ; Ahmed, Rafi. Defining antigen-specific plasmablast and memory B cell subsets in human blood after viral infection or vaccination. Nature Immunology (Print). v. 1, p. 1, 2016. Qualis: A1
60.	FERREIRA, LUDMILA RODRIGUES PINTO ; FERREIRA, FREDERICO MORAES ; Nakaya, Helder Imoto ; DENG, XUTAO ; CÂNDIDO, DARLAN DA SILVA ; DE OLIVEIRA, LEA CAMPOS ; BILLAUD, JEAN-NOEL ; LANTERI, MARION C. ; RIGAUD, VAGNER OLIVEIRA-CARVALHO ; SEIELSTAD, MARK ; KALIL, JORGE ; FERNANDES, FABIO ; RIBEIRO, ANTÔNIO LUIZ P. ; SABINO, ESTER CERDEIRA ; CUNHA-NETO, EDECIO. Blood Gene Signatures of Chagas disease Cardiomyopathy with or without ventricular dysfunction. The Journal of Infectious Diseases. v. 1, p. jiw540, 2016. Qualis: A1
61.	FERREIRA, R. C. ; BONADIO, I. ; DURHAM, A. M.. Secretary Pattern: dereasing coupling while keeping reusability. Em: SugarLoafPlop '16, 2016. Qualis: Não identificado (SugarLoafPlop '16)
62.	FERREIRA, SAVIO SIQUEIRA ; HOTTA, CARLOS TAKESHI ; POELKING, VIVIANE GUZZO DE CARLI ; LEITE, DEBORA CHAVES COELHO ; BUCKERIDGE, MARCOS SILVEIRA ; LOUREIRO, MARCELO EHLERS ; BARBOSA, MARCIO HENRIQUE PEREIRA ; CARNEIRO, MONALISA SAMPAIO ; SOUZA, GLAUCIA MENDES. Co-expression network analysis reveals transcription factors associated to cell wall biosynthesis in sugarcane. Plant Molecular Biology. v. 91, p. 15-35, 2016. Qualis: A1
63.	FONSECA, M. ; RODRIGUES, A. C. ; CEZAR, L. ; FUJITA, A ; SORIANO, F. ; STEINER, A.. Spontaneous hypothermia in human sepsis is a transient, self-limiting and non-terminal response. Journal of Applied Physiology. v. 1, p. 1, 2016. Qualis: A2
64.	Fragoso, T. M. ; de Andrade, M. ; Pereira, A.C. ; Rosa, G. J. M. ; SOLER, J. M. P.. Bayesian variable selection in multilevel Item Response Theory models with application in genomics. Genetic Epidemiology (Print). 2016. Qualis: A3
65.	FRAGOSO, TIAGO M. ; DE ANDRADE, MARIZA ; PEREIRA, ALEXANDRE C. ; ROSA, GUILHERME J. M. ; SOLER, JÚLIA M. P.. Bayesian Variable Selection in Multilevel Item Response Theory Models with Application in Genomics. Genetic Epidemiology (Print). v. 40, p. 253-263, 2016. Qualis: A3
66.	FRANCA, G. S. ; VIBRANOVSKI, M. D. ; GALANTE, P. A. F.. Host gene constraints and genomic context impact the expression and evolution of human microRNAs. Nature Communications. v. 7, p. 11438, 2016. Qualis: A1
67.	FUJITA, A.; SEVERINO, P. ; ALEXANDRINO, P. ; OLIVEIRA, F. C. A. ; MIYANO, S.. Granger causality for time series gene expression data. Em: Ka-Chun Wong. (Org.). Computational Biology and Bioinformatics: Gene Regulation. 1ed. : CRC Press. 2016.v. 1, p. 48-65.
68.	Fujita, André; TAKAHASHI, DANIEL YASUMASA ; BALARDIN, JOANA BISOL ; VIDAL, MACIEL CALEBE ; SATO, João Ricardo. Correlation between graphs with an application to brain network analysis. Computational Statistics & Data Analysis (Print),. p. 76-92, 2016. Qualis: A2 (COMPUTATIONAL STATISTICS & DATA ANALYSIS)
69.	GALLETTI, MARIA FERNANDA B. M. ; Fujita, André ; ROSA, RAFAEL D. ; MARTINS, LARISSA A. ; SOARES, HERBERT S. ; LABRUNA, MARCELO B. ; DAFFRE, SIRLEI ; FOGAÇA, ANDRÉA C.. Virulence genes of Rickettsia rickettsii are differentially modulated by either temperature upshift or blood-feeding in tick midgut and salivary glands. Parasites & Vectors. v. 9, p. 331, 2016. Qualis: A1
70.	GARRIDO, LEANDRO MAZA ; ALVES, JOÃO MARCELO PEREIRA ; OLIVEIRA, LILIANE SANTANA ; GRUBER, ARTHUR ; PADILLA, GABRIEL ; ARAÚJO, WELINGTON LUIZ. Draft Genome Sequence of Curtobacterium sp. Strain ER1/6, an Endophytic Strain Isolated from Citrus sinensis with Potential To Be Used as a Biocontrol Agent. Genome Announcements. v. 4, p. e01264-16, 2016. Qualis: B3
71.	GOMES, LUCIANA R. ; VESSONI, ALEXANDRE T. ; Menck, Carlos F.M.. Microenvironment and autophagy cross-talk: Implications in cancer therapy. Pharmacological Research. v. 107, p. 300-307, 2016. Qualis: A1
72.	GOMES-FILHO, JOSÉ VICENTE ; ZARAMELA, LIVIA S. ; Italiani, VCS ; BALIGA, NITIN S. ; Vencio, R. Z. N. ; KOIDE, T.. Sense overlapping transcripts in IS1341-type transposases genes are functional non-coding RNA in archaea. Em: International Congress on transposable elements, 2016, Saint Malo. International Congress on transposable elements, 2016.
73.	GUARISCHI-SOUSA, RODRIGO ; PUIGVERT, MARINA ; COLL, NÚRIA S. ; SIRI, MARÍA INÉS ; PIANZZOLA, MARÍA JULIA ; VALLS, MARC ; Setubal, João C.. Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031. Standards in Genomic Sciences. v. 11, p. 7, 2016. Qualis: B2
74.	GUIMARÃES, A. M. S.; DOS SANTOS, ANDREA P. ; Biondo, Alexander W.. Micoplasmoses Hemotrópicas em Animais de Produçao. Em: Megid J; Ribeiro MG, Paes AC. (Org.). Doenças Infecciosas de Animais de Produção e Companhia. 1ed.Rio de Janeiro. : Guanabara Koogan. 2016.v. 1, p. 1070-1079.
75.	IM, SE JIN ; HASHIMOTO, MASAO ; GERNER, MICHAEL Y. ; LEE, JUNGHWA ; KISSICK, HAYDN T. ; BURGER, MATHEUS C. ; SHAN, QIANG ; HALE, J. SCOTT ; LEE, JUDONG ; NASTI, TAHSEEN H. ; SHARPE, ARLENE H. ; FREEMAN, GORDON J. ; GERMAIN, RONALD N. ; Nakaya, Helder I. ; XUE, HAI-HUI ; Ahmed, Rafi. Defining CD8+ T cells that provide the proliferative burst after PD-1 therapy. Nature (London). v. 1, p. 1, 2016. Qualis: A1
76.	Ishivatari, Luis Henrique U. ; OLIVEIRA, LARIZA L. DE ; SILVA, FERNANDO L. B. DA ; TINÓS, RENATO. Algoritmos Genéticos Com Função De Avaliação Dinâmica Para O Problema De Predição De Estruturas De Proteínas. Em: 10. Congresso Brasileiro de Inteligência Computacional, p. 1, 2016. Qualis: Não identificado (10. Congresso Brasileiro de Inteligência Computacional)
77.	Kasturi, Sudhir Pai ; KOZLOWSKI, PAMELA A. ; Nakaya, Helder I ; BURGER, MATHEUS C. ; RUSSO, PEDRO ; PHAM, MATHEW ; KOVALENKOV, YEVGENIY ; SILVEIRA, EDUARDO L. V. ; HAVENAR-DAUGHTON, COLIN ; BURTON, SAMANTHA L. ; KILGORE, KATIE M. ; JOHNSON, MATHEW J. ; NABI, RAFIQ ; LEGERE, TRACI ; SHER, ZARPHEEN JINNAH ; CHEN, XUEMIN ; AMARA, RAMA R. ; HUNTER, ERIC ; BOSINGER, STEVEN E. ; SPEARMAN, PAUL ; et.al. Adjuvanting an SIV vaccine with TLR ligands encapsulated in nanoparticles induces persistent antibody responses and enhanced protection in TRIM5α restrictive macaques. Journal of Virology (Print). v. 1, p. JVI.01844-16, 2016. Qualis: A1
78.	KINKER, GABRIELA SARTI ; THOMAS, ANDREW MALTEZ ; CARVALHO, VINICIUS JARDIM ; LIMA, FELIPE PRATA ; Fujita, André. Deletion and low expression of NFKBIA are associated with poor prognosis in lower-grade glioma patients. Scientific Reports. v. 6, p. 24160, 2016. Qualis: A2
79.	KLINE, KEITH L. ; MSANGI, SIWA ; DALE, VIRGINIA H. ; WOODS, JEREMY ; SOUZA, GLAUCIA M. ; OSSEWEIJER, PATRICIA ; CLANCY, JOY S. ; HILBERT, JORGE A. ; JOHNSON, FRANCIS X. ; MCDONNELL, PATRICK C. ; MUGERA, HARRIET K.. Reconciling food security and bioenergy: priorities for action. Global Change Biology. Bioenergy. v. xx, p. xx, 2016. Qualis: Não identificado (BIOENERGY)
80.	LATARULLO, MARIANA B. G. ; Tavares, Eveline Q. P. ; MALDONADO, GABRIEL P. ; LEITE, DÉBORA C. C. ; Buckeridge, Marcos S.. Pectins, Endopolygalacturonases, and Bioenergy. Frontiers in Plant Science. v. 7, p. 1401, 2016. Qualis: A1
81.	LIMA, W. R. ; TESSARIN-ALMEIDA, G. ; ROZANSKI, A. ; PARREIRA, K. S. ; MORAES, M. S. ; MARTINS, D. C. ; HASHIMOTO, R. F. ; GALANTE, P. A. F. ; GARCIA, C. R. S.. Signaling transcript profile of the asexual intraerythrocytic development cycle of Plasmodium falciparum induced by melatonin and cAMP. Genes & Cancer. v. 7, p. 323-339, 2016.Qualis: Não identificado (GENES & CANCER)
82.	LIMA-JUNIOR, JAMES DALTRO ; VIANA-NIERO, CRISTINA ; CONDE OLIVEIRA, DANIEL V. ; MACHADO, GABRIEL ESQUITINI ; RABELLO, MICHELLE CRISTIANE DA SILVA ; MARTINS-JUNIOR, JOAQUIM ; MARTINS, LAYLA FARAGE ; DIGIAMPIETRI, LUCIANO ANTONIO ; DA SILVA, ALINE MARIA ; SETUBAL, JOÃO CARLOS ; RUSSELL, DANIEL A. ; JACOBS-SERA, DEBORAH ; POPE, WELKIN H. ; HATFULL, GRAHAM F. ; LEÃO, SYLVIA CARDOSO. Characterization of mycobacteria and mycobacteriophages isolated from compost at the São Paulo Zoo Park Foundation in Brazil and creation of the new mycobacteriophage Cluster U. BMC Microbiology (Online). v. 16, p. 1-15, 2016. Qualis: A2
83.	LIRA, BRUNO SILVESTRE ; ROSADO, DANIELE ; ALMEIDA, JULIANA ; De Souza, Amanda Pereira ; BUCKERIDGE, M. S. ; PURGATTO, EDUARDO ; GUYER, LUZIA ; HÖRTENSTEINER, STEFAN ; FRESCHI, LUCIANO ; ROSSI, MAGDALENA. Pheophytinase Knockdown Impacts Carbon Metabolism and Nutraceutical Content Under Normal Growth Conditions in Tomato. Plant and Cell Physiology. v. 57, p. 642-653, 2016. Qualis: A1
84.	LISBOA, B. C. G. ; OLIVEIRA, K. ; LIMA, L. ; PUGA, R. ; TAHIRA, A. C. ; FARFEL, J. M. ; REBUSTINI, R. F. ; MIGUEL, E. C. ; HOEXTER, M. ; PEREIRA, C. A. B. ; BRENTANI, H.. Transcriptome Study of Obsessive Compulsive Disorders (postmortem study). 2016. Apresentação de Trabalho/Outra
85.	LOPES, R. J. ; FRANCA, G. S. ; GALANTE, P. A. F. ; VIBRANOVSKI, M. D.. Novos truques de velhos genes. Folha de Sao Paulo, 08 maio 2016.
86.	LORENZETTI, ALAN P. R. ; GOMES-FILHO, JOSÉ VICENTE ; ZARAMELA, LIVIA S. ; ten-Caten, F ; Vencio, R. Z. N. ; KOIDE, T.. Lsm bound antisense RNAs play a role in Halobacterium salinarum transposition regulation. Em: X meeting 2016, 2016, Belo Horizonte. X meeting 2016 - 12th conference of AB3C, 2016.
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89.	MARTINS, MARIA THEREZA BAZZO ; DE SOUZA, WAGNER RODRIGO ; DA CUNHA, BÁRBARA ANDRADE DIAS BRITO ; BASSO, MARCOS FERNANDO ; DE OLIVEIRA, NELSON GERALDO ; VINECKY, FELIPE ; MARTINS, POLYANA KELLY ; DE OLIVEIRA, PATRÍCIA ABRÃO ; ARENQUE-MUSA, BRUNA CERSÓZIMO ; De Souza, Amanda Pereira ; BUCKERIDGE, MARCOS SILVEIRA ; KOBAYASHI, ADILSON KENJI ; QUIRINO, BETANIA FERRAZ ; MOLINARI, HUGO BRUNO CORREA. Characterization of sugarcane (Saccharum spp.) leaf senescence: implications for biofuel production. Biotechnology for Biofuels. v. 9, p. 153-170, 2016. Qualis: A1
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98.	NAKAYA, H. I. (CEIRS Network@Emory University)Palestra:'Systems Analysis of Immunity to Influenza Vaccination Across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures'. 2016. Apresentação de Trabalho/Seminário
99.	NAKAYA, H. I. (University of Tokyo) Palestra: Systems Immunology: Using an Holistic Approach to Understand the Molecular Mechanisms of Immunity. 2016. Apresentação de Trabalho/Seminário
100.	NAKAYA, H. I. (Departamento de Biologia celular e do Desenvolvimento do ICB/USP) Palestra: Imunologia de Sistemas. 2016. Apresentação de Trabalho/Seminário
101.	NAKAYA, H. I. (Workshop Medicina Translacional@ICB/USP) Palestra: Systems Biology of Inflammatory Processes. 2016. Apresentação de Trabalho/Simpósio
102.	NAKAYA, H. I. (VSV-EBOVAC Annual Meeting@Viena, Austria) Palestra: Scientific Advisory Board Feedback. 2016. Apresentação de Trabalho/Simpósio
103.	NAKAYA, H. I. (2nd ALTANT@Holanda) Palestrante convidado. 2016. Apresentação de Trabalho/Conferência ou palestra
104.	NAKAYA, H. I. (45a Reunião Anual da SBBq@Natal) Palestrante convidado da sessão 'Systems Biology and Biomarkers for Human Disorders'. 2016. Apresentação de Trabalho/Congresso
105.	NAKAYA, H. I. (Instituto do Cérebro@Rio de Janeiro) Palestra como convidado do prof. Vivaldo Moura Neto. 2016. Apresentação de Trabalho/Seminário
106.	NAKAYA, H. I. (XII Workshop de Imunologia@Ribeirão Preto) Palestrante convidado. 2016. Apresentação de Trabalho/Conferência ou palestra
107.	NAKAYA, H. I. (III Curso de Inverno em Fisiopatologia e Análises Clínicas@FCF) Palestra: ?BIOINFORMÁTICA APLICADA ÀS CIÊNCIAS DA SAÚDE?. 2016. Apresentação de Trabalho/Seminário
108.	NAKAYA, H. I. (Hospital Universitário@USP) Palestra para seminários internos. 2016. Apresentação de Trabalho/Seminário
109.	NAKAYA, H. I. (XXXIII Congresso Brasileiro de Reumatologia@Brasilia) Palestrante convidado. 2016. Apresentação de Trabalho/Congresso
110.	NAKAYA, H. I. (Beyond Zika@USP) Palestrante e organizador. 2016. Apresentação de Trabalho/Simpósio
111.	NAKAYA, H. I. (Seminar Series in the Department of Biochemistry@IQ-USP) Palestrante convidado. 2016. Apresentação de Trabalho/Seminário
112.	NAKAYA, HELDER I. (Seminário sobre Pesquisas em Biologia Celular, SPBCel @ UNIFESP) Palestrante convidado. 2016. Apresentação de Trabalho/Seminário
113.	NAKAYA, HELDER I. (Seminário para PROPESQ @ PUCRS) Palestra: Systems Immunology: Assessing the Mechanisms of Infection and Vaccination. 2016. Apresentação de Trabalho/Seminário
114.	NAKAYA, HELDER I. (Seminário para PROPESQ @ PUCRS) Palestra: Marketing para cientistas: da bancada a concursos e além. 2016. Apresentação de Trabalho/Seminário
115.	NAKAYA, HELDER I. (Zika meeting: one year after one year @ FioCruz-RJ) Palestrante convidado. 2016. Apresentação de Trabalho/Simpósio
116.	NAKAYA, HELDER I. (Seminários do Departamento de Farmacologia @ ICB-USP) Palestrante convidado. 2016. Apresentação de Trabalho/Seminário
117.	NAKAYA, HELDER I. (Seminários do Departamento de Parasitologia @ ICB-USP) Palestrante convidado. 2016. Apresentação de Trabalho/Seminário
118.	NAKAYA, HELDER I. (2o Simpósio do PPG em Patologia Molecular @ UNB) Palestrante convidado. 2016. Apresentação de Trabalho/Simpósio
119.	NAKAYA, HELDER I. (II Simposio Internacional em Epidemiologia Cardiovascular @ FMUSP) Palestrante convidado. 2016. Apresentação de Trabalho/Simpósio
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130.	RAICES, J. ; OTTO, P. A. ; M.D. Vibranovski. Gene expression throughout spermatogenesis:what new genes can tell us. Em: Evolution, 2016, Austin. Evolution, 2016.
131.	Ravindran, Rajesh ; LOEBBERMANN, JENS ; Nakaya, Helder I. ; Khan, Nooruddin ; MA, HUALING ; GAMA, LEONARDO ; MACHIAH, DEEPA K. ; LAWSON, BENTON ; HAKIMPOUR, PAUL ; WANG, YI-CHONG ; Li, Shuzhao ; SHARMA, PRACHI ; KAUFMAN, RANDAL J. ; MARTINEZ, JENNIFER ; Pulendran, Bali. The amino acid sensor GCN2 controls gut inflammation by inhibiting inflammasome activation. Nature (London). v. 531, p. 523-527, 2016. Qualis: A1
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133.	RIBEIRO REILY ROCHA, CLARISSA ; SATORU KAJITANI, GUSTAVO ; QUINET, ANNABEL ; SOARES FORTUNATO, RODRIGO ; FREDERICO MARTINS MENCK, CARLOS. NRF2 and glutathione are key resistance mediators to temozolomide in glioma and melanoma cells. OncoTarget. v. 07, p. 48081-48092, 2016. Qualis: A2
134.	Ribeiro, Adèle H. ; SOLER, JÚLIA M. P. ; Neto, Elias Chaibub ; Fujita, André. Causal Inference and Structure Learning of Genotype¿Phenotype Networks Using Genetic Variation. Big Data Analytics in Genomics. 1ed. Em: . : Springer International Publishing. 2016.p. 89-143.
135.	Sabino, Ester C. ; LOUREIRO, PAULA ; LOPES, MARIA ESTHER ; Capuani, Ligia ; MCCLURE, CHRISTOPHER ; CHOWDHURY, DHULY ; DI-LORENZO-OLIVEIRA, CLAUDIA ; OLIVEIRA, LEA C. ; LINNEN, JEFFREY M. ; LEE, TZONG-HAE ; GONÇALEZ, THELMA ; BRAMBILLA, DONALD ; KLEINMAN, STEVE ; Busch, Michael P. ; CUSTER, BRIAN. Transfusion-Transmitted Dengue and Associated Clinical Symptoms During the 2012 Epidemic in Brazil. JOURNAL OF INFECTIOUS DISEASES. v. 213, p. 694-702, 2016. Qualis: A1 (THE JOURNAL OF INFECTIOUS DISEASES)
136.	SALATINO, ANTONIO ; BUCKERIDGE, MARCOS. 'Mas de que te serve saber botânica?'. Estudos Avançados (Online). v. 30, p. 177-196, 2016. Qualis: A1
137.	SALAZAR, MARCELA MENDES ; GRANDIS, ADRIANA ; PATTATHIL, SIVAKUMAR ; NETO, JORGE LEPIKSON ; CAMARGO, EDUARDO LEAL OLIVEIRA ; ALVES, ANA ; RODRIGUES, JOSÉ CARLOS ; SQUINA F. M. ; CAIRO, JOÃO PAULO FRANCO ; BUCKERIDGE, M. S. ; HAHN, MICHAEL G. ; PEREIRA, GONÇALO AMARANTE GUIMARÃES. Eucalyptus Cell Wall Architecture: Clues for Lignocellulosic Biomass Deconstruction. BioEnergy Research. v. X, p. X, 2016. Qualis: A1
138.	SANTOS, S. S. ; TAKAHASHI, D. Y. ; SATO, J. R. ; FERREIRA, Carlos Eduardo ; FUJITA, A.. Statistical methods in graphs: parameter estimation, model selection, and test. Em: Matthias Dehmer; Frank Emmert-Streib; Zengqiang Chen; Xueliang Li; and Yongtang Shi. (Org.). Mathematical foundations and applications of graph entropy. 1ed. : Wiley-VCH. 2016.v. 6, p. 183-202.
139.	SATO, J. R. ; BALARDIN, J. ; VIDAL, M. C. ; FUJITA, A. Identification of segregated regions in the functional brain connectome of autistic patients by a combination of fuzzy spectral clustering and entropy analysis. Journal of Psychiatry & Neuroscience. v. 41, p. 124-132, 2016. Qualis: A1 (JOURNAL OF PSYCHIATRY AND NEUROSCIENCE)
140.	SCHAKER, PATRICIA D. C. ; PALHARES, A. C. ; TANIGUTI, LUCAS M. ; PETERS, LEILA P. ; CRESTE, SILVANA ; AITKEN, KAREN S. ; SLUYS MAV. ; KITAJIMA, JOÃO P. ; VIEIRA, MARIA L. C. ; MONTEIRO-VITORELLO, CLAUDIA B.. RNAseq Transcriptional Profiling following Whip Development in Sugarcane Smut Disease. Plos One. v. 11, p. e0162237, 2016. Qualis: A1
141.	SCHONS-FONSECA, LUCIANE ; DA SILVA, JOSEFA B. ; MILANEZ, JULIANA S. ; DOMINGOS, RENAN H. ; SMITH, JANET L. ; Nakaya, Helder I. ; GROSSMAN, ALAN D. ; HO, PAULO L. ; DA COSTA, RENATA MA. Analysis of LexA binding sites and transcriptomics in response to genotoxic stress in. Nucleic Acids Research. v. 1, p. gkv1536, 2016. Qualis: A1
142.	SCHRODER, WAYNE A. ; ANRAKU, ITARU ; LE, THUY T. ; HIRATA, THIAGO D.C. ; Nakaya, Helder I. ; Major, Lee ; ELLIS, JONATHAN J. ; Suhrbier, Andreas. SerpinB2 Deficiency Results in a Stratum Corneum Defect and Increased Sensitivity to Topically Applied Inflammatory Agents. The American Journal of Pathology (Print). v. 1, p. 1, 2016. Qualis: A1
143.	Setubal, Joao C. Desconcertos na Ciência. Revista Brasileira de Psicanálise (Impresso). v. 50, p. 145-152, 2016.Qualis: B1
144.	SILVA, DENNIS J. ; ALVES, WONDER A. L. ; MORIMITSU, ALEXANDRE ; HASHIMOTO, RONALDO F.. Efficient incremental computation of attributes based on locally countable patterns in component trees. Em: 2016 IEEE International Conference on Image Processing (ICIP), p. 3738-3742, 2016. Qualis: Não identificado (2016 IEEE International Conference on Image Processing (ICIP))
145.	SILVA, G. M. ; GIULIATTI, S. Virtual Screening of Oncoprotein E6 from Human Papillomavirus and Rational Ligand Design. Em: VI Workshop do Programa de Pós-Graduação em Genética da FMRP-USP, 2016, Ribeirão Preto, SP. Resumos, v. 1, p. 1-1, 2016.
146.	SILVA, P. V. S. ; GIULIATTI, S. Estudo In Sílico das Ômicas Relacionadas à Proteína Perilipina 1 (PLIN1). Em: 68ª Reunião Anual da SBPC, 2016, Porto Seguro, BA. Resumos de Comunicações Livres. São Paulo, SP: SBPC, v. 1, p. 1-1, 2016.
147.	SILVA, P. V. S. ; GIULIATTI, S. Estudo In Sílico das Ômicas Relacionadas à Proteína Perilipina 1. Em: XXIV Jornadas Jóvenes Investigadores (AUGM), 2016, São Pedro, SP. Resumos, v. 1, p. 1-1, 2016.
148.	SOCHACKI, JAROSLAW ; DEVALLE, SYLVIE ; REIS, MARCELO ; DE MORAES MACIEL, RENATA ; DA SILVEIRA PAULSEN, BRUNA ; BRENTANI, HELENA ; BELMONTE-DE-ABREU, PAULO SILVA ; REHEN, STEVENS. Generation of iPS cell lines from schizophrenia patients using a non-integrative method. Stem Cell Research. v. 17, p. 97-101, 2016. Qualis: A2
149.	SOSA, O. J. ; PAIXAO, V. F. ; SETUBAL, João C ; Reis, Eduardo M ; REIS, EM. Bioinformatic analysis of RNASeq data to search for novel diagnostic/prognostic biomarkers of pancreatic ductal adenocarcinoma. Em: AACR Annual Metting, 2016, New Orleans. AACR Annual Meeting 2016 abstract book, p. 16A5770AACR, 2016.
150.	SOUZA, GM. Sugarcane Genome Sequencing Initiative. 2016. Apresentação de Trabalho/Conferência ou palestra
151.	SOUZA, GM. Bioenergy 2030: a steep ramp up for the climate secure sustainable future we want. 2016. Apresentação de Trabalho/Conferência ou palestra
152.	SOUZA, GM. Exploring gene expression of the sugarcane genome in all its multiple copies: genome sequence and analysis of an energy crop. 2016. Apresentação de Trabalho/Congresso
153.	SOUZA, GM. Bioenergy Research. 2016. Apresentação de Trabalho/Conferência ou palestra
154.	SOUZA, GM. Bioenergy & Sustainability. 2016. Apresentação de Trabalho/Conferência ou palestra
155.	SOUZA, GM. A sustentabilidade da bioenergia. 2016. Apresentação de Trabalho/Conferência ou palestra
156.	SOUZA, GM. A pesquisa da bioenergia. 2016. Apresentação de Trabalho/Conferência ou palestra
157.	SOUZA, GM. A pesquisa em bioenergia. 2016. Apresentação de Trabalho/Conferência ou palestra
158.	SOUZA, J. B. O. ; ANTONIO JUNIOR, J. E. ; TAMAROZZI, E. R. ; GIULIATTI, S. In silico Intrinsic Disorder Analysis of Β-crystallin B2 Protein and Mutations that Cause Congenital Cataract. Em: X-meeting 2016 and 12th Annual AB3C Conference, 2016, Belo Horizonte, MG. Abstracts, v. 1, p. 1-1, 2016.
159.	SPINDOLA, L. ; PAN, P. ; MORETTI, P. ; OTA, V. ; SANTORO, M. ; COGO-MOREIRA, H. ; GADELHA, A. ; SALUM, G. A. ; MANFRO, G. G. ; MARI, J. J. ; BRENTANI, H. ; GRASSI-OLIVEIRA, R. ; BRIETZKE, E. ; MIGUEL, E. C. ; ROHDE, L. A. ; SATO, J. ; BRESSAN, R. A. ; BELANGERO, S.. Gene expression in blood of children and Adolescents: influence of environmental stressors on Major Depressive Disorder. Em: XXIV World Congress of Psychiatric Genetics (WCPG), 2016, Jerusalem. European Neuropsychopharmacology, p. 31-31, 2016.
160.	TAHIRA, A. C. ; LISBOA, B. ; REIS, V. N. ; SANTOS, A. C. F. ; BRENTANI, H.. Could SRY/SOX3 proteins regulation be a clue to sex biased in ASD?. 2016. Apresentação de Trabalho/Outra
161.	TAMAROZZI, E. R. ; ARNS, T. C. ; GIULIATTI, S. In silico Analysis of the Structural Characteristics of E6 Oncoprotein and European Variants of High-Risk HPV Type 16. Em: VIII Escola de Modelagem Molecular em Sistemas Biológicos, 2016, Petrópolis, RJ. Livro de Resumos, v. 1, p. 38-38, 2016.
162.	TAMAROZZI, E. R. ; SILVA, G. M. ; GIULIATTI, S. In silico Binding Site Analysis of E6 Oncoproteins from High-Risk European HPV Variants. Em: X-meeting 2016 and 12th Annual AB3C Conference, 2016, Belo Horizonte, MG. Abstracts, v. 1, p. 1-1, 2016.
163.	TAMAROZZI, E. R. ; SILVA, G. M. ; GIULIATTI, S. In silico Binding Site Analysis of E6 Oncoproteins from High-Risk European HPV Variants. Em: VI Workshop do Programa de Pós-Graduação em Genética da FMRP-USP, 2016, Ribeirão Preto, SP. Resumos, v. 1, p. 1-1, 2016.
164.	TEIXEIRA, F. R. ; RANDLE, S. J. ; PATEL, S. P. ; MEVISSEN, T. E. T. ; ZENKEVICIUTE, G. ; KOIDE, T. ; KOMANDER, D. ; LAMAN, H.. Gsk3 and Tomm20 are substrates of the SCFFbxo7/PARK15 ubiquitin ligase associated with Parkinson's disease. Biochemical Journal. v. 473, p. 3563-3580, 2016. Qualis: A2
165.	THOMAS, ANDREW M. ; JESUS, ELIANE C. ; LOPES, ADEMAR ; AGUIAR, SAMUEL ; BEGNAMI, MARIA D. ; ROCHA, RAFAEL M. ; CARPINETTI, PAOLA AVELAR ; CAMARGO, ANAMARIA A. ; HOFFMANN, CHRISTIAN ; FREITAS, HELANO C. ; SILVA, ISRAEL T. ; Nunes, Diana N. ; Setubal, João C. ; DIAS-NETO, Emmanuel. Tissue-Associated Bacterial Alterations in Rectal Carcinoma Patients Revealed by 16S rRNA Community Profiling. Frontiers in Cellular and Infection Microbiology. v. 6, p. 00179, 2016. Qualis: A1
166.	Van Sluys, M. A. O olhar de McClintock sobre o vivo. 2016. Apresentação de Trabalho/Conferência ou palestra
167.	Van Sluys, M. A.; CRUZ, C. H. B.. Science and Technology in the State of Sao Paulo. 2016. Apresentação de Trabalho/Conferência ou palestra
168.	Van Sluys, M. A.; CRUZ, C. H. B.. FAPESP e o financiamento à pesquisa no Estado de São Paulo. 2016. Apresentação de Trabalho/Conferência ou palestra
169.	Van Sluys, Marie Anne. Viagem pelo mundo da genômica. Revista PESQUISA, Sao Paulo, p. 94-94, 01 jul. 2016.
170.	Van Sluys, Marie Anne. Funding Agency Panel Sao Paulo Research Foundation FAPESP. 2016. Apresentação de Trabalho/Simpósio
171.	Van Sluys, Marie Anne; MALUF, D. Q. ; JESUS, Erika Maria de ; HERNANDES, J. ; SCHIAVO-MUCHE, A. P.. Tnt1 retrotransposon and ethylene mediates tobacco defense responses. 2016. Apresentação de Trabalho/Conferência ou palestra
172.	VANINA ELIAS, ELIANA ; PEREIRA DE CASTRO, NADIA ; HENRIQUE BALDAN PINEDA, PAULO ; SENS ABUÁZAR, CAROLINA ; APARECIDA BUENO DE TOLEDO OSORIO, CYNTHIA ; GIGLIOLA PINILLA, MABEL ; DANIELA DA SILVA, SABRINA ; ARANHA CAMARGO, ANAMARIA ; ARAUJO SILVA JR, WILSON ; NAPOLITANO E FERREIRA, ELISA ; PAULA BRENTANI, HELENA ; MARIA CARRARO, DIRCE. Epithelial cells captured from ductal carcinoma in situ reveal a gene expression signature associated with progression to invasive breast cancer. OncoTarget. v. 7, p. 75672-75684, 2016. Qualis: A2
173.	Vibranovski, M.D.; LONG, M.. Gene Origin, Sex Chromosomes and. Em: Richard M Kliman. (Org.). Encyclopedia of Evolutionary Biology. 1ed. : Elsevier. 2016.v. 2, p. 117-126.
174.	VIEIRA GERALDO, MURILO ; IMOTO NAKAYA, HELDER ; TERUKO KIMURA, EDNA. Down-regulation of 14q32-encoded miRNAs and tumor suppressor role for miR-654-3p in papillary thyroid cancer. OncoTarget. v. 1, p. 1-10, 2016. Qualis: A2
175.	VIEIRA, T. S. W. J. ; Vieira, Rafael F.C. ; KRAWCZAK, F. S. ; SOARES, H. S. ; GUIMARÃES, A. M. S. ; BARROS-FILHO, I. R. ; MARCONDES, M. ; LABRUNA, M. B. ; BIONDO, A. W.. Ehrlichia sp. infection in carthorses of low-income owners, Southern Brazil. Comparative Immunology, Microbiology and Infectious Diseases. v. 48, p. 1-5, 2016.Qualis: A1 (COMPARATIVE IMMUNOLOGY, MICROBIOLOGY AND INFECTIOUS DISEASES)
176.	VILLELA, DARINE ; RAMALHO, RODRIGO F. ; SILVA, ADERBAL R. T. ; BRENTANI, HELENA ; SUEMOTO, CLAUDIA K. ; PASQUALUCCI, CARLOS AUGUSTO ; GRINBERG, LEA T. ; KREPISCHI, ANA C. V. ; Rosenberg, Carla. Differential DNA Methylation of MicroRNA Genes in Temporal Cortex from Alzheimer?s Disease Individuals. Neural Plasticity (Online). v. 2016, p. 1-10, 2016. Qualis: A2
177.	VITCOSQUE, GABRIELA LEAL ; RIBEIRO, LILIANE FRAGA COSTA ; DE LUCAS, ROSYMAR COUTINHO ; DA SILVA, TONY MARCIO ; RIBEIRO, LUCAS FERREIRA ; DE LIMA DAMASIO, ANDRÉ RICARDO ; FARINAS, CRISTIANE SANCHEZ ; GONÇALVES, ALINE ZORZETTO LOPES ; SEGATO, FERNANDO ; BUCKERIDGE, MARCOS SILVEIRA ; JORGE, JOÃO ATILIO ; Polizeli, Maria de Lourdes T. M.. The functional properties of a xyloglucanase (GH12) of Aspergillus terreus expressed in Aspergillus nidulans may increase performance of biomass degradation. Applied Microbiology and Biotechnology. v. 100, p. 9133-9144, 2016. Qualis: A2
178.	YUNUSOV, D. ; ANDERSON, L. ; SILVA, L. F. ; WYSOCKA, J. ; EZASHI, T. ; ROBERTS, R. M. ; Verjovski-Almeida, S.. HIPSTR and thousands of lncRNAs are heterogeneously expressed in human embryos, primordial germ cells and stable cell lines. Scientific Reports. v. 6, p. 32753, 2016. Qualis: A2

(*) Relatório criado com produções desde 2000 até 2025
Data de processamento: 27/01/2026 13:30:34

228.	VASQUEZ, F. J. A. ; CASTILLO, W. O. ; GIULIATTI, S.. Explorando o Papel dos lncRNAs na Doença de Alzheimer. Em: XXXII Congresso Brasileiro de Genética Médica (CBGM 2021), 2021, Evento Online. Anais. Porto Alegre, RS: SBGM, v. XXXII, p. 1-1, 2021.
229.	VIANELLO, ELEONORA ; GONZALEZ-DIAS, PATRICIA ; VAN VEEN, SUZANNE ; ENGELE, CARMEN G ; QUINTEN, EDWIN ; MONATH, THOMAS P ; MEDAGLINI, DONATA ; SANTORO, FRANCESCO ; HUTTNER, ANGELA ; DUBEY, SHERI ; EICHBERG, MICHAEL ; NDUNGU, FRANCIS M ; KREMSNER, PETER G ; ESSONE, PAULIN N ; AGNANDJI, SELIDJI TODAGBE ; SIEGRIST, CLAIRE-ANNE ; Nakaya, Helder I ; OTTENHOFF, TOM H M ; HAKS, MARIËLLE C ; AGNANDIJ, SELIDIJ T ; et.al. Transcriptomic signatures induced by the Ebola virus vaccine rVSV-G-ZEBOV-GP in adult cohorts in Europe, Africa, and North America: a molecular biomarker study. Lancet Microbe. v. 1, p. 1, 2021. Qualis: Não identificado (LANCET MICROBE)
230.	VIBRANOVSKI, M. D. Male germline and the evolution of new genes. 2021. Apresentação de Trabalho/Conferência ou palestra
231.	VIBRANOVSKI, M. D. Evolution of Drosophila Sex Chromosome Expression in Spermatogenesis. 2021. Apresentação de Trabalho/Conferência ou palestra
232.	VIDEIRA, ALEXANDRE ; BECKEDORFF, FELIPE C. ; DASILVA, LUCAS F. ; Verjovski-Almeida, Sergio. PVT1 signals an androgen-dependent transcriptional repression program in prostate cancer cells and a set of the repressed genes predicts high-risk tumors. Cell Communication and Signaling. v. 19, p. 5, 2021. Qualis: A2
233.	VIEIRA, LUCAS MACIEL ; JORGE, NATASHA ANDRESSA NOGUEIRA ; DE SOUSA, JOÃO BATISTA ; SETUBAL, JOÃO CARLOS ; Stadler, Peter F. ; WALTER, MARIA EMÍLIA MACHADO TELLES. Competing Endogenous RNA in Colorectal Cancer: An Analysis for Colon, Rectum, and Rectosigmoid Junction. FRONTIERS IN ONCOLOGY. v. 11, p. 1670, 2021. Qualis: A2
234.	VIEIRA, PLINIO S. ; BONFIM, ISABELA M. ; ARAUJO, EVANDRO A. ; MELO, RICARDO R. ; LIMA, AUGUSTO R. ; FESSEL, MELISSA R. ; PAIXÃO, DOUGLAS A. A. ; PERSINOTI, GABRIELA F. ; ROCCO, SILVANA A. ; LIMA, TATIANI B. ; PIROLLA, RENAN A. S. ; MORAIS, MARIANA A. B. ; CORREA, JESSICA B. L. ; ZANPHORLIN, LETICIA M. ; DIOGO, JOSE A. ; LIMA, EVANDRO A. ; GRANDIS, Adriana ; Buckeridge, Marcos S. ; GOZZO, FABIO C. ; BENEDETTI, CELSO E. ; et.al. Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors. Nature Communications. v. 12, p. 4049, 2021. Qualis: A1
235.	WIJMA, MARYKE ; LEMBKE, CAROLINA GIMILIANI ; DINIZ, AUGUSTO LIMA ; SANTINI, LUCIANE ; ZAMBOTTI-VILLELA, LEONARDO ; COLEPICOLO, PIO ; Carneiro, Monalisa Sampaio ; SOUZA, GLAUCIA MENDES. Planting Season Impacts Sugarcane Stem Development, Secondary Metabolite Levels, and Natural Antisense Transcription. Cells. v. 10, p. 3451, 2021. Qualis: A1
236.	XIA, SHENGQIAN ; VANKUREN, NICHOLAS W. ; CHEN, CHUNYAN ; ZHANG, LI ; KEMKEMER, CLAUSE ; SHAO, YI ; JIA, HANGXING ; LEE, UNJIN ; ADVANI, ALEXANDER S. ; GSCHWEND, ANDREA ; VIBRANOVSKI, MARIA D. ; CHEN, SIDI ; ZHANG, YONG E. ; LONG, MANYUAN. Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development. PLoS Genetics. v. 17, p. e1009654, 2021. Qualis: A1
237.	XU, TIANHAO ; SCHUTTE, ALEXANDER ; JIMENEZ, LEANDRO ; GONÇALVES, ANDRE N. A. ; KELLER, ASHLEIGH ; PIPKIN, MATTHEW E. ; Nakaya, Helder I. ; PEREIRA, RENATA M. ; MARTINEZ, GUSTAVO J.. Kdm6b Regulates the Generation of Effector CD8 + T Cells by Inducing Chromatin Accessibility in Effector-Associated Genes. JOURNAL OF IMMUNOLOGY. v. 206, p. 2170-2183, 2021. Qualis: C
238.	Zevallos RAC ; REIS, E.M.. Noncoding gene families of the human genome. Em: Luciana Amaral Haddad. (Org.). Human Genome Structure, Function and Clinical Considerations. 1ed. : Springer. 2021.v. 1, p. 139-180.
239.	ZUCCOLI, GIULIANA S. ; REIS-DE-OLIVEIRA, GUILHERME ; GARBES, BRUNA ; FALKAI, PETER ; SCHMITT, ANDREA ; Nakaya, Helder I. ; MARTINS-DE-SOUZA, DANIEL. Linking proteomic alterations in schizophrenia hippocampus to NMDAr hypofunction in human neurons and oligodendrocytes. EUROPEAN ARCHIVES OF PSYCHIATRY AND CLINICAL NEUROSCIENCE. v. 1, p. 1, 2021. Qualis: A2

1.	ADHIKARI, K. ; Reales, G. ; SMITH, A. ; KONCA, E. ; PALMEN, J. ; QUINTO-SANCHEZ, M. ; ACUNA-ALONZO, V. ; JARAMILLO, C. ; ARIAS, W. ; FUENTES, M. ; PIZARRO, M. ; MACIN, G. ; BARQUERA, R. ; GOMEZ-VALDES, J. ; VILLAMIL-RAMIREZ, H. ; HÜNEMEIER, T. ; RAMALLO, V. ; CERQUEIRA, C. C. S. ; GRANJA, V. ; HURTADO, M. ; et.al. A genome-wide association study identifies multiple loci for variation in human ear morphology. Nature Communications. v. 6, p. 7500, 2015. Qualis: A1
2.	AKONDY, RAMA S. ; JOHNSON, PHILIP L. F. ; Nakaya, Helder I. ; EDUPUGANTI, SRILATHA ; MULLIGAN, MARK J. ; LAWSON, BENTON ; MILLER, JOSEPH D. ; Pulendran, Bali ; ANTIA, RUSTOM ; Ahmed, Rafi. Initial viral load determines the magnitude of the human CD8 T cell response to yellow fever vaccination. Proceedings of the National Academy of Sciences of the United States of America. v. 112, p. 3050-3055, 2015. Qualis: A1
3.	ALEXANDRINO, P. ; MENDONCA, T. ; BAUTISTA, L. ; CHERIX, J. ; LOZANO-SAKALAUSKAS, G. ; FUJITA, A. ; RAMOS FILHO, E. ; LONG, P. ; PADILLA, G. ; TACIRO, M. ; GOMEZ, J. G. ; SILVA, L.. Draft Genome Sequence of the Polyhydroxyalkanoate-producing Bacterium Burkholderia sacchari LMG 19450 Isolated from Brazilian Sugarcane Plantation Soil. Genome Announcements. v. 3, p. e00313-15, 2015. Qualis: B3
4.	ALMEIDA, JULIANA ; AZEVEDO, MARIANA DA SILVA ; SPICHER, LIVIA ; GLAUSER, GAÉTAN ; VOM DORP, KATHARINA ; GUYER, LUZIA ; DEL VALLE CARRANZA, ANDREA ; ASIS, RAMÓN ; De Souza, Amanda Pereira ; BUCKERIDGE, MARCOS ; DEMARCO, DIEGO ; BRES, CÉCILE ; ROTHAN, CHRISTOPHE ; PERES, LÁZARO EUSTÁQUIO PEREIRA ; HÖRTENSTEINER, STEFAN ; KESSLER, FÉLIX ; DÖRMANN, PETER ; CARRARI, FERNANDO ; ROSSI, MAGDALENA. Down-regulation of tomato PHYTOL KINASE strongly impairs tocopherol biosynthesis and affects prenyllipid metabolism in an organ-specific manner. Journal of Experimental Botany. v. 67, p. erv504, 2015. Qualis: A1
5.	ALVEZ, W. A. L. ; MORIMITSU, ALEXANDRE ; HASHIMOTO, RONALDO FUMIO. Scale-Space Representation Based on Levelings Through Hierarchies of Level Sets. Em: International Symposium on Mathematical Morphology, v. 9082, p. 265-276, 2015.Qualis: Não identificado (International Symposium on Mathematical Morphology)
6.	Amorim, CEG ; ACUNA-ALONZO, V. ; SALZANO, F. M. ; BORTOLINI, M. C. ; HÜNEMEIER, T.. *Differing Evolutionary Histories of the ACTN3R577X Polymorphism among the Major Human Geographic Groups. Plos One. v. 10, p. e0115449, 2015. Qualis: A1**
7.	Anderson, Letícia ; AMARAL, MURILO S. ; BECKEDORFF, FELIPE ; SILVA, LUCAS F. ; Dazzani, Bianca ; Oliveira, Katia C. ; Almeida, Giulliana T. ; GOMES, MONETE R. ; PIRES, DAVID S. ; SETUBAL, JOÃO C. ; DEMARCO, Ricardo ; Verjovski-Almeida, Sergio. Schistosoma mansoni Egg, Adult Male and Female Comparative Gene Expression Analysis and Identification of Novel Genes by RNA-Seq. PLoS Neglected Tropical Diseases (Online). v. 9, p. e0004334, 2015. Qualis: A1
8.	ANDRADE-LIMA, L. C. ; ANDRADE, L. N. ; Menck, C. F. M.. ATR suppresses apoptosis after UVB irradiation by controlling both translesion synthesis and alternative tolerance pathways. Journal of Cell Science. v. 128, p. 150-159, 2015. Qualis: A1
9.	ANDRADE-LIMA, L. C. ; VELOSO, A. ; PAULSEN, M. T. ; Menck, C. F. M. ; LJUNGMAN, M.. DNA repair and recovery of RNA synthesis following exposure to ultraviolet light are delayed in long genes. Nucleic Acids Research. v. 43, p. 2744-2756, 2015. Qualis: A1
10.	ANNETTA, F. B. ; TAHIRA, A. C. ; BRENTANI, H. P. ; MACHADO-LIMA, A.. Study of the relationship between microRNAs in sex chromosomes and differential expression in autosomes of the human brain i different periods of the development. Em: X-Meeting 2015 - 11th International Conference of th AB3C + Brazilian Symposium of Bioinformatics, 2015. Proceedings X-Meeting 2015, p. 223-223, 2015.
11.	ARNS, T. C. ; TAMAROZZI, E. R. ; TORRIERI, E. ; GIULIATTI, S ; DONADI, E. A.. In silico Modelling and Molecular Dynamics of Nonclassical Major Histocompatibility Complex Class I HLA-G Protein. Em: 10th International Congress of Pharmaceutical Sciences (CIFARP), 2015, Ribeirão Preto, SP. Abstracts, v. 1, p. 1-1, 2015.
12.	AYUPE, ANA C ; Tahira, Ana C ; CAMARGO, Lauren ; BECKEDORFF, FELIPE C ; VERJOVSKI-ALMEIDA, Sergio ; Reis, Eduardo M ; REIS, EM. Global analysis of biogenesis, stability and sub-cellular localization of lncRNAs mapping to intragenic regions of the human genome. RNA Biology. v. 12, p. 877-892, 2015. Qualis: A2
13.	AZEVEDO, S. ; BORTOLINI, M. C. ; BONATTO, S. L. ; HÜNEMEIER, T. ; SANTOS, F. ; GONZALEZ-JOSE, R.. Ancient remains and the first peopling of the Americas: Reassessing the Hoyo Negro skull. American Journal of Physical Anthropology,. p. n/a-n/a, 2015. Qualis: A2 (AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY)
14.	BARAU, J. ; GRANDIS, A. ; CARVALHO, V. M. D. A. ; TEIXEIRA, G. S. ; ZAPAROLI, G. H. A. ; DO RIO, M. C. S. ; RINCONES, J. ; BUCKERIDGE, M. S. ; PEREIRA, G. A. G.. Apoplastic and intracellular plant sugars regulate developmental transitions in witches' broom disease of cacao. Journal of Experimental Botany. v. 66, p. 1325-1337, 2015. Qualis: A1
15.	Barroso da Silva, Fernando L. Palestra convidada: Bioinformática Estrutural: Aspectos físicos, computacionais e seus desafios. 2015. Apresentação de Trabalho/Outra
16.	Barroso da Silva, Fernando Luís. Palestra convidada: Protein complexation driven by electrostatic interactions (PUC/Chile). 2015. Apresentação de Trabalho/Simpósio
17.	Barroso da Silva, Fernando Luís. Palestra convidada: The Laboratory of Computational Biophysical Chemistry: Molecular interactions and nanobiological applications for functionalized (bio)material developments (Pasteur/Montevideo). 2015. Apresentação de Trabalho/Simpósio
18.	Barroso da Silva, Fernando Luís. Palestra convidada: Complexação de proteínas: de interações eletrostáticas a aplicações (EBMM-UFABC). 2015. Apresentação de Trabalho/Outra
19.	Barroso da Silva, Fernando Luís. Palestra convidada: Modelagem Molecular de Complexos Proteicos: Buscando o Entendimento Fundamental de Processos Biotecnológicos, de Doenças e Novos Materiais Funcionalizados (FMRP/USP). 2015. Apresentação de Trabalho/Simpósio
20.	Bisso-Machado, R ; RAMALLO, V. ; PAIXAO-CORTES, V. R. ; DEMARCHI, D. A. ; SANDOVAL, J. R. S. ; GRANARA, A. A. S. ; SALZANO, F. M. ; HÜNEMEIER, T. ; BORTOLINI, M. C.. NAT2 gene diversity and its evolutionary trajectory in the Americas. Pharmacogenomics Journal (Print),. p. 000-000, 2015. Qualis: A2 (PHARMACOGENOMICS JOURNAL)
21.	BOQUETT, J. ; SCHULER-FACCINI, L. ; JOBIM, L. F. ; JOBIM, M. ; FAGUNDES, N. J. R. ; HÜNEMEIER, T.. Self-assessment of Colour Categories and its Relationship with HLA profiling in Brazilian Bone Marrow Donors. Biology of Blood and Marrow Transplantation,. p. n/a-n/a, 2015. Qualis: A1 (BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION)
22.	BORIN, GUSTAVO PAGOTTO ; SANCHEZ, CAMILA CRISTINA ; De Souza, Amanda Pereira ; DE SANTANA, ELIANE SILVA ; DE SOUZA, ALINE TIEPPO ; LEME, ADRIANA FRANCO PAES ; SQUINA, FABIO MARCIO ; BUCKERIDGE, MARCOS ; Goldman, Gustavo Henrique ; OLIVEIRA, JULIANA VELASCO DE CASTRO. Comparative Secretome Analysis of Trichoderma reesei and Aspergillus niger during Growth on Sugarcane Biomass. Plos One. v. 10, p. e0129275, 2015. Qualis: A1
23.	BRENTANI, H. P.. Autismo. 2015. Apresentação de Trabalho/Outra
24.	BRITO, ANDERSON FERNANDES DE ; BRACONI, CARLA TORRES ; WEIDMANN, MANFRED ; DILCHER, MEIK ; ALVES, JOÃO MARCELO PEREIRA ; GRUBER, ARTHUR ; ZANOTTO, PAOLO MARINHO DE ANDRADE. The pangenome of the Anticarsia gemmatalis multiple nucleopolyhedrovirus (AgMNPV). Genome Biology and Evolution. v. 12, p. evv231, 2015. Qualis: A1
25.	Buckerdge, M.S. Environmental impacts of the biofuels production. 2015. Apresentação de Trabalho/Conferência ou palestra
26.	BUCKERIDGE, M. S. The cell wall of sugarcane: what do we know. 2015. Apresentação de Trabalho/Conferência ou palestra
27.	BUCKERIDGE, M. S. Infraestrutura verde. 2015. Apresentação de Trabalho/Seminário
28.	BUCKERIDGE, M. S. Mudanças climáticas globais - causas, mitigação e adaptação. 2015. Apresentação de Trabalho/Outra
29.	BUCKERIDGE, M. S. Using systems and synthetic biology to tailor plant cell wall for a better future (Part II). 2015. Apresentação de Trabalho/Conferência ou palestra
30.	BUCKERIDGE, M. S. Breaking the glycomic code of plant cell walls to improve bioenergy production. 2015. Apresentação de Trabalho/Conferência ou palestra
31.	BUCKERIDGE, M. S. The Glycomic Code: How the complex metabolic network of polysaccharides in plant cells generates a code that support life on Earth. 2015. Apresentação de Trabalho/Conferência ou palestra

Programa de Pós Graduação em Bioinformática

Total de produção bibliográfica

2021

2020

2019

2018

2017

2016

2015